RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 DGLUCYQ7Z3D6 616 aa2.17□□□□□ -2.06
CALD1-218ENST00000478075 SRGAP1Q7Z6B7 1085 aa2.17□□□□□ -2.06
CALD1-218ENST00000478075 COL23A1Q86Y22 540 aaPredicted RBP2.17□□□□□ -2.06
CALD1-218ENST00000478075 AOPEPQ8N6M6 819 aa2.17□□□□□ -2.06
CALD1-218ENST00000478075 MAP4K1Q92918 833 aa2.17□□□□□ -2.06
CALD1-218ENST00000478075 LRIG1Q96JA1 1093 aa2.17□□□□□ -2.06
CALD1-218ENST00000478075 TRIB1Q96RU8 372 aa2.17□□□□□ -2.06
CALD1-218ENST00000478075 RBM38Q9H0Z9 239 aaKnown RBP2.17□□□□□ -2.06
CALD1-218ENST00000478075 DECR2Q9NUI1 292 aa2.17□□□□□ -2.06
CALD1-218ENST00000478075 SPTLC3Q9NUV7 552 aa2.17□□□□□ -2.06
CALD1-218ENST00000478075 NCKIPSDQ9NZQ3 722 aa2.17□□□□□ -2.06
CALD1-218ENST00000478075 MAFFQ9ULX9 164 aa2.17□□□□□ -2.06
CALD1-218ENST00000478075 RUVBL1Q9Y265 456 aaKnown RBP2.17□□□□□ -2.06
CALD1-218ENST00000478075 TJP3O95049 919 aa2.16□□□□□ -2.06
CALD1-218ENST00000478075 IL6RP08887 468 aaPredicted RBP2.16□□□□□ -2.06
CALD1-218ENST00000478075 TCF3P15923 654 aa2.16□□□□□ -2.06
CALD1-218ENST00000478075 CD6P30203 668 aa2.16□□□□□ -2.06
CALD1-218ENST00000478075 SLC6A4P31645 630 aa2.16□□□□□ -2.06
CALD1-218ENST00000478075 SLC6A9P48067 706 aa2.16□□□□□ -2.06
CALD1-218ENST00000478075 PDE1AP54750 535 aa2.16□□□□□ -2.06
CALD1-218ENST00000478075 MRPS9P82933 396 aaKnown RBP2.16□□□□□ -2.06
CALD1-218ENST00000478075 CPEB4Q17RY0 729 aaKnown RBP eCLIP2.16□□□□□ -2.06
CALD1-218ENST00000478075 ANO4Q32M45 955 aa2.16□□□□□ -2.06
CALD1-218ENST00000478075 FAM76BQ5HYJ3 339 aa2.16□□□□□ -2.06
CALD1-218ENST00000478075 UTP14CQ5TAP6 766 aaKnown RBP2.16□□□□□ -2.06
CALD1-218ENST00000478075 DSTYKQ6XUX3 929 aa2.16□□□□□ -2.06
CALD1-218ENST00000478075 POC1BQ8TC44 478 aa2.16□□□□□ -2.06
CALD1-218ENST00000478075 ZNF524Q96C55 264 aa2.16□□□□□ -2.06
CALD1-218ENST00000478075 RNPC3Q96LT9 517 aaKnown RBP2.16□□□□□ -2.06
CALD1-218ENST00000478075 KLHL32Q96NJ5 620 aa2.16□□□□□ -2.06
CALD1-218ENST00000478075 ACAP3Q96P50 834 aa2.16□□□□□ -2.06
CALD1-218ENST00000478075 GPR101Q96P66 508 aaPredicted RBP2.16□□□□□ -2.06
CALD1-218ENST00000478075 C11orf54Q9H0W9 315 aaPredicted RBP2.16□□□□□ -2.06
CALD1-218ENST00000478075 CDT1Q9H211 546 aa2.16□□□□□ -2.06
CALD1-218ENST00000478075 SCN5AQ14524 2016 aa2.16□□□□□ -2.06
CALD1-218ENST00000478075 SRRM3A6NNA2 597 aaPredicted RBP2.15□□□□□ -2.07
CALD1-218ENST00000478075 NEMP1O14524 444 aa2.15□□□□□ -2.07
CALD1-218ENST00000478075 KPNA6O60684 536 aa2.15□□□□□ -2.07
CALD1-218ENST00000478075 AMY1AP04745 511 aa2.15□□□□□ -2.07
CALD1-218ENST00000478075 MTHFD1P11586 935 aaKnown RBP2.15□□□□□ -2.07
CALD1-218ENST00000478075 ITGALP20701 1170 aa2.15□□□□□ -2.07
CALD1-218ENST00000478075 DDCP20711 480 aa2.15□□□□□ -2.07
CALD1-218ENST00000478075 RENBPP51606 427 aa2.15□□□□□ -2.07
CALD1-218ENST00000478075 CTXN1P60606 82 aa2.15□□□□□ -2.07
CALD1-218ENST00000478075 HSF1Q00613 529 aa2.15□□□□□ -2.07
CALD1-218ENST00000478075 MGAT2Q10469 447 aa2.15□□□□□ -2.07
CALD1-218ENST00000478075 SART3Q15020 963 aaKnown RBP2.15□□□□□ -2.07
CALD1-218ENST00000478075 ZNF718Q3SXZ3 478 aa2.15□□□□□ -2.07
CALD1-218ENST00000478075 BROXQ5VW32 411 aa2.15□□□□□ -2.07
CALD1-218ENST00000478075 C11orf74Q86VG3 221 aa2.15□□□□□ -2.07
CALD1-218ENST00000478075 SLC15A3Q8IY34 581 aa2.15□□□□□ -2.07
CALD1-218ENST00000478075 DDX55Q8NHQ9 600 aaKnown RBP eCLIP2.15□□□□□ -2.07
CALD1-218ENST00000478075 TSPEARQ8WU66 669 aa2.15□□□□□ -2.07
CALD1-218ENST00000478075 AUTS2Q8WXX7 1259 aa2.15□□□□□ -2.07
CALD1-218ENST00000478075 MKL1Q969V6 931 aa2.15□□□□□ -2.07
CALD1-218ENST00000478075 PHF21BQ96EK2 531 aa2.15□□□□□ -2.07
CALD1-218ENST00000478075 PYGO2Q9BRQ0 406 aa2.15□□□□□ -2.07
CALD1-218ENST00000478075 DCTN5Q9BTE1 182 aa2.15□□□□□ -2.07
CALD1-218ENST00000478075 SEZ6LQ9BYH1 1024 aa2.15□□□□□ -2.07
CALD1-218ENST00000478075 MANSC1Q9H8J5 431 aa2.15□□□□□ -2.07
CALD1-218ENST00000478075 TCF7L2Q9NQB0 619 aa2.15□□□□□ -2.07
CALD1-218ENST00000478075 EDARQ9UNE0 448 aa2.15□□□□□ -2.07
CALD1-218ENST00000478075 EVPLQ92817 2033 aa2.15□□□□□ -2.07
CALD1-218ENST00000478075 SMTNL1A8MU46 457 aa2.14□□□□□ -2.07
CALD1-218ENST00000478075 FAM171A2A8MVW0 826 aa2.14□□□□□ -2.07
CALD1-218ENST00000478075 GCATO75600 419 aa2.14□□□□□ -2.07
CALD1-218ENST00000478075 ENPP1P22413 925 aa2.14□□□□□ -2.07
CALD1-218ENST00000478075 NEK4P51957 841 aa2.14□□□□□ -2.07
CALD1-218ENST00000478075 ZNF672Q499Z4 452 aaPredicted RBP2.14□□□□□ -2.07
CALD1-218ENST00000478075 NAALADL2Q58DX5 795 aa2.14□□□□□ -2.07
CALD1-218ENST00000478075 RBM20Q5T481 1227 aaKnown RBP2.14□□□□□ -2.07
CALD1-218ENST00000478075 RFX8Q6ZV50 586 aa2.14□□□□□ -2.07
CALD1-218ENST00000478075 FAM109AQ8N4B1 249 aa2.14□□□□□ -2.07
CALD1-218ENST00000478075 WDSUB1Q8N9V3 476 aa2.14□□□□□ -2.07
CALD1-218ENST00000478075 NSUN7Q8NE18 718 aaKnown RBP2.14□□□□□ -2.07
CALD1-218ENST00000478075 JPH3Q8WXH2 748 aaPredicted RBP2.14□□□□□ -2.07
CALD1-218ENST00000478075 SLC5A5Q92911 643 aa2.14□□□□□ -2.07
CALD1-218ENST00000478075 CCDC17Q96LX7 622 aa2.14□□□□□ -2.07
CALD1-218ENST00000478075 ADI1Q9BV57 179 aa2.14□□□□□ -2.07
CALD1-218ENST00000478075 IFT122Q9HBG6 1241 aa2.14□□□□□ -2.07
CALD1-218ENST00000478075 JKAMPQ9P055 326 aa2.14□□□□□ -2.07
CALD1-218ENST00000478075 SYT5O00445 386 aa2.13□□□□□ -2.07
CALD1-218ENST00000478075 ANXA1P04083 346 aa2.13□□□□□ -2.07
CALD1-218ENST00000478075 FGF2P09038 288 aa2.13□□□□□ -2.07
CALD1-218ENST00000478075 MTHFD2P13995 350 aa2.13□□□□□ -2.07
CALD1-218ENST00000478075 PHKG2P15735 406 aa2.13□□□□□ -2.07
CALD1-218ENST00000478075 ZNF10P21506 573 aaPredicted RBP2.13□□□□□ -2.07
CALD1-218ENST00000478075 TPTEP56180 551 aa2.13□□□□□ -2.07
CALD1-218ENST00000478075 SEPT2Q15019 361 aa2.13□□□□□ -2.07
CALD1-218ENST00000478075 MUM1Q2TAK8 710 aa2.13□□□□□ -2.07
CALD1-218ENST00000478075 PABPC1LQ4VXU2 614 aaKnown RBP2.13□□□□□ -2.07
CALD1-218ENST00000478075 TREML2Q5T2D2 321 aa2.13□□□□□ -2.07
CALD1-218ENST00000478075 WBP2NLQ6ICG8 309 aa2.13□□□□□ -2.07
CALD1-218ENST00000478075 LIX1LQ8IVB5 337 aa2.13□□□□□ -2.07
CALD1-218ENST00000478075 MUC20Q8N307 709 aaPredicted RBP2.13□□□□□ -2.07
CALD1-218ENST00000478075 ZGPATQ8N5A5 531 aaKnown RBP2.13□□□□□ -2.07
CALD1-218ENST00000478075 IL17RDQ8NFM7 739 aa2.13□□□□□ -2.07
CALD1-218ENST00000478075 CCHCR1Q8TD31 782 aa2.13□□□□□ -2.07
CALD1-218ENST00000478075 SRPK1Q96SB4 655 aaKnown RBP2.13□□□□□ -2.07
CALD1-218ENST00000478075 ACE2Q9BYF1 805 aaPredicted RBP2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms