RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 GCLCP48506 637 aaPredicted RBP11.35□□□□□ -0.59
VPS52-217ENST00000478934 COPS2P61201 443 aa11.35□□□□□ -0.59
VPS52-217ENST00000478934 CDO1Q16878 200 aa11.35□□□□□ -0.59
VPS52-217ENST00000478934 C15orf59Q2T9L4 293 aaPredicted RBP11.35□□□□□ -0.59
VPS52-217ENST00000478934 IGDCC3Q8IVU1 814 aa11.35□□□□□ -0.59
VPS52-217ENST00000478934 CCDC33Q8N5R6 958 aa11.35□□□□□ -0.59
VPS52-217ENST00000478934 GIMAP7Q8NHV1 300 aa11.35□□□□□ -0.59
VPS52-217ENST00000478934 SLC35B2Q8TB61 432 aa11.35□□□□□ -0.59
VPS52-217ENST00000478934 CPT1BQ92523 772 aa11.35□□□□□ -0.59
VPS52-217ENST00000478934 MYCBPQ99417 103 aaPredicted RBP11.35□□□□□ -0.59
VPS52-217ENST00000478934 FDXACB1Q9BRP7 624 aaPredicted RBP11.35□□□□□ -0.59
VPS52-217ENST00000478934 CALN1Q9BXU9 219 aa11.35□□□□□ -0.59
VPS52-217ENST00000478934 FZD8Q9H461 694 aa11.35□□□□□ -0.59
VPS52-217ENST00000478934 ARL2BPQ9Y2Y0 163 aa11.35□□□□□ -0.59
VPS52-217ENST00000478934 PAPPA2Q9BXP8 1791 aa11.35□□□□□ -0.59
VPS52-217ENST00000478934 FAM47DPA6NHR8 397 aa11.35□□□□□ -0.59
VPS52-217ENST00000478934 AVILO75366 819 aa11.35□□□□□ -0.59
VPS52-217ENST00000478934 MICAL2O94851 1124 aa11.35□□□□□ -0.59
VPS52-217ENST00000478934 TMEM63AO94886 807 aa11.35□□□□□ -0.59
VPS52-217ENST00000478934 STAG3L1P0CL83 205 aa11.35□□□□□ -0.59
VPS52-217ENST00000478934 CYP3A5P20815 502 aa11.35□□□□□ -0.59
VPS52-217ENST00000478934 ATP5DP30049 168 aa11.35□□□□□ -0.59
VPS52-217ENST00000478934 MIPP30301 263 aa11.35□□□□□ -0.59
VPS52-217ENST00000478934 MXD4Q14582 209 aaPredicted RBP11.35□□□□□ -0.59
VPS52-217ENST00000478934 CCDC142Q17RM4 750 aa11.35□□□□□ -0.59
VPS52-217ENST00000478934 ZC3H18Q86VM9 953 aaKnown RBP11.35□□□□□ -0.59
VPS52-217ENST00000478934 BBOF1Q8ND07 529 aa11.35□□□□□ -0.59
VPS52-217ENST00000478934 KCNN1Q92952 543 aa11.35□□□□□ -0.59
VPS52-217ENST00000478934 ANKRD36BP1Q96IX9 119 aa11.35□□□□□ -0.59
VPS52-217ENST00000478934 CFAP57Q96MR6 1250 aa11.35□□□□□ -0.59
VPS52-217ENST00000478934 LBHD1Q9BQE6 289 aaPredicted RBP11.35□□□□□ -0.59
VPS52-217ENST00000478934 CCDC77Q9BR77 488 aa11.35□□□□□ -0.59
VPS52-217ENST00000478934 MAGEB5Q9BZ81 275 aa11.35□□□□□ -0.59
VPS52-217ENST00000478934 IFT122Q9HBG6 1241 aa11.35□□□□□ -0.59
VPS52-217ENST00000478934 GPATCH2LQ9NWQ4 482 aa11.35□□□□□ -0.59
VPS52-217ENST00000478934 PCDHGC3Q9UN70 934 aa11.35□□□□□ -0.59
VPS52-217ENST00000478934 CSADQ9Y600 493 aa11.35□□□□□ -0.59
VPS52-217ENST00000478934 MCM3APO60318 1980 aa11.34□□□□□ -0.59
VPS52-217ENST00000478934 SIGLEC16A6NMB1 481 aa11.34□□□□□ -0.59
VPS52-217ENST00000478934 TGFB3P10600 412 aa11.34□□□□□ -0.59
VPS52-217ENST00000478934 TARSP26639 723 aaKnown RBP11.34□□□□□ -0.59
VPS52-217ENST00000478934 CDH5P33151 784 aaPredicted RBP11.34□□□□□ -0.59
VPS52-217ENST00000478934 RGS7P49802 495 aa11.34□□□□□ -0.59
VPS52-217ENST00000478934 BNIP1Q12981 228 aa11.34□□□□□ -0.59
VPS52-217ENST00000478934 GALNTL6Q49A17 601 aa11.34□□□□□ -0.59
VPS52-217ENST00000478934 ZNF667Q5HYK9 610 aa11.34□□□□□ -0.59
VPS52-217ENST00000478934 WLSQ5T9L3 541 aa11.34□□□□□ -0.59
VPS52-217ENST00000478934 LRRC38Q5VT99 294 aa11.34□□□□□ -0.59
VPS52-217ENST00000478934 ARHGEF18Q6ZSZ5 1173 aa11.34□□□□□ -0.59
VPS52-217ENST00000478934 RFX6Q8HWS3 928 aa11.34□□□□□ -0.59
VPS52-217ENST00000478934 RELL1Q8IUW5 271 aa11.34□□□□□ -0.59
VPS52-217ENST00000478934 KCTD6Q8NC69 237 aa11.34□□□□□ -0.59
VPS52-217ENST00000478934 NKD2Q969F2 451 aaPredicted RBP11.34□□□□□ -0.59
VPS52-217ENST00000478934 HEXIM2Q96MH2 286 aaKnown RBP11.34□□□□□ -0.59
VPS52-217ENST00000478934 RPF1Q9H9Y2 349 aaKnown RBP11.34□□□□□ -0.59
VPS52-217ENST00000478934 PRKAG3Q9UGI9 489 aa11.34□□□□□ -0.59
VPS52-217ENST00000478934 SIP14410 1827 aa11.34□□□□□ -0.59
VPS52-217ENST00000478934 EVPLQ92817 2033 aa11.34□□□□□ -0.59
VPS52-217ENST00000478934 M0QYV0 167 aa11.34□□□□□ -0.59
VPS52-217ENST00000478934 ALOX15BO15296 676 aa11.34□□□□□ -0.59
VPS52-217ENST00000478934 ASMTLO95671 621 aa11.34□□□□□ -0.59
VPS52-217ENST00000478934 ITGAVP06756 1048 aa11.34□□□□□ -0.59
VPS52-217ENST00000478934 ZNF286BP0CG31 522 aa11.34□□□□□ -0.59
VPS52-217ENST00000478934 INSRRP14616 1297 aa11.34□□□□□ -0.59
VPS52-217ENST00000478934 EZRP15311 586 aaKnown RBP11.34□□□□□ -0.59
VPS52-217ENST00000478934 CA4P22748 312 aa11.34□□□□□ -0.59
VPS52-217ENST00000478934 POLR2BP30876 1174 aaKnown RBP11.34□□□□□ -0.59
VPS52-217ENST00000478934 YWHAEP62258 255 aaKnown RBP11.34□□□□□ -0.59
VPS52-217ENST00000478934 BBS9Q3SYG4 887 aa11.34□□□□□ -0.59
VPS52-217ENST00000478934 CCDC62Q6P9F0 684 aa11.34□□□□□ -0.59
VPS52-217ENST00000478934 ZNF449Q6P9G9 518 aa11.34□□□□□ -0.59
VPS52-217ENST00000478934 CXorf38Q8TB03 319 aa11.34□□□□□ -0.59
VPS52-217ENST00000478934 KCNV2Q8TDN2 545 aa11.34□□□□□ -0.59
VPS52-217ENST00000478934 ERP27Q96DN0 273 aa11.34□□□□□ -0.59
VPS52-217ENST00000478934 MAGEB18Q96M61 343 aa11.34□□□□□ -0.59
VPS52-217ENST00000478934 MYLK2Q9H1R3 596 aa11.34□□□□□ -0.59
VPS52-217ENST00000478934 KLHL14Q9P2G3 628 aa11.34□□□□□ -0.59
VPS52-217ENST00000478934 DRG1Q9Y295 367 aaKnown RBP11.34□□□□□ -0.59
VPS52-217ENST00000478934 FARP1Q9Y4F1 1045 aaPredicted RBP11.34□□□□□ -0.59
VPS52-217ENST00000478934 CEP83Q9Y592 693 aa11.34□□□□□ -0.59
VPS52-217ENST00000478934 HCRTO43612 131 aa11.33□□□□□ -0.6
VPS52-217ENST00000478934 B4GALT4O60513 344 aa11.33□□□□□ -0.6
VPS52-217ENST00000478934 LGR5O75473 907 aa11.33□□□□□ -0.6
VPS52-217ENST00000478934 GSTA1P08263 222 aa11.33□□□□□ -0.6
VPS52-217ENST00000478934 CYP2C8P10632 490 aa11.33□□□□□ -0.6
VPS52-217ENST00000478934 AP3M2P53677 418 aa11.33□□□□□ -0.6
VPS52-217ENST00000478934 LMNB2Q03252 620 aa11.33□□□□□ -0.6
VPS52-217ENST00000478934 PTPN11Q06124 597 aaPredicted RBP11.33□□□□□ -0.6
VPS52-217ENST00000478934 OVGP1Q12889 678 aa11.33□□□□□ -0.6
VPS52-217ENST00000478934 MORF4L2Q15014 288 aa11.33□□□□□ -0.6
VPS52-217ENST00000478934 HIF1AQ16665 826 aa11.33□□□□□ -0.6
VPS52-217ENST00000478934 SLC10A6Q3KNW5 377 aa11.33□□□□□ -0.6
VPS52-217ENST00000478934 DRICH1Q6PGQ1 229 aaPredicted RBP11.33□□□□□ -0.6
VPS52-217ENST00000478934 C1orf228Q6PIY5 440 aa11.33□□□□□ -0.6
VPS52-217ENST00000478934 C3orf62Q6ZUJ4 267 aa11.33□□□□□ -0.6
VPS52-217ENST00000478934 NIPA2Q8N8Q9 360 aa11.33□□□□□ -0.6
VPS52-217ENST00000478934 FBXO36Q8NEA4 188 aa11.33□□□□□ -0.6
VPS52-217ENST00000478934 DENND1AQ8TEH3 1009 aa11.33□□□□□ -0.6
VPS52-217ENST00000478934 ETNK1Q9HBU6 452 aa11.33□□□□□ -0.6
VPS52-217ENST00000478934 RABGEF1Q9UJ41 708 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms