RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 MRGPREQ86SM8 312 aa6.86□□□□□ -1.31
SF3B1-210ENST00000482158 FANCBQ8NB91 859 aa6.86□□□□□ -1.31
SF3B1-210ENST00000482158 SLC30A5Q8TAD4 765 aa6.86□□□□□ -1.31
SF3B1-210ENST00000482158 ASB10Q8WXI3 467 aa6.86□□□□□ -1.31
SF3B1-210ENST00000482158 ZNF566Q969W8 418 aa6.86□□□□□ -1.31
SF3B1-210ENST00000482158 TMEM41AQ96HV5 264 aa6.86□□□□□ -1.31
SF3B1-210ENST00000482158 SELENOOQ9BVL4 669 aa6.86□□□□□ -1.31
SF3B1-210ENST00000482158 STK33Q9BYT3 514 aa6.86□□□□□ -1.31
SF3B1-210ENST00000482158 INTS13Q9NVM9 706 aa6.86□□□□□ -1.31
SF3B1-210ENST00000482158 ANKFY1Q9P2R3 1169 aa6.86□□□□□ -1.31
SF3B1-210ENST00000482158 TRGV11A0A075B6L2 103 aa6.85□□□□□ -1.31
SF3B1-210ENST00000482158 ADAMTS3O15072 1205 aa6.85□□□□□ -1.31
SF3B1-210ENST00000482158 NDST3O95803 873 aa6.85□□□□□ -1.31
SF3B1-210ENST00000482158 PPP3CBP16298 524 aa6.85□□□□□ -1.31
SF3B1-210ENST00000482158 CD6P30203 668 aa6.85□□□□□ -1.31
SF3B1-210ENST00000482158 PPIFP30405 207 aaKnown RBP6.85□□□□□ -1.31
SF3B1-210ENST00000482158 TRAPPC10P48553 1259 aa6.85□□□□□ -1.31
SF3B1-210ENST00000482158 SP2Q02086 613 aa6.85□□□□□ -1.31
SF3B1-210ENST00000482158 GUCY1B3Q02153 619 aa6.85□□□□□ -1.31
SF3B1-210ENST00000482158 TUBA3CQ13748 450 aa6.85□□□□□ -1.31
SF3B1-210ENST00000482158 RGS7BPQ6MZT1 257 aaPredicted RBP6.85□□□□□ -1.31
SF3B1-210ENST00000482158 TUBA3EQ6PEY2 450 aa6.85□□□□□ -1.31
SF3B1-210ENST00000482158 KIAA0408Q6ZU52 694 aa6.85□□□□□ -1.31
SF3B1-210ENST00000482158 SMC5Q8IY18 1101 aa6.85□□□□□ -1.31
SF3B1-210ENST00000482158 COLGALT2Q8IYK4 626 aa6.85□□□□□ -1.31
SF3B1-210ENST00000482158 GLIS1Q8NBF1 620 aa6.85□□□□□ -1.31
SF3B1-210ENST00000482158 CYP2W1Q8TAV3 490 aa6.85□□□□□ -1.31
SF3B1-210ENST00000482158 IPCEF1Q8WWN9 437 aaPredicted RBP6.85□□□□□ -1.31
SF3B1-210ENST00000482158 LPIN2Q92539 896 aa6.85□□□□□ -1.31
SF3B1-210ENST00000482158 PPP2R3CQ969Q6 453 aa6.85□□□□□ -1.31
SF3B1-210ENST00000482158 MLST8Q9BVC4 326 aa6.85□□□□□ -1.31
SF3B1-210ENST00000482158 NRDE2Q9H7Z3 1164 aa6.85□□□□□ -1.31
SF3B1-210ENST00000482158 ZSCAN32Q9NX65 697 aa6.85□□□□□ -1.31
SF3B1-210ENST00000482158 FAM234BA2RU67 622 aa6.84□□□□□ -1.31
SF3B1-210ENST00000482158 TRIAP1O43715 76 aa6.84□□□□□ -1.31
SF3B1-210ENST00000482158 EGR2P11161 476 aaPredicted RBP6.84□□□□□ -1.31
SF3B1-210ENST00000482158 MYL4P12829 197 aa6.84□□□□□ -1.31
SF3B1-210ENST00000482158 TNFAIP2Q03169 654 aa6.84□□□□□ -1.31
SF3B1-210ENST00000482158 KCNAB1Q14722 419 aa6.84□□□□□ -1.31
SF3B1-210ENST00000482158 SYTL1Q8IYJ3 562 aa6.84□□□□□ -1.31
SF3B1-210ENST00000482158 LNX2Q8N448 690 aa6.84□□□□□ -1.31
SF3B1-210ENST00000482158 SSH3Q8TE77 659 aa6.84□□□□□ -1.31
SF3B1-210ENST00000482158 ZNF384Q8TF68 577 aa6.84□□□□□ -1.31
SF3B1-210ENST00000482158 HAS1Q92839 578 aa6.84□□□□□ -1.31
SF3B1-210ENST00000482158 NELL2Q99435 816 aa6.84□□□□□ -1.31
SF3B1-210ENST00000482158 KRTAP4-11Q9BYQ6 195 aa6.84□□□□□ -1.31
SF3B1-210ENST00000482158 SERTAD3Q9UJW9 196 aa6.84□□□□□ -1.31
SF3B1-210ENST00000482158 LRCH1Q9Y2L9 728 aa6.84□□□□□ -1.31
SF3B1-210ENST00000482158 PLEKHD1A6NEE1 506 aa6.83□□□□□ -1.32
SF3B1-210ENST00000482158 EIF3JO75822 258 aaKnown RBP6.83□□□□□ -1.32
SF3B1-210ENST00000482158 INMTO95050 263 aa6.83□□□□□ -1.32
SF3B1-210ENST00000482158 ERBB2P04626 1255 aa6.83□□□□□ -1.32
SF3B1-210ENST00000482158 SRGNP10124 158 aa6.83□□□□□ -1.32
SF3B1-210ENST00000482158 TPH1P17752 444 aa6.83□□□□□ -1.32
SF3B1-210ENST00000482158 TECP42680 631 aa6.83□□□□□ -1.32
SF3B1-210ENST00000482158 COPAP53621 1224 aa6.83□□□□□ -1.32
SF3B1-210ENST00000482158 ITGA8P53708 1063 aa6.83□□□□□ -1.32
SF3B1-210ENST00000482158 E2F2Q14209 437 aa6.83□□□□□ -1.32
SF3B1-210ENST00000482158 SF3B3Q15393 1217 aaKnown RBP6.83□□□□□ -1.32
SF3B1-210ENST00000482158 GRAMD1BQ3KR37 738 aa6.83□□□□□ -1.32
SF3B1-210ENST00000482158 ICE2Q659A1 982 aa6.83□□□□□ -1.32
SF3B1-210ENST00000482158 IGFL4Q6B9Z1 124 aa6.83□□□□□ -1.32
SF3B1-210ENST00000482158 SFRP4Q6FHJ7 346 aaPredicted RBP6.83□□□□□ -1.32
SF3B1-210ENST00000482158 USP49Q70CQ1 688 aa6.83□□□□□ -1.32
SF3B1-210ENST00000482158 EXOC8Q8IYI6 725 aa6.83□□□□□ -1.32
SF3B1-210ENST00000482158 FAM136AQ96C01 138 aa6.83□□□□□ -1.32
SF3B1-210ENST00000482158 MAGEB5Q9BZ81 275 aa6.83□□□□□ -1.32
SF3B1-210ENST00000482158 TRIM5Q9C035 493 aa6.83□□□□□ -1.32
SF3B1-210ENST00000482158 GBA2Q9HCG7 927 aaPredicted RBP6.83□□□□□ -1.32
SF3B1-210ENST00000482158 LOC102724159A0A0B4J2E5 919 aa6.82□□□□□ -1.32
SF3B1-210ENST00000482158 PIPSLA2A3N6 862 aa6.82□□□□□ -1.32
SF3B1-210ENST00000482158 TCEA3O75764 348 aa6.82□□□□□ -1.32
SF3B1-210ENST00000482158 PDHA1P08559 390 aa6.82□□□□□ -1.32
SF3B1-210ENST00000482158 ADORA2AP29274 412 aa6.82□□□□□ -1.32
SF3B1-210ENST00000482158 PTGS2P35354 604 aa6.82□□□□□ -1.32
SF3B1-210ENST00000482158 PWP2Q15269 919 aaKnown RBP6.82□□□□□ -1.32
SF3B1-210ENST00000482158 CACHD1Q5VU97 1274 aa6.82□□□□□ -1.32
SF3B1-210ENST00000482158 CRTC1Q6UUV9 634 aa6.82□□□□□ -1.32
SF3B1-210ENST00000482158 TSHZ1Q6ZSZ6 1077 aa6.82□□□□□ -1.32
SF3B1-210ENST00000482158 MYLK4Q86YV6 388 aaPredicted RBP6.82□□□□□ -1.32
SF3B1-210ENST00000482158 DNAJB14Q8TBM8 379 aa6.82□□□□□ -1.32
SF3B1-210ENST00000482158 TMEM171Q8WVE6 324 aa6.82□□□□□ -1.32
SF3B1-210ENST00000482158 ATG4AQ8WYN0 398 aa6.82□□□□□ -1.32
SF3B1-210ENST00000482158 PTCD3Q96EY7 689 aaKnown RBP6.82□□□□□ -1.32
SF3B1-210ENST00000482158 EIF2AQ9BY44 585 aaKnown RBP6.82□□□□□ -1.32
SF3B1-210ENST00000482158 ACTRT3Q9BYD9 372 aa6.82□□□□□ -1.32
SF3B1-210ENST00000482158 HEYLQ9NQ87 328 aaPredicted RBP6.82□□□□□ -1.32
SF3B1-210ENST00000482158 RGL1Q9NZL6 768 aa6.82□□□□□ -1.32
SF3B1-210ENST00000482158 SLC39A10Q9ULF5 831 aa6.82□□□□□ -1.32
SF3B1-210ENST00000482158 CEP83Q9Y592 693 aa6.82□□□□□ -1.32
SF3B1-210ENST00000482158 ADM5C9JUS6 153 aa6.81□□□□□ -1.32
SF3B1-210ENST00000482158 HNRNPDLO14979 420 aaKnown RBP6.81□□□□□ -1.32
SF3B1-210ENST00000482158 PPM1DO15297 605 aa6.81□□□□□ -1.32
SF3B1-210ENST00000482158 CD3EAPO15446 510 aaKnown RBP6.81□□□□□ -1.32
SF3B1-210ENST00000482158 PROM1O43490 865 aa6.81□□□□□ -1.32
SF3B1-210ENST00000482158 PIAS2O75928 621 aa6.81□□□□□ -1.32
SF3B1-210ENST00000482158 RASAL1O95294 804 aa6.81□□□□□ -1.32
SF3B1-210ENST00000482158 PDIA3P30101 505 aaKnown RBP6.81□□□□□ -1.32
SF3B1-210ENST00000482158 ALDH9A1P49189 494 aa6.81□□□□□ -1.32
SF3B1-210ENST00000482158 SATB1Q01826 763 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms