RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 OR5B17Q8NGF7 314 aa15.44■□□□□ 0.06
SMARCE1-209ENST00000478349 MYLPFQ96A32 169 aa15.44■□□□□ 0.06
SMARCE1-209ENST00000478349 SYAP1Q96A49 352 aaPredicted RBP15.44■□□□□ 0.06
SMARCE1-209ENST00000478349 EBF3Q9H4W6 596 aa15.44■□□□□ 0.06
SMARCE1-209ENST00000478349 DLL3Q9NYJ7 618 aa15.44■□□□□ 0.06
SMARCE1-209ENST00000478349 TRPM5Q9NZQ8 1165 aa15.44■□□□□ 0.06
SMARCE1-209ENST00000478349 SLC8A2Q9UPR5 921 aa15.44■□□□□ 0.06
SMARCE1-209ENST00000478349 CACNA1IQ9P0X4 2223 aa15.44■□□□□ 0.06
SMARCE1-209ENST00000478349 CCDC163A0A0D9SF12 145 aa15.43■□□□□ 0.06
SMARCE1-209ENST00000478349 TRDMT1O14717 391 aaKnown RBP15.43■□□□□ 0.06
SMARCE1-209ENST00000478349 EXOC3O60645 756 aa15.43■□□□□ 0.06
SMARCE1-209ENST00000478349 PHACTR2O75167 634 aa15.43■□□□□ 0.06
SMARCE1-209ENST00000478349 TACC1O75410 805 aa15.43■□□□□ 0.06
SMARCE1-209ENST00000478349 CYP24A1Q07973 514 aa15.43■□□□□ 0.06
SMARCE1-209ENST00000478349 USP4Q13107 963 aa15.43■□□□□ 0.06
SMARCE1-209ENST00000478349 BMT2Q1RMZ1 405 aa15.43■□□□□ 0.06
SMARCE1-209ENST00000478349 RSPO4Q2I0M5 234 aaPredicted RBP15.43■□□□□ 0.06
SMARCE1-209ENST00000478349 TMEM196Q5HYL7 178 aa15.43■□□□□ 0.06
SMARCE1-209ENST00000478349 SDHAF4Q5VUM1 108 aa15.43■□□□□ 0.06
SMARCE1-209ENST00000478349 DENND5BQ6ZUT9 1274 aa15.43■□□□□ 0.06
SMARCE1-209ENST00000478349 LIMS2Q7Z4I7 341 aa15.43■□□□□ 0.06
SMARCE1-209ENST00000478349 WDR5BQ86VZ2 330 aa15.43■□□□□ 0.06
SMARCE1-209ENST00000478349 OSTM1Q86WC4 334 aa15.43■□□□□ 0.06
SMARCE1-209ENST00000478349 NELFCDQ8IXH7 590 aa15.43■□□□□ 0.06
SMARCE1-209ENST00000478349 C12orf56Q8IXR9 622 aa15.43■□□□□ 0.06
SMARCE1-209ENST00000478349 KIAA1958Q8N8K9 716 aa15.43■□□□□ 0.06
SMARCE1-209ENST00000478349 MYCBPAPQ8TBZ2 947 aa15.43■□□□□ 0.06
SMARCE1-209ENST00000478349 OSCP1Q8WVF1 389 aa15.43■□□□□ 0.06
SMARCE1-209ENST00000478349 KBTBD7Q8WVZ9 684 aa15.43■□□□□ 0.06
SMARCE1-209ENST00000478349 HPS3Q969F9 1004 aa15.43■□□□□ 0.06
SMARCE1-209ENST00000478349 ACDQ96AP0 544 aa15.43■□□□□ 0.06
SMARCE1-209ENST00000478349 CCDC127Q96BQ5 260 aa15.43■□□□□ 0.06
SMARCE1-209ENST00000478349 ELOVL4Q9GZR5 314 aa15.43■□□□□ 0.06
SMARCE1-209ENST00000478349 EXOC1Q9NV70 894 aa15.43■□□□□ 0.06
SMARCE1-209ENST00000478349 DUS2Q9NX74 493 aaKnown RBP15.43■□□□□ 0.06
SMARCE1-209ENST00000478349 CCL26Q9Y258 94 aa15.43■□□□□ 0.06
SMARCE1-209ENST00000478349 TICRRQ7Z2Z1 1910 aa15.43■□□□□ 0.06
SMARCE1-209ENST00000478349 NUP210Q8TEM1 1887 aaPredicted RBP15.42■□□□□ 0.06
SMARCE1-209ENST00000478349 CHURC1-FNTBB4DL54 471 aa15.42■□□□□ 0.06
SMARCE1-209ENST00000478349 KIF20AO95235 890 aa15.42■□□□□ 0.06
SMARCE1-209ENST00000478349 NFATC1O95644 943 aa15.42■□□□□ 0.06
SMARCE1-209ENST00000478349 STAU1O95793 577 aaKnown RBP15.42■□□□□ 0.06
SMARCE1-209ENST00000478349 MYL1P05976 194 aa15.42■□□□□ 0.06
SMARCE1-209ENST00000478349 P4HA1P13674 534 aa15.42■□□□□ 0.06
SMARCE1-209ENST00000478349 TCF3P15923 654 aa15.42■□□□□ 0.06
SMARCE1-209ENST00000478349 GNL1P36915 607 aaPredicted RBP15.42■□□□□ 0.06
SMARCE1-209ENST00000478349 FNTBP49356 437 aa15.42■□□□□ 0.06
SMARCE1-209ENST00000478349 PSMC1P62191 440 aaKnown RBP15.42■□□□□ 0.06
SMARCE1-209ENST00000478349 GAS6Q14393 721 aa15.42■□□□□ 0.06
SMARCE1-209ENST00000478349 KNOP1Q1ED39 458 aaKnown RBP15.42■□□□□ 0.06
SMARCE1-209ENST00000478349 WDR72Q3MJ13 1102 aa15.42■□□□□ 0.06
SMARCE1-209ENST00000478349 FOXD4L5Q5VV16 416 aaPredicted RBP15.42■□□□□ 0.06
SMARCE1-209ENST00000478349 RESP18Q5W5W9 173 aa15.42■□□□□ 0.06
SMARCE1-209ENST00000478349 RDH13Q8NBN7 331 aa15.42■□□□□ 0.06
SMARCE1-209ENST00000478349 GLIS3Q8NEA6 775 aa15.42■□□□□ 0.06
SMARCE1-209ENST00000478349 TTC16Q8NEE8 873 aa15.42■□□□□ 0.06
SMARCE1-209ENST00000478349 OR6B3Q8NGW1 331 aa15.42■□□□□ 0.06
SMARCE1-209ENST00000478349 SCFD1Q8WVM8 642 aa15.42■□□□□ 0.06
SMARCE1-209ENST00000478349 FOXD4L4Q8WXT5 416 aaPredicted RBP15.42■□□□□ 0.06
SMARCE1-209ENST00000478349 CCDC47Q96A33 483 aaKnown RBP15.42■□□□□ 0.06
SMARCE1-209ENST00000478349 SLITRK1Q96PX8 696 aa15.42■□□□□ 0.06
SMARCE1-209ENST00000478349 P2RY13Q9BPV8 354 aa15.42■□□□□ 0.06
SMARCE1-209ENST00000478349 HPS4Q9NQG7 708 aa15.42■□□□□ 0.06
SMARCE1-209ENST00000478349 USP25Q9UHP3 1055 aa15.42■□□□□ 0.06
SMARCE1-209ENST00000478349 ARHGAP26Q9UNA1 814 aa15.42■□□□□ 0.06
SMARCE1-209ENST00000478349 GPR179Q6PRD1 2367 aa15.42■□□□□ 0.06
SMARCE1-209ENST00000478349 PTPRJQ12913 1337 aa15.42■□□□□ 0.06
SMARCE1-209ENST00000478349 SCN1AP35498 2009 aa15.41■□□□□ 0.06
SMARCE1-209ENST00000478349 FANCMQ8IYD8 2048 aa15.41■□□□□ 0.06
SMARCE1-209ENST00000478349 K7ESF4 209 aa15.41■□□□□ 0.06
SMARCE1-209ENST00000478349 TGFB1I1O43294 461 aa15.41■□□□□ 0.06
SMARCE1-209ENST00000478349 TADA3O75528 432 aa15.41■□□□□ 0.06
SMARCE1-209ENST00000478349 PDGFRBP09619 1106 aa15.41■□□□□ 0.06
SMARCE1-209ENST00000478349 HDCP19113 662 aa15.41■□□□□ 0.06
SMARCE1-209ENST00000478349 BDNFP23560 247 aa15.41■□□□□ 0.06
SMARCE1-209ENST00000478349 NOP14P78316 857 aaKnown RBP15.41■□□□□ 0.06
SMARCE1-209ENST00000478349 PSMD2Q13200 908 aa15.41■□□□□ 0.06
SMARCE1-209ENST00000478349 BIRC3Q13489 604 aa15.41■□□□□ 0.06
SMARCE1-209ENST00000478349 ZNF77Q15935 545 aa15.41■□□□□ 0.06
SMARCE1-209ENST00000478349 MDH1BQ5I0G3 518 aa15.41■□□□□ 0.06
SMARCE1-209ENST00000478349 HEATR6Q6AI08 1181 aaKnown RBP15.41■□□□□ 0.06
SMARCE1-209ENST00000478349 TRIM68Q6AZZ1 485 aa15.41■□□□□ 0.06
SMARCE1-209ENST00000478349 DDX42Q86XP3 938 aaKnown RBP eCLIP15.41■□□□□ 0.06
SMARCE1-209ENST00000478349 CAMKK1Q8N5S9 505 aa15.41■□□□□ 0.06
SMARCE1-209ENST00000478349 PDZD8Q8NEN9 1154 aa15.41■□□□□ 0.06
SMARCE1-209ENST00000478349 TNIP3Q96KP6 325 aa15.41■□□□□ 0.06
SMARCE1-209ENST00000478349 C8orf48Q96LL4 319 aa15.41■□□□□ 0.06
SMARCE1-209ENST00000478349 RTKNQ9BST9 563 aa15.41■□□□□ 0.06
SMARCE1-209ENST00000478349 ECT2Q9H8V3 914 aa15.41■□□□□ 0.06
SMARCE1-209ENST00000478349 SLC39A2Q9NP94 309 aa15.41■□□□□ 0.06
SMARCE1-209ENST00000478349 ANK1P16157 1881 aa15.41■□□□□ 0.06
SMARCE1-209ENST00000478349 CACNA1AO00555 2505 aa15.41■□□□□ 0.06
SMARCE1-209ENST00000478349 A8MXQ7 604 aa15.4■□□□□ 0.06
SMARCE1-209ENST00000478349 SLC9A3R1O14745 358 aaPredicted RBP15.4■□□□□ 0.06
SMARCE1-209ENST00000478349 CLIC2O15247 247 aa15.4■□□□□ 0.06
SMARCE1-209ENST00000478349 AKAP3O75969 853 aa15.4■□□□□ 0.06
SMARCE1-209ENST00000478349 SLFN14P0C7P3 912 aa15.4■□□□□ 0.06
SMARCE1-209ENST00000478349 HOXD13P35453 343 aa15.4■□□□□ 0.06
SMARCE1-209ENST00000478349 AFMP43652 599 aa15.4■□□□□ 0.06
SMARCE1-209ENST00000478349 EHHADHQ08426 723 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms