RNA–Protein interactions for RNA: ENST00000482632.5

SPTLC1-206, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 837 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-206ENST00000482632 ATP8B3O60423 1300 aa10.65□□□□□ -0.7
SPTLC1-206ENST00000482632 GREB1Q4ZG55 1949 aa10.65□□□□□ -0.7
SPTLC1-206ENST00000482632 N4BP1O75113 896 aaKnown RBP10.65□□□□□ -0.7
SPTLC1-206ENST00000482632 HAPLN1P10915 354 aaPredicted RBP10.65□□□□□ -0.7
SPTLC1-206ENST00000482632 CD46P15529 392 aa10.65□□□□□ -0.7
SPTLC1-206ENST00000482632 GJA1P17302 382 aa10.65□□□□□ -0.7
SPTLC1-206ENST00000482632 CEBPBP17676 345 aa10.65□□□□□ -0.7
SPTLC1-206ENST00000482632 PTPN1P18031 435 aaKnown RBP10.65□□□□□ -0.7
SPTLC1-206ENST00000482632 ANXA13P27216 316 aa10.65□□□□□ -0.7
SPTLC1-206ENST00000482632 GRIK1P39086 918 aa10.65□□□□□ -0.7
SPTLC1-206ENST00000482632 NDST1P52848 882 aa10.65□□□□□ -0.7
SPTLC1-206ENST00000482632 ENPEPQ07075 957 aa10.65□□□□□ -0.7
SPTLC1-206ENST00000482632 IFRD2Q12894 506 aaPredicted RBP10.65□□□□□ -0.7
SPTLC1-206ENST00000482632 STX1AQ16623 288 aa10.65□□□□□ -0.7
SPTLC1-206ENST00000482632 DDR2Q16832 855 aa10.65□□□□□ -0.7
SPTLC1-206ENST00000482632 SLC5A9Q2M3M2 681 aa10.65□□□□□ -0.7
SPTLC1-206ENST00000482632 ZNF394Q53GI3 561 aa10.65□□□□□ -0.7
SPTLC1-206ENST00000482632 ACOT1Q86TX2 421 aa10.65□□□□□ -0.7
SPTLC1-206ENST00000482632 FAM114A1Q8IWE2 563 aa10.65□□□□□ -0.7
SPTLC1-206ENST00000482632 B3GALNT2Q8NCR0 500 aa10.65□□□□□ -0.7
SPTLC1-206ENST00000482632 SLC35C1Q96A29 364 aa10.65□□□□□ -0.7
SPTLC1-206ENST00000482632 MCRS1Q96EZ8 462 aa10.65□□□□□ -0.7
SPTLC1-206ENST00000482632 TNIP3Q96KP6 325 aa10.65□□□□□ -0.7
SPTLC1-206ENST00000482632 C1QTNF1Q9BXJ1 281 aa10.65□□□□□ -0.7
SPTLC1-206ENST00000482632 DNAI2Q9GZS0 605 aa10.65□□□□□ -0.7
SPTLC1-206ENST00000482632 VRTNQ9H8Y1 702 aa10.65□□□□□ -0.7
SPTLC1-206ENST00000482632 CRTAC1Q9NQ79 661 aa10.65□□□□□ -0.7
SPTLC1-206ENST00000482632 FAM49BQ9NUQ9 324 aa10.65□□□□□ -0.7
SPTLC1-206ENST00000482632 USTQ9Y2C2 406 aa10.65□□□□□ -0.7
SPTLC1-206ENST00000482632 A0A1W2PRU2 124 aa10.64□□□□□ -0.71
SPTLC1-206ENST00000482632 CLDN5O00501 218 aa10.64□□□□□ -0.71
SPTLC1-206ENST00000482632 ZNF197O14709 1029 aa10.64□□□□□ -0.71
SPTLC1-206ENST00000482632 DCXO43602 365 aa10.64□□□□□ -0.71
SPTLC1-206ENST00000482632 AFPP02771 609 aaKnown RBP10.64□□□□□ -0.71
SPTLC1-206ENST00000482632 POU2F2P09086 479 aa10.64□□□□□ -0.71
SPTLC1-206ENST00000482632 ATF6P18850 670 aa10.64□□□□□ -0.71
SPTLC1-206ENST00000482632 GABRR2P28476 465 aa10.64□□□□□ -0.71
SPTLC1-206ENST00000482632 ASPAP45381 313 aa10.64□□□□□ -0.71
SPTLC1-206ENST00000482632 RPL10AP62906 217 aaKnown RBP10.64□□□□□ -0.71
SPTLC1-206ENST00000482632 KCNH2Q12809 1159 aa10.64□□□□□ -0.71
SPTLC1-206ENST00000482632 SWT1Q5T5J6 900 aaKnown RBP10.64□□□□□ -0.71
SPTLC1-206ENST00000482632 LIMS2Q7Z4I7 341 aa10.64□□□□□ -0.71
SPTLC1-206ENST00000482632 MYCBPAPQ8TBZ2 947 aa10.64□□□□□ -0.71
SPTLC1-206ENST00000482632 FGF13Q92913 245 aa10.64□□□□□ -0.71
SPTLC1-206ENST00000482632 PCED1BQ96HM7 432 aa10.64□□□□□ -0.71
SPTLC1-206ENST00000482632 DNAJC25Q9H1X3 360 aa10.64□□□□□ -0.71
SPTLC1-206ENST00000482632 ZNF334Q9HCZ1 680 aaPredicted RBP10.64□□□□□ -0.71
SPTLC1-206ENST00000482632 ANO10Q9NW15 660 aa10.64□□□□□ -0.71
SPTLC1-206ENST00000482632 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.64□□□□□ -0.719e-8■■■■■ 27
SPTLC1-206ENST00000482632 TMEM63CQ9P1W3 806 aa10.64□□□□□ -0.71
SPTLC1-206ENST00000482632 HMGXB4Q9UGU5 601 aa10.64□□□□□ -0.71
SPTLC1-206ENST00000482632 CDH7Q9ULB5 785 aa10.64□□□□□ -0.71
SPTLC1-206ENST00000482632 HCN4Q9Y3Q4 1203 aa10.64□□□□□ -0.71
SPTLC1-206ENST00000482632 ASB3Q9Y575 518 aa10.64□□□□□ -0.71
SPTLC1-206ENST00000482632 NME7Q9Y5B8 376 aa10.64□□□□□ -0.71
SPTLC1-206ENST00000482632 FAM86C2PA6NEL3 165 aa10.63□□□□□ -0.71
SPTLC1-206ENST00000482632 CCDC130P13994 396 aa10.63□□□□□ -0.71
SPTLC1-206ENST00000482632 PTMSP20962 102 aa10.63□□□□□ -0.71
SPTLC1-206ENST00000482632 ADORA2BP29275 332 aa10.63□□□□□ -0.71
SPTLC1-206ENST00000482632 CYP4F8P98187 520 aa10.63□□□□□ -0.71
SPTLC1-206ENST00000482632 MTMR3Q13615 1198 aa10.63□□□□□ -0.71
SPTLC1-206ENST00000482632 TEAD2Q15562 447 aa10.63□□□□□ -0.71
SPTLC1-206ENST00000482632 ARHGAP15Q53QZ3 475 aa10.63□□□□□ -0.71
SPTLC1-206ENST00000482632 FAM171BQ6P995 826 aa10.63□□□□□ -0.71
SPTLC1-206ENST00000482632 FOXR2Q6PJQ5 311 aa10.63□□□□□ -0.71
SPTLC1-206ENST00000482632 C11orf57Q6ZUT1 292 aaPredicted RBP10.63□□□□□ -0.71
SPTLC1-206ENST00000482632 DNAJB7Q7Z6W7 309 aaPredicted RBP10.63□□□□□ -0.71
SPTLC1-206ENST00000482632 TRIM59Q8IWR1 403 aa10.63□□□□□ -0.71
SPTLC1-206ENST00000482632 NPAS3Q8IXF0 933 aa10.63□□□□□ -0.71
SPTLC1-206ENST00000482632 ZDHHC14Q8IZN3 488 aa10.63□□□□□ -0.71
SPTLC1-206ENST00000482632 PPM1KQ8N3J5 372 aa10.63□□□□□ -0.71
SPTLC1-206ENST00000482632 LEMD2Q8NC56 503 aa10.63□□□□□ -0.71
SPTLC1-206ENST00000482632 TTC16Q8NEE8 873 aa10.63□□□□□ -0.71
SPTLC1-206ENST00000482632 RSAD2Q8WXG1 361 aa10.63□□□□□ -0.71
SPTLC1-206ENST00000482632 PSMG2Q969U7 264 aa10.63□□□□□ -0.71
SPTLC1-206ENST00000482632 JAKMIP2Q96AA8 810 aa10.63□□□□□ -0.71
SPTLC1-206ENST00000482632 FUBP3Q96I24 572 aaKnown RBP eCLIP10.63□□□□□ -0.71
SPTLC1-206ENST00000482632 NT5C1BQ96P26 610 aa10.63□□□□□ -0.71
SPTLC1-206ENST00000482632 PKMYT1Q99640 499 aa10.63□□□□□ -0.71
SPTLC1-206ENST00000482632 ARID3AQ99856 593 aa10.63□□□□□ -0.71
SPTLC1-206ENST00000482632 KXD1Q9BQD3 176 aa10.63□□□□□ -0.71
SPTLC1-206ENST00000482632 NT5C1AQ9BXI3 368 aa10.63□□□□□ -0.71
SPTLC1-206ENST00000482632 B3GNT5Q9BYG0 378 aa10.63□□□□□ -0.71
SPTLC1-206ENST00000482632 BCO2Q9BYV7 579 aa10.63□□□□□ -0.71
SPTLC1-206ENST00000482632 ZNF518BQ9C0D4 1074 aa10.63□□□□□ -0.71
SPTLC1-206ENST00000482632 ELOVL4Q9GZR5 314 aa10.63□□□□□ -0.71
SPTLC1-206ENST00000482632 ATXN3LQ9H3M9 355 aa10.63□□□□□ -0.71
SPTLC1-206ENST00000482632 THAP9Q9H5L6 903 aa10.63□□□□□ -0.71
SPTLC1-206ENST00000482632 CYP3A43Q9HB55 503 aa10.63□□□□□ -0.71
SPTLC1-206ENST00000482632 ABCB6Q9NP58 842 aa10.63□□□□□ -0.71
SPTLC1-206ENST00000482632 KRT82Q9NSB4 513 aa10.63□□□□□ -0.71
SPTLC1-206ENST00000482632 HSFX1Q9UBD0 423 aa10.63□□□□□ -0.71
SPTLC1-206ENST00000482632 NUP210Q8TEM1 1887 aaPredicted RBP10.63□□□□□ -0.71
SPTLC1-206ENST00000482632 ANAPC1Q9H1A4 1944 aa10.62□□□□□ -0.71
SPTLC1-206ENST00000482632 SLC38A8A6NNN8 435 aa10.62□□□□□ -0.71
SPTLC1-206ENST00000482632 F8VP50 259 aa10.62□□□□□ -0.71
SPTLC1-206ENST00000482632 HRO43593 1189 aa10.62□□□□□ -0.71
SPTLC1-206ENST00000482632 AP1G2O75843 785 aa10.62□□□□□ -0.71
SPTLC1-206ENST00000482632 ABL1P00519 1130 aa10.62□□□□□ -0.71
SPTLC1-206ENST00000482632 FAM163BP0C2L3 166 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms