RNA–Protein interactions for RNA: ENST00000478048.5

CBWD3-206, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-206ENST00000478048 RFX1P22670 979 aa12.18□□□□□ -0.46
CBWD3-206ENST00000478048 USP8P40818 1118 aa12.18□□□□□ -0.46
CBWD3-206ENST00000478048 YWHAEP62258 255 aaKnown RBP12.18□□□□□ -0.46
CBWD3-206ENST00000478048 CCDC85BQ15834 202 aaPredicted RBP12.18□□□□□ -0.46
CBWD3-206ENST00000478048 DCP1BQ8IZD4 617 aaKnown RBP12.18□□□□□ -0.46
CBWD3-206ENST00000478048 FEZF2Q8TBJ5 459 aa12.18□□□□□ -0.46
CBWD3-206ENST00000478048 PPP2R3CQ969Q6 453 aa12.18□□□□□ -0.46
CBWD3-206ENST00000478048 MYLPFQ96A32 169 aa12.18□□□□□ -0.46
CBWD3-206ENST00000478048 JAKMIP2Q96AA8 810 aa12.18□□□□□ -0.46
CBWD3-206ENST00000478048 PCED1BQ96HM7 432 aa12.18□□□□□ -0.46
CBWD3-206ENST00000478048 TNIP3Q96KP6 325 aa12.18□□□□□ -0.46
CBWD3-206ENST00000478048 FAM81BQ96LP2 452 aa12.18□□□□□ -0.46
CBWD3-206ENST00000478048 HEXIM2Q96MH2 286 aaKnown RBP12.18□□□□□ -0.46
CBWD3-206ENST00000478048 TTYH3Q9C0H2 523 aa12.18□□□□□ -0.46
CBWD3-206ENST00000478048 FAM124BQ9H5Z6 455 aaPredicted RBP12.18□□□□□ -0.46
CBWD3-206ENST00000478048 ABI2Q9NYB9 513 aaPredicted RBP12.18□□□□□ -0.46
CBWD3-206ENST00000478048 AFF4Q9UHB7 1163 aaKnown RBP12.18□□□□□ -0.46
CBWD3-206ENST00000478048 SLC27A5Q9Y2P5 690 aa12.18□□□□□ -0.46
CBWD3-206ENST00000478048 DOCK6Q96HP0 2047 aa12.17□□□□□ -0.46
CBWD3-206ENST00000478048 FSD2A1L4K1 749 aa12.17□□□□□ -0.46
CBWD3-206ENST00000478048 F8VZ95 297 aa12.17□□□□□ -0.46
CBWD3-206ENST00000478048 SOAT2O75908 522 aa12.17□□□□□ -0.46
CBWD3-206ENST00000478048 TPM3P06753 285 aa12.17□□□□□ -0.46
CBWD3-206ENST00000478048 CCDC130P13994 396 aa12.17□□□□□ -0.46
CBWD3-206ENST00000478048 ATF2P15336 505 aa12.17□□□□□ -0.46
CBWD3-206ENST00000478048 CLCN1P35523 988 aa12.17□□□□□ -0.46
CBWD3-206ENST00000478048 ZNF75DP51815 510 aa12.17□□□□□ -0.46
CBWD3-206ENST00000478048 ZNF132P52740 706 aa12.17□□□□□ -0.46
CBWD3-206ENST00000478048 JAM2P57087 298 aa12.17□□□□□ -0.46
CBWD3-206ENST00000478048 CYP27A1Q02318 531 aa12.17□□□□□ -0.46
CBWD3-206ENST00000478048 DUSP4Q13115 394 aa12.17□□□□□ -0.46
CBWD3-206ENST00000478048 PPP1R26Q5T8A7 1209 aaPredicted RBP12.17□□□□□ -0.46
CBWD3-206ENST00000478048 PAQR9Q6ZVX9 377 aa12.17□□□□□ -0.46
CBWD3-206ENST00000478048 VSTM4Q8IW00 320 aa12.17□□□□□ -0.46
CBWD3-206ENST00000478048 TTC39CQ8N584 583 aa12.17□□□□□ -0.46
CBWD3-206ENST00000478048 KREMEN2Q8NCW0 462 aa12.17□□□□□ -0.46
CBWD3-206ENST00000478048 MYCBPAPQ8TBZ2 947 aa12.17□□□□□ -0.46
CBWD3-206ENST00000478048 PPM1EQ8WY54 764 aa12.17□□□□□ -0.46
CBWD3-206ENST00000478048 TFAP2BQ92481 460 aa12.17□□□□□ -0.46
CBWD3-206ENST00000478048 BAP1Q92560 729 aa12.17□□□□□ -0.46
CBWD3-206ENST00000478048 CDCA3Q99618 268 aaPredicted RBP12.17□□□□□ -0.46
CBWD3-206ENST00000478048 ZSWIM1Q9BR11 485 aa12.17□□□□□ -0.46
CBWD3-206ENST00000478048 B3GNT5Q9BYG0 378 aa12.17□□□□□ -0.46
CBWD3-206ENST00000478048 CYP4F11Q9HBI6 524 aa12.17□□□□□ -0.46
CBWD3-206ENST00000478048 TMEM30AQ9NV96 361 aa12.17□□□□□ -0.46
CBWD3-206ENST00000478048 CEP72Q9P209 647 aa12.17□□□□□ -0.46
CBWD3-206ENST00000478048 FBXW11Q9UKB1 542 aa12.17□□□□□ -0.46
CBWD3-206ENST00000478048 PRUNE2Q8WUY3 3088 aa12.17□□□□□ -0.46
CBWD3-206ENST00000478048 CYP26A1O43174 497 aa12.17□□□□□ -0.46
CBWD3-206ENST00000478048 GYPCP04921 128 aa12.17□□□□□ -0.46
CBWD3-206ENST00000478048 CYP2F1P24903 491 aa12.17□□□□□ -0.46
CBWD3-206ENST00000478048 SSTR3P32745 418 aaPredicted RBP12.17□□□□□ -0.46
CBWD3-206ENST00000478048 PKDCCQ504Y2 493 aa12.17□□□□□ -0.46
CBWD3-206ENST00000478048 TPGS2Q68CL5 300 aa12.17□□□□□ -0.46
CBWD3-206ENST00000478048 LIAT1Q6ZQX7 453 aa12.17□□□□□ -0.46
CBWD3-206ENST00000478048 CACNA2D4Q7Z3S7 1137 aa12.17□□□□□ -0.46
CBWD3-206ENST00000478048 PPFIBP1Q86W92 1011 aa12.17□□□□□ -0.46
CBWD3-206ENST00000478048 FAM71AQ8IYT1 594 aa12.17□□□□□ -0.46
CBWD3-206ENST00000478048 FUKQ8N0W3 1084 aa12.17□□□□□ -0.46
CBWD3-206ENST00000478048 EFHBQ8N7U6 833 aa12.17□□□□□ -0.46
CBWD3-206ENST00000478048 SLC2A14Q8TDB8 520 aa12.17□□□□□ -0.46
CBWD3-206ENST00000478048 CPLX3Q8WVH0 158 aa12.17□□□□□ -0.46
CBWD3-206ENST00000478048 CYFIP2Q96F07 1278 aa12.17□□□□□ -0.46
CBWD3-206ENST00000478048 SPAG5Q96R06 1193 aa12.17□□□□□ -0.46
CBWD3-206ENST00000478048 ZNF518BQ9C0D4 1074 aa12.17□□□□□ -0.46
CBWD3-206ENST00000478048 MAN1C1Q9NR34 630 aa12.17□□□□□ -0.46
CBWD3-206ENST00000478048 GFPT2O94808 682 aa12.16□□□□□ -0.46
CBWD3-206ENST00000478048 PAEPP09466 180 aa12.16□□□□□ -0.46
CBWD3-206ENST00000478048 CD19P15391 556 aa12.16□□□□□ -0.46
CBWD3-206ENST00000478048 BDNFP23560 247 aa12.16□□□□□ -0.46
CBWD3-206ENST00000478048 BRD2P25440 801 aaKnown RBP12.16□□□□□ -0.46
CBWD3-206ENST00000478048 ADORA2BP29275 332 aa12.16□□□□□ -0.46
CBWD3-206ENST00000478048 CACNA2D1P54289 1103 aa12.16□□□□□ -0.46
CBWD3-206ENST00000478048 DLX2Q07687 328 aaPredicted RBP12.16□□□□□ -0.46
CBWD3-206ENST00000478048 ADAM15Q13444 863 aa12.16□□□□□ -0.46
CBWD3-206ENST00000478048 MAPRE1Q15691 268 aaKnown RBP12.16□□□□□ -0.46
CBWD3-206ENST00000478048 NFE2Q16621 373 aaPredicted RBP12.16□□□□□ -0.46
CBWD3-206ENST00000478048 FIGNQ5HY92 759 aa12.16□□□□□ -0.46
CBWD3-206ENST00000478048 SPECC1LQ69YQ0 1117 aa12.16□□□□□ -0.46
CBWD3-206ENST00000478048 SLC47A2Q86VL8 602 aa12.16□□□□□ -0.46
CBWD3-206ENST00000478048 SPATA2LQ8IUW3 424 aaPredicted RBP12.16□□□□□ -0.46
CBWD3-206ENST00000478048 SPPL2BQ8TCT7 592 aa12.16□□□□□ -0.46
CBWD3-206ENST00000478048 GRPEL1Q9HAV7 217 aa12.16□□□□□ -0.46
CBWD3-206ENST00000478048 PCDHB5Q9Y5E4 795 aa12.16□□□□□ -0.46
CBWD3-206ENST00000478048 ITIH6Q6UXX5 1313 aa12.16□□□□□ -0.46
CBWD3-206ENST00000478048 XIRP2A4UGR9 3374 aa12.15□□□□□ -0.46
CBWD3-206ENST00000478048 GOLGA6L3A6NEY3 463 aa12.15□□□□□ -0.46
CBWD3-206ENST00000478048 LRRC53A6NM62 1247 aa12.15□□□□□ -0.46
CBWD3-206ENST00000478048 RFPL2O75678 378 aa12.15□□□□□ -0.46
CBWD3-206ENST00000478048 C8AP07357 584 aa12.15□□□□□ -0.46
CBWD3-206ENST00000478048 VDRP11473 427 aa12.15□□□□□ -0.46
CBWD3-206ENST00000478048 ELF1P32519 619 aa12.15□□□□□ -0.46
CBWD3-206ENST00000478048 SOX5P35711 763 aa12.15□□□□□ -0.46
CBWD3-206ENST00000478048 GPR15P49685 360 aa12.15□□□□□ -0.46
CBWD3-206ENST00000478048 SMARCB1Q12824 385 aa12.15□□□□□ -0.46
CBWD3-206ENST00000478048 CTC1Q2NKJ3 1217 aa12.15□□□□□ -0.46
CBWD3-206ENST00000478048 MGAT5BQ3V5L5 792 aa12.15□□□□□ -0.46
CBWD3-206ENST00000478048 CFAP221Q4G0U5 840 aa12.15□□□□□ -0.46
CBWD3-206ENST00000478048 SDHAF4Q5VUM1 108 aa12.15□□□□□ -0.46
CBWD3-206ENST00000478048 E4F1Q66K89 784 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms