RNA–Protein interactions for RNA: ENST00000480348.6

CNKSR1-204, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 5

Gene CNKSR1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-204ENST00000480348 SMG5Q9UPR3 1016 aaKnown RBP11.53□□□□□ -0.56
CNKSR1-204ENST00000480348 FRMD4BQ9Y2L6 1034 aa11.53□□□□□ -0.56
CNKSR1-204ENST00000480348 MYH10P35580 1976 aa11.53□□□□□ -0.56
CNKSR1-204ENST00000480348 SPAG17Q6Q759 2223 aa11.53□□□□□ -0.56
CNKSR1-204ENST00000480348 SPTBN4Q9H254 2564 aa11.53□□□□□ -0.56
CNKSR1-204ENST00000480348 CFAP54Q96N23 3096 aa11.52□□□□□ -0.56
CNKSR1-204ENST00000480348 F11P03951 625 aa11.52□□□□□ -0.57
CNKSR1-204ENST00000480348 FAM163BP0C2L3 166 aa11.52□□□□□ -0.57
CNKSR1-204ENST00000480348 HMGA1P17096 107 aaKnown RBP11.52□□□□□ -0.57
CNKSR1-204ENST00000480348 PFKLP17858 780 aa11.52□□□□□ -0.57
CNKSR1-204ENST00000480348 SDHBP21912 280 aa11.52□□□□□ -0.57
CNKSR1-204ENST00000480348 CXCL12P48061 93 aa11.52□□□□□ -0.57
CNKSR1-204ENST00000480348 AP3M2P53677 418 aa11.52□□□□□ -0.57
CNKSR1-204ENST00000480348 FAM160A1Q05DH4 1040 aa11.52□□□□□ -0.57
CNKSR1-204ENST00000480348 PNOCQ13519 176 aa11.52□□□□□ -0.57
CNKSR1-204ENST00000480348 SOWAHAQ2M3V2 549 aa11.52□□□□□ -0.57
CNKSR1-204ENST00000480348 WDR72Q3MJ13 1102 aa11.52□□□□□ -0.57
CNKSR1-204ENST00000480348 CC2D1AQ6P1N0 951 aaPredicted RBP11.52□□□□□ -0.57
CNKSR1-204ENST00000480348 MON1AQ86VX9 555 aa11.52□□□□□ -0.57
CNKSR1-204ENST00000480348 OSTM1Q86WC4 334 aa11.52□□□□□ -0.57
CNKSR1-204ENST00000480348 PKMYT1Q99640 499 aa11.52□□□□□ -0.57
CNKSR1-204ENST00000480348 SYT15Q9BQS2 421 aa11.52□□□□□ -0.57
CNKSR1-204ENST00000480348 SNX25Q9H3E2 840 aa11.52□□□□□ -0.57
CNKSR1-204ENST00000480348 TDP1Q9NUW8 608 aa11.52□□□□□ -0.57
CNKSR1-204ENST00000480348 RMND1Q9NWS8 449 aa11.52□□□□□ -0.57
CNKSR1-204ENST00000480348 GTSE1Q9NYZ3 720 aa11.52□□□□□ -0.57
CNKSR1-204ENST00000480348 NXF1Q9UBU9 619 aaKnown RBP11.52□□□□□ -0.57
CNKSR1-204ENST00000480348 GMEB2Q9UKD1 530 aa11.52□□□□□ -0.57
CNKSR1-204ENST00000480348 GTF3C4Q9UKN8 822 aa11.52□□□□□ -0.57
CNKSR1-204ENST00000480348 MAGED2Q9UNF1 606 aaPredicted RBP11.52□□□□□ -0.57
CNKSR1-204ENST00000480348 VPS13AQ96RL7 3174 aa11.52□□□□□ -0.57
CNKSR1-204ENST00000480348 TRAV19A0A0A6YYK7 116 aa11.51□□□□□ -0.57
CNKSR1-204ENST00000480348 LRRIQ3A6PVS8 624 aaPredicted RBP11.51□□□□□ -0.57
CNKSR1-204ENST00000480348 TRIM66O15016 1216 aa11.51□□□□□ -0.57
CNKSR1-204ENST00000480348 HCRTO43612 131 aa11.51□□□□□ -0.57
CNKSR1-204ENST00000480348 SMC2O95347 1197 aa11.51□□□□□ -0.57
CNKSR1-204ENST00000480348 CST3P01034 146 aaPredicted RBP11.51□□□□□ -0.57
CNKSR1-204ENST00000480348 PDGFRBP09619 1106 aa11.51□□□□□ -0.57
CNKSR1-204ENST00000480348 WARSP23381 471 aaKnown RBP11.51□□□□□ -0.57
CNKSR1-204ENST00000480348 NR2F2P24468 414 aa11.51□□□□□ -0.57
CNKSR1-204ENST00000480348 RPL13P26373 211 aaKnown RBP11.51□□□□□ -0.57
CNKSR1-204ENST00000480348 ANXA13P27216 316 aa11.51□□□□□ -0.57
CNKSR1-204ENST00000480348 CNR2P34972 360 aa11.51□□□□□ -0.57
CNKSR1-204ENST00000480348 MYL6P60660 151 aa11.51□□□□□ -0.57
CNKSR1-204ENST00000480348 PSMC1P62191 440 aaKnown RBP11.51□□□□□ -0.57
CNKSR1-204ENST00000480348 KCNB1Q14721 858 aa11.51□□□□□ -0.57
CNKSR1-204ENST00000480348 PDGFRLQ15198 375 aa11.51□□□□□ -0.57
CNKSR1-204ENST00000480348 ZNF699Q32M78 642 aa11.51□□□□□ -0.57
CNKSR1-204ENST00000480348 FAM171BQ6P995 826 aa11.51□□□□□ -0.57
CNKSR1-204ENST00000480348 LIMS2Q7Z4I7 341 aa11.51□□□□□ -0.57
CNKSR1-204ENST00000480348 TMEM150AQ86TG1 271 aa11.51□□□□□ -0.57
CNKSR1-204ENST00000480348 SLC9A9Q8IVB4 645 aa11.51□□□□□ -0.57
CNKSR1-204ENST00000480348 SCN4BQ8IWT1 228 aa11.51□□□□□ -0.57
CNKSR1-204ENST00000480348 KIAA2013Q8IYS2 634 aa11.51□□□□□ -0.57
CNKSR1-204ENST00000480348 FMR1NBQ8N0W7 255 aaPredicted RBP11.51□□□□□ -0.57
CNKSR1-204ENST00000480348 GUF1Q8N442 669 aaKnown RBP11.51□□□□□ -0.57
CNKSR1-204ENST00000480348 MAB21L3Q8N8X9 362 aa11.51□□□□□ -0.57
CNKSR1-204ENST00000480348 PARD3BQ8TEW8 1205 aa11.51□□□□□ -0.57
CNKSR1-204ENST00000480348 ZNF516Q92618 1163 aa11.51□□□□□ -0.57
CNKSR1-204ENST00000480348 SYAP1Q96A49 352 aaPredicted RBP11.51□□□□□ -0.57
CNKSR1-204ENST00000480348 SPATA17Q96L03 361 aa11.51□□□□□ -0.57
CNKSR1-204ENST00000480348 SLC46A2Q9BY10 475 aa11.51□□□□□ -0.57
CNKSR1-204ENST00000480348 TMLHEQ9NVH6 421 aa11.51□□□□□ -0.57
CNKSR1-204ENST00000480348 DMAC2Q9NW81 257 aa11.51□□□□□ -0.57
CNKSR1-204ENST00000480348 MAGEC2Q9UBF1 373 aaPredicted RBP11.51□□□□□ -0.57
CNKSR1-204ENST00000480348 DMDP11532 3685 aa11.5□□□□□ -0.57
CNKSR1-204ENST00000480348 TACC1O75410 805 aa11.5□□□□□ -0.57
CNKSR1-204ENST00000480348 STAU1O95793 577 aaKnown RBP11.5□□□□□ -0.57
CNKSR1-204ENST00000480348 CKMP06732 381 aa11.5□□□□□ -0.57
CNKSR1-204ENST00000480348 USP17L7P0C7H9 530 aa11.5□□□□□ -0.57
CNKSR1-204ENST00000480348 TDGF1P13385 188 aa11.5□□□□□ -0.57
CNKSR1-204ENST00000480348 KRT13P13646 458 aa11.5□□□□□ -0.57
CNKSR1-204ENST00000480348 TCF3P15923 654 aa11.5□□□□□ -0.57
CNKSR1-204ENST00000480348 CYP2F1P24903 491 aa11.5□□□□□ -0.57
CNKSR1-204ENST00000480348 HOXA6P31267 233 aa11.5□□□□□ -0.57
CNKSR1-204ENST00000480348 ATICP31939 592 aa11.5□□□□□ -0.57
CNKSR1-204ENST00000480348 PPP3CCP48454 512 aa11.5□□□□□ -0.57
CNKSR1-204ENST00000480348 LMNB2Q03252 620 aa11.5□□□□□ -0.57
CNKSR1-204ENST00000480348 GRSF1Q12849 480 aaKnown RBP eCLIP11.5□□□□□ -0.57
CNKSR1-204ENST00000480348 CCINQ13939 588 aa11.5□□□□□ -0.57
CNKSR1-204ENST00000480348 DDR2Q16832 855 aa11.5□□□□□ -0.57
CNKSR1-204ENST00000480348 CCDC142Q17RM4 750 aa11.5□□□□□ -0.57
CNKSR1-204ENST00000480348 ZNF667Q5HYK9 610 aa11.5□□□□□ -0.57
CNKSR1-204ENST00000480348 TDRD10Q5VZ19 366 aaKnown RBP11.5□□□□□ -0.57
CNKSR1-204ENST00000480348 LAIR1Q6GTX8 287 aa11.5□□□□□ -0.57
CNKSR1-204ENST00000480348 TSSK4Q6SA08 328 aa11.5□□□□□ -0.57
CNKSR1-204ENST00000480348 SMYD4Q8IYR2 804 aaPredicted RBP11.5□□□□□ -0.57
CNKSR1-204ENST00000480348 CPA6Q8N4T0 437 aa11.5□□□□□ -0.57
CNKSR1-204ENST00000480348 KIAA1958Q8N8K9 716 aa11.5□□□□□ -0.57
CNKSR1-204ENST00000480348 OR6B3Q8NGW1 331 aa11.5□□□□□ -0.57
CNKSR1-204ENST00000480348 PLEKHO2Q8TD55 490 aa11.5□□□□□ -0.57
CNKSR1-204ENST00000480348 KBTBD7Q8WVZ9 684 aa11.5□□□□□ -0.57
CNKSR1-204ENST00000480348 USP13Q92995 863 aaPredicted RBP11.5□□□□□ -0.57
CNKSR1-204ENST00000480348 ATP2A3Q93084 1043 aa11.5□□□□□ -0.57
CNKSR1-204ENST00000480348 SMARCE1Q969G3 411 aa11.5□□□□□ -0.57
CNKSR1-204ENST00000480348 ZFYVE19Q96K21 471 aa11.5□□□□□ -0.57
CNKSR1-204ENST00000480348 FAM83CQ9BQN1 747 aa11.5□□□□□ -0.57
CNKSR1-204ENST00000480348 MRPL45Q9BRJ2 306 aaKnown RBP11.5□□□□□ -0.57
CNKSR1-204ENST00000480348 GZF1Q9H116 711 aaPredicted RBP11.5□□□□□ -0.57
CNKSR1-204ENST00000480348 CIZ1Q9ULV3 898 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms