RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 PLBD2Q8NHP8 589 aa3.95□□□□□ -1.78
LAPTM4A-202ENST00000483117 RP9Q8TA86 221 aaKnown RBP3.95□□□□□ -1.78
LAPTM4A-202ENST00000483117 RITA1Q96K30 269 aa3.95□□□□□ -1.78
LAPTM4A-202ENST00000483117 ASB2Q96Q27 587 aa3.95□□□□□ -1.78
LAPTM4A-202ENST00000483117 SARS2Q9NP81 518 aaKnown RBP3.95□□□□□ -1.78
LAPTM4A-202ENST00000483117 ELOVL5Q9NYP7 299 aa3.95□□□□□ -1.78
LAPTM4A-202ENST00000483117 XPR1Q9UBH6 696 aa3.95□□□□□ -1.78
LAPTM4A-202ENST00000483117 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.95□□□□□ -1.785e-8■□□□□ 8.7
LAPTM4A-202ENST00000483117 PPEF2O14830 753 aa3.94□□□□□ -1.78
LAPTM4A-202ENST00000483117 EXOC3O60645 756 aa3.94□□□□□ -1.78
LAPTM4A-202ENST00000483117 CSF1RP07333 972 aa3.94□□□□□ -1.78
LAPTM4A-202ENST00000483117 ADORA2AP29274 412 aa3.94□□□□□ -1.78
LAPTM4A-202ENST00000483117 VIPR2P41587 438 aa3.94□□□□□ -1.78
LAPTM4A-202ENST00000483117 UCP3P55916 312 aa3.94□□□□□ -1.78
LAPTM4A-202ENST00000483117 TPTEP56180 551 aa3.94□□□□□ -1.78
LAPTM4A-202ENST00000483117 GPSM2P81274 684 aa3.94□□□□□ -1.78
LAPTM4A-202ENST00000483117 ZIK1Q3SY52 487 aaPredicted RBP3.94□□□□□ -1.78
LAPTM4A-202ENST00000483117 BRDTQ58F21 947 aaPredicted RBP3.94□□□□□ -1.78
LAPTM4A-202ENST00000483117 MIS18BP1Q6P0N0 1132 aa3.94□□□□□ -1.78
LAPTM4A-202ENST00000483117 ZBTB46Q86UZ6 589 aa3.94□□□□□ -1.78
LAPTM4A-202ENST00000483117 GALNT16Q8N428 558 aa3.94□□□□□ -1.78
LAPTM4A-202ENST00000483117 CDK5RAP3Q96JB5 506 aa3.94□□□□□ -1.78
LAPTM4A-202ENST00000483117 LENG8Q96PV6 779 aaPredicted RBP3.94□□□□□ -1.78
LAPTM4A-202ENST00000483117 CGRRF1Q99675 332 aa3.94□□□□□ -1.78
LAPTM4A-202ENST00000483117 PRSS22Q9GZN4 317 aa3.94□□□□□ -1.78
LAPTM4A-202ENST00000483117 VPS16Q9H269 839 aa3.94□□□□□ -1.78
LAPTM4A-202ENST00000483117 CXorf36Q9H7Y0 433 aa3.94□□□□□ -1.78
LAPTM4A-202ENST00000483117 PCDH12Q9NPG4 1184 aa3.94□□□□□ -1.78
LAPTM4A-202ENST00000483117 ANLNQ9NQW6 1124 aa3.94□□□□□ -1.78
LAPTM4A-202ENST00000483117 STAP2Q9UGK3 403 aa3.94□□□□□ -1.78
LAPTM4A-202ENST00000483117 CPA4Q9UI42 421 aa3.94□□□□□ -1.78
LAPTM4A-202ENST00000483117 SHOC2Q9UQ13 582 aa3.94□□□□□ -1.78
LAPTM4A-202ENST00000483117 COL4A3BPQ9Y5P4 624 aa3.94□□□□□ -1.78
LAPTM4A-202ENST00000483117 IKBKBO14920 756 aa3.93□□□□□ -1.78
LAPTM4A-202ENST00000483117 VNN1O95497 513 aa3.93□□□□□ -1.78
LAPTM4A-202ENST00000483117 AKAP5P24588 427 aa3.93□□□□□ -1.78
LAPTM4A-202ENST00000483117 MMP13P45452 471 aa3.93□□□□□ -1.78
LAPTM4A-202ENST00000483117 MYO1EQ12965 1108 aa3.93□□□□□ -1.78
LAPTM4A-202ENST00000483117 DAZAP2Q15038 168 aaPredicted RBP3.93□□□□□ -1.78
LAPTM4A-202ENST00000483117 RABEP1Q15276 862 aa3.93□□□□□ -1.78
LAPTM4A-202ENST00000483117 LY6KQ17RY6 165 aa3.93□□□□□ -1.78
LAPTM4A-202ENST00000483117 L1TD1Q5T7N2 865 aaKnown RBP3.93□□□□□ -1.78
LAPTM4A-202ENST00000483117 KIRREL2Q6UWL6 708 aa3.93□□□□□ -1.78
LAPTM4A-202ENST00000483117 DPY19L3Q6ZPD9 716 aa3.93□□□□□ -1.78
LAPTM4A-202ENST00000483117 GRAMD1CQ8IYS0 662 aa3.93□□□□□ -1.78
LAPTM4A-202ENST00000483117 TERB1Q8NA31 727 aa3.93□□□□□ -1.78
LAPTM4A-202ENST00000483117 HPS3Q969F9 1004 aa3.93□□□□□ -1.78
LAPTM4A-202ENST00000483117 DAZAP1Q96EP5 407 aaKnown RBP3.93□□□□□ -1.78
LAPTM4A-202ENST00000483117 MOGAT1Q96PD6 335 aa3.93□□□□□ -1.78
LAPTM4A-202ENST00000483117 THAP7Q9BT49 309 aaPredicted RBP3.93□□□□□ -1.78
LAPTM4A-202ENST00000483117 HOMER2Q9NSB8 354 aa3.93□□□□□ -1.78
LAPTM4A-202ENST00000483117 KLHL13Q9P2N7 655 aa3.93□□□□□ -1.78
LAPTM4A-202ENST00000483117 IP6K2Q9UHH9 426 aa3.93□□□□□ -1.78
LAPTM4A-202ENST00000483117 STXBP5LQ9Y2K9 1186 aa3.93□□□□□ -1.78
LAPTM4A-202ENST00000483117 TMX2Q9Y320 296 aa3.93□□□□□ -1.78
LAPTM4A-202ENST00000483117 WDR17Q8IZU2 1322 aa3.93□□□□□ -1.78
LAPTM4A-202ENST00000483117 CACNA1IQ9P0X4 2223 aa3.93□□□□□ -1.78
LAPTM4A-202ENST00000483117 CYP2D7A0A087X1C5 515 aa3.92□□□□□ -1.78
LAPTM4A-202ENST00000483117 H7C1Q1 480 aa3.92□□□□□ -1.78
LAPTM4A-202ENST00000483117 TJP3O95049 919 aa3.92□□□□□ -1.78
LAPTM4A-202ENST00000483117 NCLP19338 710 aaKnown RBP3.92□□□□□ -1.78
LAPTM4A-202ENST00000483117 FPR3P25089 353 aa3.92□□□□□ -1.78
LAPTM4A-202ENST00000483117 LRPAP1P30533 357 aa3.92□□□□□ -1.78
LAPTM4A-202ENST00000483117 NR4A2P43354 598 aa3.92□□□□□ -1.78
LAPTM4A-202ENST00000483117 SLC11A2P49281 568 aa3.92□□□□□ -1.78
LAPTM4A-202ENST00000483117 CCT4P50991 539 aaKnown RBP3.92□□□□□ -1.78
LAPTM4A-202ENST00000483117 PDE6CP51160 858 aa3.92□□□□□ -1.78
LAPTM4A-202ENST00000483117 ALDH5A1P51649 535 aaPredicted RBP3.92□□□□□ -1.78
LAPTM4A-202ENST00000483117 ZNF267Q14586 743 aaPredicted RBP3.92□□□□□ -1.78
LAPTM4A-202ENST00000483117 CYP1B1Q16678 543 aa3.92□□□□□ -1.78
LAPTM4A-202ENST00000483117 TBC1D25Q3MII6 688 aa3.92□□□□□ -1.78
LAPTM4A-202ENST00000483117 Q4G0T1 1027 aa3.92□□□□□ -1.78
LAPTM4A-202ENST00000483117 LCE1EQ5T753 118 aa3.92□□□□□ -1.78
LAPTM4A-202ENST00000483117 TECPR1Q7Z6L1 1165 aa3.92□□□□□ -1.78
LAPTM4A-202ENST00000483117 SLC15A3Q8IY34 581 aa3.92□□□□□ -1.78
LAPTM4A-202ENST00000483117 ABHD11Q8NFV4 315 aa3.92□□□□□ -1.78
LAPTM4A-202ENST00000483117 SOCS4Q8WXH5 440 aa3.92□□□□□ -1.78
LAPTM4A-202ENST00000483117 CHMP4CQ96CF2 233 aa3.92□□□□□ -1.78
LAPTM4A-202ENST00000483117 MRGPRX1Q96LB2 322 aa3.92□□□□□ -1.78
LAPTM4A-202ENST00000483117 MAP3K14Q99558 947 aa3.92□□□□□ -1.78
LAPTM4A-202ENST00000483117 P2RX7Q99572 595 aaKnown RBP3.92□□□□□ -1.78
LAPTM4A-202ENST00000483117 DPCDQ9BVM2 203 aaPredicted RBP3.92□□□□□ -1.78
LAPTM4A-202ENST00000483117 CIPCQ9C0C6 399 aa3.92□□□□□ -1.78
LAPTM4A-202ENST00000483117 TUBA8Q9NY65 449 aaPredicted RBP3.92□□□□□ -1.78
LAPTM4A-202ENST00000483117 GABRQQ9UN88 632 aa3.92□□□□□ -1.78
LAPTM4A-202ENST00000483117 MED16Q9Y2X0 877 aa3.92□□□□□ -1.78
LAPTM4A-202ENST00000483117 POC1B-GALNT4F8VUJ3 575 aa3.91□□□□□ -1.78
LAPTM4A-202ENST00000483117 AP4M1O00189 453 aa3.91□□□□□ -1.78
LAPTM4A-202ENST00000483117 KCNAB3O43448 404 aa3.91□□□□□ -1.78
LAPTM4A-202ENST00000483117 BCAR3O75815 825 aa3.91□□□□□ -1.78
LAPTM4A-202ENST00000483117 NTN1O95631 604 aa3.91□□□□□ -1.78
LAPTM4A-202ENST00000483117 PF4V1P10720 104 aa3.91□□□□□ -1.78
LAPTM4A-202ENST00000483117 CYP2A6P11509 494 aaPredicted RBP3.91□□□□□ -1.78
LAPTM4A-202ENST00000483117 RENBPP51606 427 aa3.91□□□□□ -1.78
LAPTM4A-202ENST00000483117 E2F1Q01094 437 aa3.91□□□□□ -1.78
LAPTM4A-202ENST00000483117 FHL1Q13642 323 aa3.91□□□□□ -1.78
LAPTM4A-202ENST00000483117 GTF2H3Q13889 308 aa3.91□□□□□ -1.78
LAPTM4A-202ENST00000483117 RNASE12Q5GAN4 147 aaKnown RBP3.91□□□□□ -1.78
LAPTM4A-202ENST00000483117 ATAT1Q5SQI0 421 aa3.91□□□□□ -1.78
LAPTM4A-202ENST00000483117 AWAT2Q6E213 333 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms