RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 ZSCAN16Q9H4T2 348 aaPredicted RBP17.9■□□□□ 0.46
TRIM13-208ENST00000478111 ECT2Q9H8V3 914 aa17.9■□□□□ 0.46
TRIM13-208ENST00000478111 CRTAC1Q9NQ79 661 aa17.9■□□□□ 0.46
TRIM13-208ENST00000478111 NME7Q9Y5B8 376 aa17.9■□□□□ 0.46
TRIM13-208ENST00000478111 MYOFQ9NZM1 2061 aa17.9■□□□□ 0.46
TRIM13-208ENST00000478111 C2orf78A6NCI8 922 aa17.89■□□□□ 0.45
TRIM13-208ENST00000478111 ZNF233A6NK53 670 aa17.89■□□□□ 0.45
TRIM13-208ENST00000478111 ATG13O75143 517 aa17.89■□□□□ 0.45
TRIM13-208ENST00000478111 USP17L7P0C7H9 530 aa17.89■□□□□ 0.45
TRIM13-208ENST00000478111 DRD1P21728 446 aa17.89■□□□□ 0.45
TRIM13-208ENST00000478111 RAP1GAPP47736 663 aa17.89■□□□□ 0.45
TRIM13-208ENST00000478111 USP4Q13107 963 aa17.89■□□□□ 0.45
TRIM13-208ENST00000478111 EML3Q32P44 896 aa17.89■□□□□ 0.45
TRIM13-208ENST00000478111 SCN4BQ8IWT1 228 aa17.89■□□□□ 0.45
TRIM13-208ENST00000478111 ZNF507Q8TCN5 953 aa17.89■□□□□ 0.45
TRIM13-208ENST00000478111 OSCP1Q8WVF1 389 aa17.89■□□□□ 0.45
TRIM13-208ENST00000478111 GAB3Q8WWW8 586 aa17.89■□□□□ 0.45
TRIM13-208ENST00000478111 SYT15Q9BQS2 421 aa17.89■□□□□ 0.45
TRIM13-208ENST00000478111 TRIM9Q9C026 710 aa17.89■□□□□ 0.45
TRIM13-208ENST00000478111 TRPC7Q9HCX4 862 aa17.89■□□□□ 0.45
TRIM13-208ENST00000478111 FOXD4L1Q9NU39 408 aa17.89■□□□□ 0.45
TRIM13-208ENST00000478111 HSPBP1Q9NZL4 362 aa17.89■□□□□ 0.45
TRIM13-208ENST00000478111 CEP295Q9C0D2 2601 aa17.89■□□□□ 0.45
TRIM13-208ENST00000478111 TRAV19A0A0A6YYK7 116 aa17.88■□□□□ 0.45
TRIM13-208ENST00000478111 TGFB1I1O43294 461 aa17.88■□□□□ 0.45
TRIM13-208ENST00000478111 STX6O43752 255 aa17.88■□□□□ 0.45
TRIM13-208ENST00000478111 CST3P01034 146 aaPredicted RBP17.88■□□□□ 0.45
TRIM13-208ENST00000478111 CKMP06732 381 aa17.88■□□□□ 0.45
TRIM13-208ENST00000478111 WARSP23381 471 aaKnown RBP17.88■□□□□ 0.45
TRIM13-208ENST00000478111 PSMC1P62191 440 aaKnown RBP17.88■□□□□ 0.45
TRIM13-208ENST00000478111 ZXDBP98169 803 aa17.88■□□□□ 0.45
TRIM13-208ENST00000478111 AMPD2Q01433 879 aa17.88■□□□□ 0.45
TRIM13-208ENST00000478111 MYO1EQ12965 1108 aa17.88■□□□□ 0.45
TRIM13-208ENST00000478111 SURF1Q15526 300 aa17.88■□□□□ 0.45
TRIM13-208ENST00000478111 DUOXA2Q1HG44 320 aa17.88■□□□□ 0.45
TRIM13-208ENST00000478111 KBTBD6Q86V97 674 aa17.88■□□□□ 0.45
TRIM13-208ENST00000478111 ABCA7Q8IZY2 2146 aa17.88■□□□□ 0.45
TRIM13-208ENST00000478111 ARL14EPQ8N8R7 260 aaPredicted RBP17.88■□□□□ 0.45
TRIM13-208ENST00000478111 MYLPFQ96A32 169 aa17.88■□□□□ 0.45
TRIM13-208ENST00000478111 SPATA17Q96L03 361 aa17.88■□□□□ 0.45
TRIM13-208ENST00000478111 CNTNAP3BQ96NU0 1288 aa17.88■□□□□ 0.45
TRIM13-208ENST00000478111 P2RY13Q9BPV8 354 aa17.88■□□□□ 0.45
TRIM13-208ENST00000478111 CNTNAP3Q9BZ76 1288 aa17.88■□□□□ 0.45
TRIM13-208ENST00000478111 DUS2Q9NX74 493 aaKnown RBP17.88■□□□□ 0.45
TRIM13-208ENST00000478111 MAGEC2Q9UBF1 373 aaPredicted RBP17.88■□□□□ 0.45
TRIM13-208ENST00000478111 CDH9Q9ULB4 789 aa17.88■□□□□ 0.45
TRIM13-208ENST00000478111 SLC8A2Q9UPR5 921 aa17.88■□□□□ 0.45
TRIM13-208ENST00000478111 WNT6Q9Y6F9 365 aa17.88■□□□□ 0.45
TRIM13-208ENST00000478111 AXIN1O15169 862 aa17.87■□□□□ 0.45
TRIM13-208ENST00000478111 RPP40O75818 363 aaKnown RBP17.87■□□□□ 0.45
TRIM13-208ENST00000478111 TNNC2P02585 160 aa17.87■□□□□ 0.45
TRIM13-208ENST00000478111 TCF3P15923 654 aa17.87■□□□□ 0.45
TRIM13-208ENST00000478111 BDNFP23560 247 aa17.87■□□□□ 0.45
TRIM13-208ENST00000478111 USP46P62068 366 aa17.87■□□□□ 0.45
TRIM13-208ENST00000478111 STK38Q15208 465 aa17.87■□□□□ 0.45
TRIM13-208ENST00000478111 CNNM4Q6P4Q7 775 aa17.87■□□□□ 0.45
TRIM13-208ENST00000478111 VSTM1Q6UX27 236 aa17.87■□□□□ 0.45
TRIM13-208ENST00000478111 C4orf50Q6ZRC1 276 aa17.87■□□□□ 0.45
TRIM13-208ENST00000478111 TRAPPC11Q7Z392 1133 aa17.87■□□□□ 0.45
TRIM13-208ENST00000478111 WDR49Q8IV35 697 aa17.87■□□□□ 0.45
TRIM13-208ENST00000478111 CPA6Q8N4T0 437 aa17.87■□□□□ 0.45
TRIM13-208ENST00000478111 CAMKK1Q8N5S9 505 aa17.87■□□□□ 0.45
TRIM13-208ENST00000478111 SH3RF2Q8TEC5 729 aa17.87■□□□□ 0.45
TRIM13-208ENST00000478111 LOXL4Q96JB6 756 aa17.87■□□□□ 0.45
TRIM13-208ENST00000478111 GZF1Q9H116 711 aaPredicted RBP17.87■□□□□ 0.45
TRIM13-208ENST00000478111 ARRDC1-AS1Q9H2J1 176 aa17.87■□□□□ 0.45
TRIM13-208ENST00000478111 LINC00597Q9H2U6 94 aa17.87■□□□□ 0.45
TRIM13-208ENST00000478111 TFIP11Q9UBB9 837 aaKnown RBP17.87■□□□□ 0.45
TRIM13-208ENST00000478111 USP24Q9UPU5 2620 aa17.87■□□□□ 0.45
TRIM13-208ENST00000478111 NUP205Q92621 2012 aa17.86■□□□□ 0.45
TRIM13-208ENST00000478111 SPTLC2O15270 562 aa17.86■□□□□ 0.45
TRIM13-208ENST00000478111 EIF3DO15371 548 aaKnown RBP eCLIP17.86■□□□□ 0.45
TRIM13-208ENST00000478111 PPP6R2O75170 966 aa17.86■□□□□ 0.45
TRIM13-208ENST00000478111 EPN2O95208 641 aa17.86■□□□□ 0.45
TRIM13-208ENST00000478111 ADRB1P08588 477 aa17.86■□□□□ 0.45
TRIM13-208ENST00000478111 PDGFRBP09619 1106 aa17.86■□□□□ 0.45
TRIM13-208ENST00000478111 HDCP19113 662 aa17.86■□□□□ 0.45
TRIM13-208ENST00000478111 EHHADHQ08426 723 aa17.86■□□□□ 0.45
TRIM13-208ENST00000478111 SNRNP35Q16560 246 aaKnown RBP17.86■□□□□ 0.45
TRIM13-208ENST00000478111 FBXO43Q4G163 708 aa17.86■□□□□ 0.45
TRIM13-208ENST00000478111 SHC4Q6S5L8 630 aa17.86■□□□□ 0.45
TRIM13-208ENST00000478111 STXBP4Q6ZWJ1 553 aa17.86■□□□□ 0.45
TRIM13-208ENST00000478111 CACNA2D4Q7Z3S7 1137 aa17.86■□□□□ 0.45
TRIM13-208ENST00000478111 FSIP1Q8NA03 581 aa17.86■□□□□ 0.45
TRIM13-208ENST00000478111 MYCBPAPQ8TBZ2 947 aa17.86■□□□□ 0.45
TRIM13-208ENST00000478111 CD101Q93033 1021 aa17.86■□□□□ 0.45
TRIM13-208ENST00000478111 PCED1BQ96HM7 432 aa17.86■□□□□ 0.45
TRIM13-208ENST00000478111 ZC3H10Q96K80 434 aaKnown RBP17.86■□□□□ 0.45
TRIM13-208ENST00000478111 MRPL45Q9BRJ2 306 aaKnown RBP17.86■□□□□ 0.45
TRIM13-208ENST00000478111 LRRC27Q9C0I9 530 aa17.86■□□□□ 0.45
TRIM13-208ENST00000478111 CUEDC2Q9H467 287 aa17.86■□□□□ 0.45
TRIM13-208ENST00000478111 KIAA1586Q9HCI6 787 aa17.86■□□□□ 0.45
TRIM13-208ENST00000478111 AGPAT3Q9NRZ7 376 aa17.86■□□□□ 0.45
TRIM13-208ENST00000478111 RXFP3Q9NSD7 469 aa17.86■□□□□ 0.45
TRIM13-208ENST00000478111 ARHGAP26Q9UNA1 814 aa17.86■□□□□ 0.45
TRIM13-208ENST00000478111 FOXD2O60548 495 aaPredicted RBP17.85■□□□□ 0.45
TRIM13-208ENST00000478111 AKAP3O75969 853 aa17.85■□□□□ 0.45
TRIM13-208ENST00000478111 ZNF806P0C7X5 589 aa17.85■□□□□ 0.45
TRIM13-208ENST00000478111 GRIK1P39086 918 aa17.85■□□□□ 0.45
TRIM13-208ENST00000478111 IFNAR2P48551 515 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms