RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 MAP3K7CLP57077 242 aa14.03□□□□□ -0.16
HDAC1-208ENST00000482310 PTK2Q05397 1052 aa14.03□□□□□ -0.16
HDAC1-208ENST00000482310 TWF1Q12792 350 aa14.03□□□□□ -0.16
HDAC1-208ENST00000482310 DDR2Q16832 855 aa14.03□□□□□ -0.16
HDAC1-208ENST00000482310 PPM1LQ5SGD2 360 aa14.03□□□□□ -0.16
HDAC1-208ENST00000482310 RARS2Q5T160 578 aaKnown RBP14.03□□□□□ -0.16
HDAC1-208ENST00000482310 SFMBT2Q5VUG0 894 aa14.03□□□□□ -0.16
HDAC1-208ENST00000482310 E4F1Q66K89 784 aaPredicted RBP14.03□□□□□ -0.16
HDAC1-208ENST00000482310 PAQR9Q6ZVX9 377 aa14.03□□□□□ -0.16
HDAC1-208ENST00000482310 ZNF397Q8NF99 534 aaPredicted RBP14.03□□□□□ -0.16
HDAC1-208ENST00000482310 SPPL2BQ8TCT7 592 aa14.03□□□□□ -0.16
HDAC1-208ENST00000482310 SMARCD1Q96GM5 515 aa14.03□□□□□ -0.16
HDAC1-208ENST00000482310 CDCA3Q99618 268 aaPredicted RBP14.03□□□□□ -0.16
HDAC1-208ENST00000482310 ZSWIM1Q9BR11 485 aa14.03□□□□□ -0.16
HDAC1-208ENST00000482310 PDCL3Q9H2J4 239 aa14.03□□□□□ -0.16
HDAC1-208ENST00000482310 TMEM30AQ9NV96 361 aa14.03□□□□□ -0.16
HDAC1-208ENST00000482310 CNTN6Q9UQ52 1028 aa14.03□□□□□ -0.16
HDAC1-208ENST00000482310 LUC7L2Q9Y383 392 aaKnown RBP14.03□□□□□ -0.16
HDAC1-208ENST00000482310 DAAM1Q9Y4D1 1078 aa14.03□□□□□ -0.16
HDAC1-208ENST00000482310 INSL5Q9Y5Q6 135 aa14.03□□□□□ -0.16
HDAC1-208ENST00000482310 F8VP50 259 aa14.02□□□□□ -0.17
HDAC1-208ENST00000482310 PIK3R2O00459 728 aa14.02□□□□□ -0.17
HDAC1-208ENST00000482310 TBX10O75333 385 aa14.02□□□□□ -0.17
HDAC1-208ENST00000482310 BEST1O76090 585 aa14.02□□□□□ -0.17
HDAC1-208ENST00000482310 LRG1P02750 347 aa14.02□□□□□ -0.17
HDAC1-208ENST00000482310 FAM200BP0CF97 657 aa14.02□□□□□ -0.17
HDAC1-208ENST00000482310 HAPLN1P10915 354 aaPredicted RBP14.02□□□□□ -0.17
HDAC1-208ENST00000482310 SKILP12757 684 aa14.02□□□□□ -0.17
HDAC1-208ENST00000482310 CYP11B1P15538 503 aa14.02□□□□□ -0.17
HDAC1-208ENST00000482310 ANXA13P27216 316 aa14.02□□□□□ -0.17
HDAC1-208ENST00000482310 KRT9P35527 623 aa14.02□□□□□ -0.17
HDAC1-208ENST00000482310 DLX2Q07687 328 aaPredicted RBP14.02□□□□□ -0.17
HDAC1-208ENST00000482310 TRIM14Q14142 442 aa14.02□□□□□ -0.17
HDAC1-208ENST00000482310 TDRD12Q587J7 1177 aaKnown RBP14.02□□□□□ -0.17
HDAC1-208ENST00000482310 FIGNQ5HY92 759 aa14.02□□□□□ -0.17
HDAC1-208ENST00000482310 DENND1BQ6P3S1 775 aa14.02□□□□□ -0.17
HDAC1-208ENST00000482310 LILRA6Q6PI73 481 aa14.02□□□□□ -0.17
HDAC1-208ENST00000482310 TMC5Q6UXY8 1006 aa14.02□□□□□ -0.17
HDAC1-208ENST00000482310 NOP9Q86U38 636 aaKnown RBP14.02□□□□□ -0.17
HDAC1-208ENST00000482310 EFHBQ8N7U6 833 aa14.02□□□□□ -0.17
HDAC1-208ENST00000482310 CASP10Q92851 521 aa14.02□□□□□ -0.17
HDAC1-208ENST00000482310 KCNK16Q96T55 309 aa14.02□□□□□ -0.17
HDAC1-208ENST00000482310 FAM124BQ9H5Z6 455 aaPredicted RBP14.02□□□□□ -0.17
HDAC1-208ENST00000482310 HESX1Q9UBX0 185 aa14.02□□□□□ -0.17
HDAC1-208ENST00000482310 CDH22Q9UJ99 828 aa14.02□□□□□ -0.17
HDAC1-208ENST00000482310 CAPN11Q9UMQ6 739 aa14.02□□□□□ -0.17
HDAC1-208ENST00000482310 DENND4AQ7Z401 1863 aa14.01□□□□□ -0.17
HDAC1-208ENST00000482310 A0A1W2PQJ5 194 aa14.01□□□□□ -0.17
HDAC1-208ENST00000482310 TULP2O00295 520 aa14.01□□□□□ -0.17
HDAC1-208ENST00000482310 O00370 1275 aa14.01□□□□□ -0.17
HDAC1-208ENST00000482310 MED7O43513 233 aa14.01□□□□□ -0.17
HDAC1-208ENST00000482310 MMEP08473 750 aa14.01□□□□□ -0.17
HDAC1-208ENST00000482310 SRGAP2BP0DMP2 458 aa14.01□□□□□ -0.17
HDAC1-208ENST00000482310 FERP16591 822 aa14.01□□□□□ -0.17
HDAC1-208ENST00000482310 ATF6P18850 670 aa14.01□□□□□ -0.17
HDAC1-208ENST00000482310 POU3F3P20264 500 aaPredicted RBP14.01□□□□□ -0.17
HDAC1-208ENST00000482310 ALDH1A3P47895 512 aa14.01□□□□□ -0.17
HDAC1-208ENST00000482310 MRE11P49959 708 aa14.01□□□□□ -0.17
HDAC1-208ENST00000482310 ZBED6P86452 979 aa14.01□□□□□ -0.17
HDAC1-208ENST00000482310 CCDC149Q6ZUS6 474 aa14.01□□□□□ -0.17
HDAC1-208ENST00000482310 TTC30AQ86WT1 665 aa14.01□□□□□ -0.17
HDAC1-208ENST00000482310 TCEAL8Q8IYN2 117 aa14.01□□□□□ -0.17
HDAC1-208ENST00000482310 EPS8L1Q8TE68 723 aa14.01□□□□□ -0.17
HDAC1-208ENST00000482310 C2orf15Q8WU43 125 aaKnown RBP14.01□□□□□ -0.17
HDAC1-208ENST00000482310 ZNF606Q8WXB4 792 aa14.01□□□□□ -0.17
HDAC1-208ENST00000482310 SECISBP2LQ93073 1101 aaKnown RBP14.01□□□□□ -0.17
HDAC1-208ENST00000482310 HNRNPABQ99729 332 aaKnown RBP14.01□□□□□ -0.17
HDAC1-208ENST00000482310 SMOQ99835 787 aa14.01□□□□□ -0.17
HDAC1-208ENST00000482310 MAGED2Q9UNF1 606 aaPredicted RBP14.01□□□□□ -0.17
HDAC1-208ENST00000482310 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.01□□□□□ -0.17
HDAC1-208ENST00000482310 CCDC195A0A1B0GUA6 201 aa14□□□□□ -0.17
HDAC1-208ENST00000482310 AKR1B15C9JRZ8 316 aaPredicted RBP14□□□□□ -0.17
HDAC1-208ENST00000482310 H3BQ06 376 aaPredicted RBP14□□□□□ -0.17
HDAC1-208ENST00000482310 MFAP3LO75121 409 aa14□□□□□ -0.17
HDAC1-208ENST00000482310 ZMYND10O75800 440 aa14□□□□□ -0.17
HDAC1-208ENST00000482310 NPR3P17342 541 aa14□□□□□ -0.17
HDAC1-208ENST00000482310 RGS7P49802 495 aa14□□□□□ -0.17
HDAC1-208ENST00000482310 BCAT1P54687 386 aa14□□□□□ -0.17
HDAC1-208ENST00000482310 BPIFB4P59827 614 aa14□□□□□ -0.17
HDAC1-208ENST00000482310 KLHL30Q0D2K2 578 aa14□□□□□ -0.17
HDAC1-208ENST00000482310 SMARCB1Q12824 385 aa14□□□□□ -0.17
HDAC1-208ENST00000482310 PLD1Q13393 1074 aa14□□□□□ -0.17
HDAC1-208ENST00000482310 ADAM15Q13444 863 aa14□□□□□ -0.17
HDAC1-208ENST00000482310 MTMR3Q13615 1198 aa14□□□□□ -0.17
HDAC1-208ENST00000482310 TAF12Q16514 161 aa14□□□□□ -0.17
HDAC1-208ENST00000482310 CFAP221Q4G0U5 840 aa14□□□□□ -0.17
HDAC1-208ENST00000482310 ARHGAP17Q68EM7 881 aa14□□□□□ -0.17
HDAC1-208ENST00000482310 ANKRD54Q6NXT1 300 aa14□□□□□ -0.17
HDAC1-208ENST00000482310 ELMSAN1Q6PJG2 1045 aa14□□□□□ -0.17
HDAC1-208ENST00000482310 CLEC20AQ6ZU45 233 aa14□□□□□ -0.17
HDAC1-208ENST00000482310 FUBP3Q96I24 572 aaKnown RBP eCLIP14□□□□□ -0.17
HDAC1-208ENST00000482310 PLEKHA4Q9H4M7 779 aa14□□□□□ -0.17
HDAC1-208ENST00000482310 SFXN1Q9H9B4 322 aa14□□□□□ -0.17
HDAC1-208ENST00000482310 PIDD1Q9HB75 910 aa14□□□□□ -0.17
HDAC1-208ENST00000482310 ABCB6Q9NP58 842 aa14□□□□□ -0.17
HDAC1-208ENST00000482310 DMAP1Q9NPF5 467 aaPredicted RBP14□□□□□ -0.17
HDAC1-208ENST00000482310 HCFC1R1Q9NWW0 138 aa14□□□□□ -0.17
HDAC1-208ENST00000482310 HELZP42694 1942 aaKnown RBP14□□□□□ -0.17
HDAC1-208ENST00000482310 XIRP2A4UGR9 3374 aa13.99□□□□□ -0.17
HDAC1-208ENST00000482310 TRIM66O15016 1216 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms