RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 BECN2A8MW95 431 aa21.62■■□□□ 1.05
CTSA-206ENST00000480961 F8VP50 259 aa21.62■■□□□ 1.05
CTSA-206ENST00000480961 KCNMA1Q12791 1236 aa21.62■■□□□ 1.05
CTSA-206ENST00000480961 POTEHQ6S545 545 aa21.62■■□□□ 1.05
CTSA-206ENST00000480961 TMEM270Q6UE05 265 aa21.62■■□□□ 1.05
CTSA-206ENST00000480961 VSTM1Q6UX27 236 aa21.62■■□□□ 1.05
CTSA-206ENST00000480961 OTOP3Q7RTS5 596 aa21.62■■□□□ 1.05
CTSA-206ENST00000480961 ITIH5Q86UX2 942 aa21.62■■□□□ 1.05
CTSA-206ENST00000480961 LUZP1Q86V48 1076 aa21.62■■□□□ 1.05
CTSA-206ENST00000480961 TTC39CQ8N584 583 aa21.62■■□□□ 1.05
CTSA-206ENST00000480961 CYFIP2Q96F07 1278 aa21.62■■□□□ 1.05
CTSA-206ENST00000480961 KCNK16Q96T55 309 aa21.62■■□□□ 1.05
CTSA-206ENST00000480961 SIX2Q9NPC8 291 aa21.62■■□□□ 1.05
CTSA-206ENST00000480961 GTPBP10A4D1E9 387 aaKnown RBP21.61■■□□□ 1.05
CTSA-206ENST00000480961 RNF225M0QZC1 329 aaPredicted RBP21.61■■□□□ 1.05
CTSA-206ENST00000480961 MOSPD3O75425 235 aa21.61■■□□□ 1.05
CTSA-206ENST00000480961 AP1G2O75843 785 aa21.61■■□□□ 1.05
CTSA-206ENST00000480961 HMGA1P17096 107 aaKnown RBP21.61■■□□□ 1.05
CTSA-206ENST00000480961 YWHAEP62258 255 aaKnown RBP21.61■■□□□ 1.05
CTSA-206ENST00000480961 GCNT1Q02742 428 aa21.61■■□□□ 1.05
CTSA-206ENST00000480961 ARHGAP44Q17R89 818 aa21.61■■□□□ 1.05
CTSA-206ENST00000480961 PRSS36Q5K4E3 855 aa21.61■■□□□ 1.05
CTSA-206ENST00000480961 ANKRD20A12PQ8NF67 263 aa21.61■■□□□ 1.05
CTSA-206ENST00000480961 FGF13Q92913 245 aa21.61■■□□□ 1.05
CTSA-206ENST00000480961 ACSF2Q96CM8 615 aaPredicted RBP21.61■■□□□ 1.05
CTSA-206ENST00000480961 MCRS1Q96EZ8 462 aa21.61■■□□□ 1.05
CTSA-206ENST00000480961 LSM14BQ9BX40 385 aaKnown RBP21.61■■□□□ 1.05
CTSA-206ENST00000480961 KRT82Q9NSB4 513 aa21.61■■□□□ 1.05
CTSA-206ENST00000480961 LIMD1Q9UGP4 676 aa21.61■■□□□ 1.05
CTSA-206ENST00000480961 AJAP1Q9UKB5 411 aaPredicted RBP21.61■■□□□ 1.05
CTSA-206ENST00000480961 BDP1A6H8Y1 2624 aa21.61■■□□□ 1.05
CTSA-206ENST00000480961 MTCL1Q9Y4B5 1905 aaKnown RBP21.61■■□□□ 1.05
CTSA-206ENST00000480961 A0A1W2PRU2 124 aa21.6■■□□□ 1.05
CTSA-206ENST00000480961 BEST1O76090 585 aa21.6■■□□□ 1.05
CTSA-206ENST00000480961 TPM2P07951 284 aa21.6■■□□□ 1.05
CTSA-206ENST00000480961 KRT5P13647 590 aa21.6■■□□□ 1.05
CTSA-206ENST00000480961 CD19P15391 556 aa21.6■■□□□ 1.05
CTSA-206ENST00000480961 ANXA13P27216 316 aa21.6■■□□□ 1.05
CTSA-206ENST00000480961 GABRR2P28476 465 aa21.6■■□□□ 1.05
CTSA-206ENST00000480961 KLK7P49862 253 aa21.6■■□□□ 1.05
CTSA-206ENST00000480961 TEAD2Q15562 447 aa21.6■■□□□ 1.05
CTSA-206ENST00000480961 PPP1R26Q5T8A7 1209 aaPredicted RBP21.6■■□□□ 1.05
CTSA-206ENST00000480961 SHKBP1Q8TBC3 707 aa21.6■■□□□ 1.05
CTSA-206ENST00000480961 JAKMIP2Q96AA8 810 aa21.6■■□□□ 1.05
CTSA-206ENST00000480961 HNRNPABQ99729 332 aaKnown RBP21.6■■□□□ 1.05
CTSA-206ENST00000480961 SMOQ99835 787 aa21.6■■□□□ 1.05
CTSA-206ENST00000480961 APEX2Q9UBZ4 518 aa21.6■■□□□ 1.05
CTSA-206ENST00000480961 CDH7Q9ULB5 785 aa21.6■■□□□ 1.05
CTSA-206ENST00000480961 USTQ9Y2C2 406 aa21.6■■□□□ 1.05
CTSA-206ENST00000480961 ATP8B3O60423 1300 aa21.59■■□□□ 1.05
CTSA-206ENST00000480961 ZNF197O14709 1029 aa21.59■■□□□ 1.05
CTSA-206ENST00000480961 TRIM66O15016 1216 aa21.59■■□□□ 1.05
CTSA-206ENST00000480961 TRIM21P19474 475 aaKnown RBP21.59■■□□□ 1.05
CTSA-206ENST00000480961 EPHA5P54756 1037 aa21.59■■□□□ 1.05
CTSA-206ENST00000480961 MAP3K7CLP57077 242 aa21.59■■□□□ 1.05
CTSA-206ENST00000480961 USP46P62068 366 aa21.59■■□□□ 1.05
CTSA-206ENST00000480961 DPY19L2P1Q6NXN4 242 aa21.59■■□□□ 1.05
CTSA-206ENST00000480961 GAREM2Q75VX8 874 aa21.59■■□□□ 1.05
CTSA-206ENST00000480961 APTXQ7Z2E3 356 aaKnown RBP21.59■■□□□ 1.05
CTSA-206ENST00000480961 NPAS3Q8IXF0 933 aa21.59■■□□□ 1.05
CTSA-206ENST00000480961 RBBP8NLQ8NC74 664 aaPredicted RBP21.59■■□□□ 1.05
CTSA-206ENST00000480961 SMARCD1Q96GM5 515 aa21.59■■□□□ 1.05
CTSA-206ENST00000480961 C8orf48Q96LL4 319 aa21.59■■□□□ 1.05
CTSA-206ENST00000480961 ZSWIM3Q96MP5 696 aa21.59■■□□□ 1.05
CTSA-206ENST00000480961 DNAI2Q9GZS0 605 aa21.59■■□□□ 1.05
CTSA-206ENST00000480961 ATXN3LQ9H3M9 355 aa21.59■■□□□ 1.05
CTSA-206ENST00000480961 IL21Q9HBE4 155 aa21.59■■□□□ 1.05
CTSA-206ENST00000480961 AVENQ9NQS1 362 aaPredicted RBP21.59■■□□□ 1.05
CTSA-206ENST00000480961 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.59■■□□□ 1.05
CTSA-206ENST00000480961 NOL4O94818 638 aa21.58■■□□□ 1.05
CTSA-206ENST00000480961 ASGR2P07307 311 aa21.58■■□□□ 1.05
CTSA-206ENST00000480961 FAM200BP0CF97 657 aa21.58■■□□□ 1.05
CTSA-206ENST00000480961 CSH1P0DML2 217 aa21.58■■□□□ 1.05
CTSA-206ENST00000480961 CSH2P0DML3 217 aa21.58■■□□□ 1.05
CTSA-206ENST00000480961 LAMP2P13473 410 aa21.58■■□□□ 1.05
CTSA-206ENST00000480961 USP8P40818 1118 aa21.58■■□□□ 1.05
CTSA-206ENST00000480961 MFAP3P55082 362 aa21.58■■□□□ 1.05
CTSA-206ENST00000480961 CYP4F8P98187 520 aa21.58■■□□□ 1.05
CTSA-206ENST00000480961 IFRD2Q12894 506 aaPredicted RBP21.58■■□□□ 1.05
CTSA-206ENST00000480961 PTPN21Q16825 1174 aa21.58■■□□□ 1.05
CTSA-206ENST00000480961 FKBP15Q5T1M5 1219 aa21.58■■□□□ 1.05
CTSA-206ENST00000480961 STXBP5Q5T5C0 1151 aa21.58■■□□□ 1.05
CTSA-206ENST00000480961 RNF135Q8IUD6 432 aa21.58■■□□□ 1.05
CTSA-206ENST00000480961 GPIHBP1Q8IV16 184 aa21.58■■□□□ 1.05
CTSA-206ENST00000480961 ZMIZ2Q8NF64 920 aa21.58■■□□□ 1.05
CTSA-206ENST00000480961 TFAP2BQ92481 460 aa21.58■■□□□ 1.05
CTSA-206ENST00000480961 SPATA17Q96L03 361 aa21.58■■□□□ 1.05
CTSA-206ENST00000480961 DNAJC12Q9UKB3 198 aa21.58■■□□□ 1.05
CTSA-206ENST00000480961 C2orf16Q68DN1 1984 aa21.57■■□□□ 1.04
CTSA-206ENST00000480961 MUC3AQ02505 3323 aa21.57■■□□□ 1.04
CTSA-206ENST00000480961 LRRC10BA6NIK2 292 aa21.57■■□□□ 1.04
CTSA-206ENST00000480961 LGALS16A8MUM7 142 aa21.57■■□□□ 1.04
CTSA-206ENST00000480961 GOLGA7BQ2TAP0 167 aa21.57■■□□□ 1.04
CTSA-206ENST00000480961 ZDHHC14Q8IZN3 488 aa21.57■■□□□ 1.04
CTSA-206ENST00000480961 LEMD2Q8NC56 503 aa21.57■■□□□ 1.04
CTSA-206ENST00000480961 RSAD2Q8WXG1 361 aa21.57■■□□□ 1.04
CTSA-206ENST00000480961 KHSRPQ92945 711 aaKnown RBP eCLIP21.57■■□□□ 1.04
CTSA-206ENST00000480961 FAM124BQ9H5Z6 455 aaPredicted RBP21.57■■□□□ 1.04
CTSA-206ENST00000480961 DMAP1Q9NPF5 467 aaPredicted RBP21.57■■□□□ 1.04
CTSA-206ENST00000480961 PNMA6AP0CW24 399 aaPredicted RBP21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms