RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 PCDHB2Q9Y5E7 798 aa13.97□□□□□ -0.17
PDZRN3-208ENST00000479530 IVNS1ABPQ9Y6Y0 642 aa13.97□□□□□ -0.17
PDZRN3-208ENST00000479530 LGR5O75473 907 aa13.96□□□□□ -0.17
PDZRN3-208ENST00000479530 PSMG1O95456 288 aa13.96□□□□□ -0.17
PDZRN3-208ENST00000479530 GTF2H1P32780 548 aa13.96□□□□□ -0.17
PDZRN3-208ENST00000479530 TNFSF9P41273 254 aa13.96□□□□□ -0.17
PDZRN3-208ENST00000479530 NEK3P51956 506 aa13.96□□□□□ -0.17
PDZRN3-208ENST00000479530 GEMIN4P57678 1058 aaKnown RBP13.96□□□□□ -0.17
PDZRN3-208ENST00000479530 SLC34A1Q06495 639 aa13.96□□□□□ -0.17
PDZRN3-208ENST00000479530 ZNF394Q53GI3 561 aa13.96□□□□□ -0.17
PDZRN3-208ENST00000479530 EFHC2Q5JST6 749 aa13.96□□□□□ -0.17
PDZRN3-208ENST00000479530 FNBP1LQ5T0N5 605 aa13.96□□□□□ -0.17
PDZRN3-208ENST00000479530 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.96□□□□□ -0.17
PDZRN3-208ENST00000479530 MZB1Q8WU39 189 aa13.96□□□□□ -0.17
PDZRN3-208ENST00000479530 SLITRK1Q96PX8 696 aa13.96□□□□□ -0.17
PDZRN3-208ENST00000479530 MANSC1Q9H8J5 431 aa13.96□□□□□ -0.17
PDZRN3-208ENST00000479530 SPATA31C2B4DYI2 1134 aa13.96□□□□□ -0.17
PDZRN3-208ENST00000479530 LMNAP02545 664 aaKnown RBP13.96□□□□□ -0.17
PDZRN3-208ENST00000479530 TROVE2P10155 538 aaKnown RBP eCLIP13.96□□□□□ -0.17
PDZRN3-208ENST00000479530 OCRLQ01968 901 aa13.96□□□□□ -0.17
PDZRN3-208ENST00000479530 TNFAIP1Q13829 316 aa13.96□□□□□ -0.17
PDZRN3-208ENST00000479530 PSMD6Q15008 389 aa13.96□□□□□ -0.17
PDZRN3-208ENST00000479530 EAPPQ56P03 285 aaPredicted RBP13.96□□□□□ -0.17
PDZRN3-208ENST00000479530 SPDYAQ5MJ70 313 aa13.96□□□□□ -0.17
PDZRN3-208ENST00000479530 MCPH1Q8NEM0 835 aa13.96□□□□□ -0.17
PDZRN3-208ENST00000479530 PAFAH2Q99487 392 aa13.96□□□□□ -0.17
PDZRN3-208ENST00000479530 TMEM120AQ9BXJ8 343 aa13.96□□□□□ -0.17
PDZRN3-208ENST00000479530 RBAKQ9NYW8 714 aaPredicted RBP13.96□□□□□ -0.17
PDZRN3-208ENST00000479530 PIM2Q9P1W9 311 aa13.96□□□□□ -0.17
PDZRN3-208ENST00000479530 RPL26L1Q9UNX3 145 aaKnown RBP13.96□□□□□ -0.17
PDZRN3-208ENST00000479530 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.96□□□□□ -0.17
PDZRN3-208ENST00000479530 ZWINTO95229 277 aa13.95□□□□□ -0.18
PDZRN3-208ENST00000479530 ITGBL1O95965 494 aaPredicted RBP13.95□□□□□ -0.18
PDZRN3-208ENST00000479530 SUPT20HL2P0C7V6 817 aa13.95□□□□□ -0.18
PDZRN3-208ENST00000479530 CACNA2D1P54289 1103 aa13.95□□□□□ -0.18
PDZRN3-208ENST00000479530 GDF10P55107 478 aa13.95□□□□□ -0.18
PDZRN3-208ENST00000479530 ZNF252P-AS1Q0IIN9 211 aa13.95□□□□□ -0.18
PDZRN3-208ENST00000479530 THOC5Q13769 683 aaKnown RBP13.95□□□□□ -0.18
PDZRN3-208ENST00000479530 SUPT20HL1Q3ZLR7 823 aa13.95□□□□□ -0.18
PDZRN3-208ENST00000479530 WDR44Q5JSH3 913 aa13.95□□□□□ -0.18
PDZRN3-208ENST00000479530 ANGEL2Q5VTE6 544 aaKnown RBP13.95□□□□□ -0.18
PDZRN3-208ENST00000479530 EEPD1Q7L9B9 569 aa13.95□□□□□ -0.18
PDZRN3-208ENST00000479530 MFN1Q8IWA4 741 aa13.95□□□□□ -0.18
PDZRN3-208ENST00000479530 VPS52Q8N1B4 723 aa13.95□□□□□ -0.18
PDZRN3-208ENST00000479530 MCUR1Q96AQ8 359 aa13.95□□□□□ -0.18
PDZRN3-208ENST00000479530 SKA1Q96BD8 255 aa13.95□□□□□ -0.18
PDZRN3-208ENST00000479530 NSL1Q96IY1 281 aa13.95□□□□□ -0.18
PDZRN3-208ENST00000479530 FOXP3Q9BZS1 431 aa13.95□□□□□ -0.18
PDZRN3-208ENST00000479530 CPSF2Q9P2I0 782 aaKnown RBP13.95□□□□□ -0.18
PDZRN3-208ENST00000479530 SLC24A2Q9UI40 661 aa13.95□□□□□ -0.18
PDZRN3-208ENST00000479530 E5RJQ4 531 aa13.95□□□□□ -0.18
PDZRN3-208ENST00000479530 F8VP50 259 aa13.95□□□□□ -0.18
PDZRN3-208ENST00000479530 UBTFL6P0CB48 400 aaPredicted RBP13.95□□□□□ -0.18
PDZRN3-208ENST00000479530 ARFIP2P53365 341 aa13.95□□□□□ -0.18
PDZRN3-208ENST00000479530 NOMO3P69849 1222 aa13.95□□□□□ -0.18
PDZRN3-208ENST00000479530 CLDN10P78369 228 aa13.95□□□□□ -0.18
PDZRN3-208ENST00000479530 PLCB3Q01970 1234 aa13.95□□□□□ -0.18
PDZRN3-208ENST00000479530 CUL2Q13617 745 aa13.95□□□□□ -0.18
PDZRN3-208ENST00000479530 MORF4L2Q15014 288 aa13.95□□□□□ -0.18
PDZRN3-208ENST00000479530 OASLQ15646 514 aaKnown RBP13.95□□□□□ -0.18
PDZRN3-208ENST00000479530 POTEAQ6S8J7 498 aa13.95□□□□□ -0.18
PDZRN3-208ENST00000479530 CENPUQ71F23 418 aa13.95□□□□□ -0.18
PDZRN3-208ENST00000479530 ZBTB33Q86T24 672 aa13.95□□□□□ -0.18
PDZRN3-208ENST00000479530 BANPQ8N9N5 519 aa13.95□□□□□ -0.18
PDZRN3-208ENST00000479530 RDM1Q8NG50 284 aa13.95□□□□□ -0.18
PDZRN3-208ENST00000479530 PCYT2Q99447 389 aa13.95□□□□□ -0.18
PDZRN3-208ENST00000479530 C17orf75Q9HAS0 396 aa13.95□□□□□ -0.18
PDZRN3-208ENST00000479530 ARHGEF4Q9NR80 690 aa13.95□□□□□ -0.18
PDZRN3-208ENST00000479530 RGS17Q9UGC6 210 aaPredicted RBP13.95□□□□□ -0.18
PDZRN3-208ENST00000479530 SCOCQ9UIL1 159 aa13.95□□□□□ -0.18
PDZRN3-208ENST00000479530 ADAMTS5Q9UNA0 930 aa13.95□□□□□ -0.18
PDZRN3-208ENST00000479530 TCRBV7S3A2A0A539 114 aa13.94□□□□□ -0.18
PDZRN3-208ENST00000479530 K7ERI5 159 aa13.94□□□□□ -0.18
PDZRN3-208ENST00000479530 SGK1O00141 431 aa13.94□□□□□ -0.18
PDZRN3-208ENST00000479530 TJP3O95049 919 aa13.94□□□□□ -0.18
PDZRN3-208ENST00000479530 KRT1P04264 644 aa13.94□□□□□ -0.18
PDZRN3-208ENST00000479530 GNA15P30679 374 aa13.94□□□□□ -0.18
PDZRN3-208ENST00000479530 SEPT7Q16181 437 aaKnown RBP13.94□□□□□ -0.18
PDZRN3-208ENST00000479530 XKR3Q5GH77 459 aa13.94□□□□□ -0.18
PDZRN3-208ENST00000479530 C3orf62Q6ZUJ4 267 aa13.94□□□□□ -0.18
PDZRN3-208ENST00000479530 ALYREFQ86V81 257 aaKnown RBP13.94□□□□□ -0.18
PDZRN3-208ENST00000479530 GATA6Q92908 595 aa13.94□□□□□ -0.18
PDZRN3-208ENST00000479530 MSTO1Q9BUK6 570 aa13.94□□□□□ -0.18
PDZRN3-208ENST00000479530 TSSK1BQ9BXA7 367 aa13.94□□□□□ -0.18
PDZRN3-208ENST00000479530 VCXQ9H320 206 aa13.94□□□□□ -0.18
PDZRN3-208ENST00000479530 PICK1Q9NRD5 415 aa13.94□□□□□ -0.18
PDZRN3-208ENST00000479530 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.94□□□□□ -0.18
PDZRN3-208ENST00000479530 CNTNAP2Q9UHC6 1331 aa13.94□□□□□ -0.18
PDZRN3-208ENST00000479530 DLDP09622 509 aaKnown RBP13.94□□□□□ -0.18
PDZRN3-208ENST00000479530 ZCCHC18P0CG32 403 aa13.94□□□□□ -0.18
PDZRN3-208ENST00000479530 SKIP12755 728 aa13.94□□□□□ -0.18
PDZRN3-208ENST00000479530 NRLP54845 237 aa13.94□□□□□ -0.18
PDZRN3-208ENST00000479530 ZBTB16Q05516 673 aa13.94□□□□□ -0.18
PDZRN3-208ENST00000479530 HIF1AQ16665 826 aa13.94□□□□□ -0.18
PDZRN3-208ENST00000479530 MDH1BQ5I0G3 518 aa13.94□□□□□ -0.18
PDZRN3-208ENST00000479530 PLEKHA7Q6IQ23 1121 aa13.94□□□□□ -0.18
PDZRN3-208ENST00000479530 ABRAQ8N0Z2 381 aa13.94□□□□□ -0.18
PDZRN3-208ENST00000479530 ZNF398Q8TD17 642 aa13.94□□□□□ -0.18
PDZRN3-208ENST00000479530 TRIM55Q9BYV6 548 aa13.94□□□□□ -0.18
PDZRN3-208ENST00000479530 NMUR2Q9GZQ4 415 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms