RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 PQBP1O60828 265 aaKnown RBP16.61■□□□□ 0.25
RXRA-202ENST00000481739 RECQL4O94761 1208 aa16.61■□□□□ 0.25
RXRA-202ENST00000481739 TJP3O95049 919 aa16.61■□□□□ 0.25
RXRA-202ENST00000481739 RALAP11233 206 aa16.61■□□□□ 0.25
RXRA-202ENST00000481739 IBSPP21815 317 aaPredicted RBP16.61■□□□□ 0.25
RXRA-202ENST00000481739 GPD2P43304 727 aa16.61■□□□□ 0.25
RXRA-202ENST00000481739 SSR1P43307 286 aaKnown RBP16.61■□□□□ 0.25
RXRA-202ENST00000481739 CAV1Q03135 178 aa16.61■□□□□ 0.25
RXRA-202ENST00000481739 CALCOCO2Q13137 446 aa16.61■□□□□ 0.25
RXRA-202ENST00000481739 PDCLQ13371 301 aa16.61■□□□□ 0.25
RXRA-202ENST00000481739 PPP1R7Q15435 360 aa16.61■□□□□ 0.25
RXRA-202ENST00000481739 DRICH1Q6PGQ1 229 aaPredicted RBP16.61■□□□□ 0.25
RXRA-202ENST00000481739 ZNF771Q7L3S4 317 aaPredicted RBP16.61■□□□□ 0.25
RXRA-202ENST00000481739 CCHCR1Q8TD31 782 aa16.61■□□□□ 0.25
RXRA-202ENST00000481739 PIK3R5Q8WYR1 880 aa16.61■□□□□ 0.25
RXRA-202ENST00000481739 MCRS1Q96EZ8 462 aa16.61■□□□□ 0.25
RXRA-202ENST00000481739 TRIM31Q9BZY9 425 aa16.61■□□□□ 0.25
RXRA-202ENST00000481739 DCLK3Q9C098 648 aa16.61■□□□□ 0.25
RXRA-202ENST00000481739 USTQ9Y2C2 406 aa16.61■□□□□ 0.25
RXRA-202ENST00000481739 IPPQ9Y573 584 aa16.61■□□□□ 0.25
RXRA-202ENST00000481739 TRIP11Q15643 1979 aa16.61■□□□□ 0.25
RXRA-202ENST00000481739 DHX9Q08211 1270 aaKnown RBP16.6■□□□□ 0.25
RXRA-202ENST00000481739 ZNF252P-AS1Q0IIN9 211 aa16.6■□□□□ 0.25
RXRA-202ENST00000481739 PTK6Q13882 451 aa16.6■□□□□ 0.25
RXRA-202ENST00000481739 SLMAPQ14BN4 828 aa16.6■□□□□ 0.25
RXRA-202ENST00000481739 CROCCP2Q86T23 111 aa16.6■□□□□ 0.25
RXRA-202ENST00000481739 XYLT1Q86Y38 959 aa16.6■□□□□ 0.25
RXRA-202ENST00000481739 FAM126BQ8IXS8 530 aa16.6■□□□□ 0.25
RXRA-202ENST00000481739 BBOF1Q8ND07 529 aa16.6■□□□□ 0.25
RXRA-202ENST00000481739 RIN2Q8WYP3 895 aaPredicted RBP16.6■□□□□ 0.25
RXRA-202ENST00000481739 CPXM1Q96SM3 734 aa16.6■□□□□ 0.25
RXRA-202ENST00000481739 FRMD8P1Q9BZ68 369 aaPredicted RBP16.6■□□□□ 0.25
RXRA-202ENST00000481739 TXLNGYQ9BZA5 131 aa16.6■□□□□ 0.25
RXRA-202ENST00000481739 CRISPLD2Q9H0B8 497 aa16.6■□□□□ 0.25
RXRA-202ENST00000481739 GRHL1Q9NZI5 618 aa16.6■□□□□ 0.25
RXRA-202ENST00000481739 KLK14Q9P0G3 267 aa16.6■□□□□ 0.25
RXRA-202ENST00000481739 HMGXB4Q9UGU5 601 aa16.6■□□□□ 0.25
RXRA-202ENST00000481739 PLAAQ9Y263 795 aa16.6■□□□□ 0.25
RXRA-202ENST00000481739 HMGB1P1B2RPK0 211 aaPredicted RBP16.59■□□□□ 0.25
RXRA-202ENST00000481739 NDC80O14777 642 aa16.59■□□□□ 0.25
RXRA-202ENST00000481739 KRT1P04264 644 aa16.59■□□□□ 0.25
RXRA-202ENST00000481739 PSMA2P25787 234 aa16.59■□□□□ 0.25
RXRA-202ENST00000481739 RPL21P46778 160 aaKnown RBP16.59■□□□□ 0.25
RXRA-202ENST00000481739 CYP4A22Q5TCH4 519 aa16.59■□□□□ 0.25
RXRA-202ENST00000481739 C9orf57Q5W0N0 161 aa16.59■□□□□ 0.25
RXRA-202ENST00000481739 ZDHHC24Q6UX98 284 aa16.59■□□□□ 0.25
RXRA-202ENST00000481739 ARMC5Q96C12 935 aa16.59■□□□□ 0.25
RXRA-202ENST00000481739 ZMAT2Q96NC0 199 aaKnown RBP16.59■□□□□ 0.25
RXRA-202ENST00000481739 SLITRK1Q96PX8 696 aa16.59■□□□□ 0.25
RXRA-202ENST00000481739 NCAPGQ9BPX3 1015 aa16.59■□□□□ 0.25
RXRA-202ENST00000481739 RNF39Q9H2S5 420 aa16.59■□□□□ 0.25
RXRA-202ENST00000481739 SNX24Q9Y343 169 aa16.59■□□□□ 0.25
RXRA-202ENST00000481739 FAM163BP0C2L3 166 aa16.59■□□□□ 0.25
RXRA-202ENST00000481739 ITIH2P19823 946 aa16.59■□□□□ 0.25
RXRA-202ENST00000481739 PLTPP55058 493 aa16.59■□□□□ 0.25
RXRA-202ENST00000481739 BFSP2Q13515 415 aa16.59■□□□□ 0.25
RXRA-202ENST00000481739 TFDP3Q5H9I0 405 aa16.59■□□□□ 0.25
RXRA-202ENST00000481739 CCDC89Q8N998 374 aa16.59■□□□□ 0.25
RXRA-202ENST00000481739 SMG8Q8ND04 991 aaKnown RBP16.59■□□□□ 0.25
RXRA-202ENST00000481739 FBXO25Q8TCJ0 367 aa16.59■□□□□ 0.25
RXRA-202ENST00000481739 STK32AQ8WU08 396 aa16.59■□□□□ 0.25
RXRA-202ENST00000481739 C1orf54Q8WWF1 131 aa16.59■□□□□ 0.25
RXRA-202ENST00000481739 ART4Q93070 314 aa16.59■□□□□ 0.25
RXRA-202ENST00000481739 CXCL16Q9H2A7 254 aa16.59■□□□□ 0.25
RXRA-202ENST00000481739 RNF19AQ9NV58 838 aa16.59■□□□□ 0.25
RXRA-202ENST00000481739 GDAP2Q9NXN4 497 aa16.59■□□□□ 0.25
RXRA-202ENST00000481739 CYTH4Q9UIA0 394 aa16.59■□□□□ 0.25
RXRA-202ENST00000481739 SNX9Q9Y5X1 595 aa16.59■□□□□ 0.25
RXRA-202ENST00000481739 F8VP50 259 aa16.58■□□□□ 0.24
RXRA-202ENST00000481739 ERBB2P04626 1255 aa16.58■□□□□ 0.24
RXRA-202ENST00000481739 NUDT17P0C025 328 aa16.58■□□□□ 0.24
RXRA-202ENST00000481739 MYZAPP0CAP1 466 aa16.58■□□□□ 0.24
RXRA-202ENST00000481739 DESP17661 470 aa16.58■□□□□ 0.24
RXRA-202ENST00000481739 RFC1P35251 1148 aaPredicted RBP16.58■□□□□ 0.24
RXRA-202ENST00000481739 OGDHQ02218 1023 aa16.58■□□□□ 0.24
RXRA-202ENST00000481739 KRT17Q04695 432 aa16.58■□□□□ 0.24
RXRA-202ENST00000481739 UAP1Q16222 522 aaPredicted RBP16.58■□□□□ 0.24
RXRA-202ENST00000481739 GLRA4Q5JXX5 417 aa16.58■□□□□ 0.24
RXRA-202ENST00000481739 ARHGAP17Q68EM7 881 aa16.58■□□□□ 0.24
RXRA-202ENST00000481739 SLC39A5Q6ZMH5 540 aa16.58■□□□□ 0.24
RXRA-202ENST00000481739 CEP128Q6ZU80 1094 aa16.58■□□□□ 0.24
RXRA-202ENST00000481739 ZDHHC17Q8IUH5 632 aa16.58■□□□□ 0.24
RXRA-202ENST00000481739 HACE1Q8IYU2 909 aa16.58■□□□□ 0.24
RXRA-202ENST00000481739 TMEM130Q8N3G9 435 aa16.58■□□□□ 0.24
RXRA-202ENST00000481739 UBLCP1Q8WVY7 318 aaPredicted RBP16.58■□□□□ 0.24
RXRA-202ENST00000481739 PABPC3Q9H361 631 aaKnown RBP16.58■□□□□ 0.24
RXRA-202ENST00000481739 FAM105AQ9NUU6 356 aa16.58■□□□□ 0.24
RXRA-202ENST00000481739 TSPAN16Q9UKR8 245 aa16.58■□□□□ 0.24
RXRA-202ENST00000481739 SQORQ9Y6N5 450 aa16.58■□□□□ 0.24
RXRA-202ENST00000481739 SMIM28A0A1B0GU29 152 aa16.57■□□□□ 0.24
RXRA-202ENST00000481739 H0YGN5 161 aa16.57■□□□□ 0.24
RXRA-202ENST00000481739 GOLGA8SH3BPF8 625 aa16.57■□□□□ 0.24
RXRA-202ENST00000481739 PIRO00625 290 aa16.57■□□□□ 0.24
RXRA-202ENST00000481739 RNF8O76064 485 aa16.57■□□□□ 0.24
RXRA-202ENST00000481739 GJB6O95452 261 aa16.57■□□□□ 0.24
RXRA-202ENST00000481739 KRT14P02533 472 aa16.57■□□□□ 0.24
RXRA-202ENST00000481739 SELPP16109 830 aa16.57■□□□□ 0.24
RXRA-202ENST00000481739 PCK1P35558 622 aa16.57■□□□□ 0.24
RXRA-202ENST00000481739 LMAN1P49257 510 aa16.57■□□□□ 0.24
RXRA-202ENST00000481739 ZFYVE27Q5T4F4 411 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms