RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 ZBTB6Q15916 424 aa15.22■□□□□ 0.03
CHD3-211ENST00000481999 DCAF4L1Q3SXM0 396 aa15.22■□□□□ 0.03
CHD3-211ENST00000481999 TWF2Q6IBS0 349 aaKnown RBP15.22■□□□□ 0.03
CHD3-211ENST00000481999 SMG8Q8ND04 991 aaKnown RBP15.22■□□□□ 0.03
CHD3-211ENST00000481999 RAPGEF5Q92565 580 aa15.22■□□□□ 0.03
CHD3-211ENST00000481999 PGM2Q96G03 612 aa15.22■□□□□ 0.03
CHD3-211ENST00000481999 IPPQ9Y573 584 aa15.22■□□□□ 0.03
CHD3-211ENST00000481999 SCINQ9Y6U3 715 aa15.22■□□□□ 0.03
CHD3-211ENST00000481999 FSBPO95073 299 aa15.22■□□□□ 0.03
CHD3-211ENST00000481999 CALB1P05937 261 aa15.22■□□□□ 0.03
CHD3-211ENST00000481999 CACNB2Q08289 660 aaPredicted RBP15.22■□□□□ 0.03
CHD3-211ENST00000481999 TRNP1Q6NT89 227 aa15.22■□□□□ 0.03
CHD3-211ENST00000481999 ALKAL1Q6UXT8 129 aa15.22■□□□□ 0.03
CHD3-211ENST00000481999 XYLT1Q86Y38 959 aa15.22■□□□□ 0.03
CHD3-211ENST00000481999 LPPQ93052 612 aa15.22■□□□□ 0.03
CHD3-211ENST00000481999 FAM129AQ9BZQ8 928 aa15.22■□□□□ 0.03
CHD3-211ENST00000481999 ZWILCHQ9H900 591 aa15.22■□□□□ 0.03
CHD3-211ENST00000481999 BARX2Q9UMQ3 279 aaPredicted RBP15.22■□□□□ 0.03
CHD3-211ENST00000481999 CEP83Q9Y592 693 aa15.22■□□□□ 0.03
CHD3-211ENST00000481999 E5RJQ4 531 aa15.21■□□□□ 0.03
CHD3-211ENST00000481999 PFKMP08237 780 aa15.21■□□□□ 0.03
CHD3-211ENST00000481999 FGFR1P11362 822 aa15.21■□□□□ 0.03
CHD3-211ENST00000481999 KRT3P12035 628 aa15.21■□□□□ 0.03
CHD3-211ENST00000481999 SLC1A1P43005 524 aa15.21■□□□□ 0.03
CHD3-211ENST00000481999 FNTAP49354 379 aa15.21■□□□□ 0.03
CHD3-211ENST00000481999 YARSP54577 528 aaKnown RBP15.21■□□□□ 0.03
CHD3-211ENST00000481999 SREBF2Q12772 1141 aa15.21■□□□□ 0.03
CHD3-211ENST00000481999 SOWAHAQ2M3V2 549 aa15.21■□□□□ 0.03
CHD3-211ENST00000481999 MFSD7Q6UXD7 560 aa15.21■□□□□ 0.03
CHD3-211ENST00000481999 RHOT1Q8IXI2 618 aa15.21■□□□□ 0.03
CHD3-211ENST00000481999 PLVAPQ9BX97 442 aa15.21■□□□□ 0.03
CHD3-211ENST00000481999 B3GNT5Q9BYG0 378 aa15.21■□□□□ 0.03
CHD3-211ENST00000481999 C10orf88Q9H8K7 445 aa15.21■□□□□ 0.03
CHD3-211ENST00000481999 VRTNQ9H8Y1 702 aa15.21■□□□□ 0.03
CHD3-211ENST00000481999 PCSK1NQ9UHG2 260 aa15.21■□□□□ 0.03
CHD3-211ENST00000481999 FSCN2O14926 492 aa15.21■□□□□ 0.03
CHD3-211ENST00000481999 CAND2O75155 1236 aa15.21■□□□□ 0.03
CHD3-211ENST00000481999 DUSP11O75319 330 aaKnown RBP15.21■□□□□ 0.03
CHD3-211ENST00000481999 CD48P09326 243 aa15.21■□□□□ 0.03
CHD3-211ENST00000481999 ATICP31939 592 aa15.21■□□□□ 0.03
CHD3-211ENST00000481999 INHBEP58166 350 aa15.21■□□□□ 0.03
CHD3-211ENST00000481999 NOGQ13253 232 aa15.21■□□□□ 0.03
CHD3-211ENST00000481999 SLMAPQ14BN4 828 aa15.21■□□□□ 0.03
CHD3-211ENST00000481999 C9orf57Q5W0N0 161 aa15.21■□□□□ 0.03
CHD3-211ENST00000481999 TTC30AQ86WT1 665 aa15.21■□□□□ 0.03
CHD3-211ENST00000481999 CENPTQ96BT3 561 aa15.21■□□□□ 0.03
CHD3-211ENST00000481999 PWWP2AQ96N64 755 aa15.21■□□□□ 0.03
CHD3-211ENST00000481999 DNAJC17Q9NVM6 304 aaKnown RBP15.21■□□□□ 0.03
CHD3-211ENST00000481999 RNF186Q9NXI6 227 aa15.21■□□□□ 0.03
CHD3-211ENST00000481999 CDY2AQ9Y6F7 541 aa15.21■□□□□ 0.03
CHD3-211ENST00000481999 SHBGP04278 402 aa15.2■□□□□ 0.02
CHD3-211ENST00000481999 PSMA2P25787 234 aa15.2■□□□□ 0.02
CHD3-211ENST00000481999 TM4SF4P48230 202 aa15.2■□□□□ 0.02
CHD3-211ENST00000481999 YWHAEP62258 255 aaKnown RBP15.2■□□□□ 0.02
CHD3-211ENST00000481999 INCA1Q0VD86 236 aa15.2■□□□□ 0.02
CHD3-211ENST00000481999 IFT88Q13099 833 aa15.2■□□□□ 0.02
CHD3-211ENST00000481999 KLF1Q13351 362 aaPredicted RBP15.2■□□□□ 0.02
CHD3-211ENST00000481999 PMF1Q6P1K2 205 aa15.2■□□□□ 0.02
CHD3-211ENST00000481999 C6orf89Q6UWU4 347 aa15.2■□□□□ 0.02
CHD3-211ENST00000481999 C12orf50Q8NA57 414 aaPredicted RBP15.2■□□□□ 0.02
CHD3-211ENST00000481999 GLIS1Q8NBF1 620 aa15.2■□□□□ 0.02
CHD3-211ENST00000481999 OR6B3Q8NGW1 331 aa15.2■□□□□ 0.02
CHD3-211ENST00000481999 UHMK1Q8TAS1 419 aaKnown RBP15.2■□□□□ 0.02
CHD3-211ENST00000481999 OSBPL8Q9BZF1 889 aa15.2■□□□□ 0.02
CHD3-211ENST00000481999 CNTN3Q9P232 1028 aa15.2■□□□□ 0.02
CHD3-211ENST00000481999 IP6K2Q9UHH9 426 aa15.2■□□□□ 0.02
CHD3-211ENST00000481999 SCN10AQ9Y5Y9 1956 aa15.2■□□□□ 0.02
CHD3-211ENST00000481999 C5orf60A6NFR6 353 aa15.2■□□□□ 0.02
CHD3-211ENST00000481999 TP73O15350 636 aa15.2■□□□□ 0.02
CHD3-211ENST00000481999 LRCH4O75427 683 aa15.2■□□□□ 0.02
CHD3-211ENST00000481999 GABBR2O75899 941 aa15.2■□□□□ 0.02
CHD3-211ENST00000481999 KRT1P04264 644 aa15.2■□□□□ 0.02
CHD3-211ENST00000481999 CCDC130P13994 396 aa15.2■□□□□ 0.02
CHD3-211ENST00000481999 RABGGTBP53611 331 aa15.2■□□□□ 0.02
CHD3-211ENST00000481999 MYO1EQ12965 1108 aa15.2■□□□□ 0.02
CHD3-211ENST00000481999 SLC29A2Q14542 456 aa15.2■□□□□ 0.02
CHD3-211ENST00000481999 CDO1Q16878 200 aa15.2■□□□□ 0.02
CHD3-211ENST00000481999 GOLGA7BQ2TAP0 167 aa15.2■□□□□ 0.02
CHD3-211ENST00000481999 RNF187Q5TA31 235 aaPredicted RBP15.2■□□□□ 0.02
CHD3-211ENST00000481999 DNAJC5GQ8N7S2 189 aa15.2■□□□□ 0.02
CHD3-211ENST00000481999 CCDC114Q96M63 670 aa15.2■□□□□ 0.02
CHD3-211ENST00000481999 NT5C1AQ9BXI3 368 aa15.2■□□□□ 0.02
CHD3-211ENST00000481999 DDX20Q9UHI6 824 aaKnown RBP15.2■□□□□ 0.02
CHD3-211ENST00000481999 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.2■□□□□ 0.02
CHD3-211ENST00000481999 CHRNA1P02708 482 aa15.19■□□□□ 0.02
CHD3-211ENST00000481999 ASGR1P07306 291 aa15.19■□□□□ 0.02
CHD3-211ENST00000481999 HOXC8P31273 242 aa15.19■□□□□ 0.02
CHD3-211ENST00000481999 FCGRTP55899 365 aa15.19■□□□□ 0.02
CHD3-211ENST00000481999 DYNLT1P63172 113 aa15.19■□□□□ 0.02
CHD3-211ENST00000481999 KRT17Q04695 432 aa15.19■□□□□ 0.02
CHD3-211ENST00000481999 C15orf59Q2T9L4 293 aaPredicted RBP15.19■□□□□ 0.02
CHD3-211ENST00000481999 C6orf118Q5T5N4 469 aa15.19■□□□□ 0.02
CHD3-211ENST00000481999 FAM102AQ5T9C2 384 aaPredicted RBP15.19■□□□□ 0.02
CHD3-211ENST00000481999 CLEC4CQ8WTT0 213 aa15.19■□□□□ 0.02
CHD3-211ENST00000481999 TMEM109Q9BVC6 243 aa15.19■□□□□ 0.02
CHD3-211ENST00000481999 ZNF518BQ9C0D4 1074 aa15.19■□□□□ 0.02
CHD3-211ENST00000481999 LHX5Q9H2C1 402 aa15.19■□□□□ 0.02
CHD3-211ENST00000481999 AGO3Q9H9G7 860 aaKnown RBP15.19■□□□□ 0.02
CHD3-211ENST00000481999 GTF2IRD1Q9UHL9 959 aa15.19■□□□□ 0.02
CHD3-211ENST00000481999 CAPN7Q9Y6W3 813 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms