RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 CD19P15391 556 aa12.84□□□□□ -0.35
PTPRF-212ENST00000477970 KDELR1P24390 212 aa12.84□□□□□ -0.35
PTPRF-212ENST00000477970 RAP1GAPP47736 663 aa12.84□□□□□ -0.35
PTPRF-212ENST00000477970 RNASEH2BQ5TBB1 312 aaKnown RBP12.84□□□□□ -0.35
PTPRF-212ENST00000477970 WDR78Q5VTH9 848 aa12.84□□□□□ -0.35
PTPRF-212ENST00000477970 IQSEC1Q6DN90 963 aa12.84□□□□□ -0.35
PTPRF-212ENST00000477970 GSTA5Q7RTV2 222 aa12.84□□□□□ -0.35
PTPRF-212ENST00000477970 TAX1BP1Q86VP1 789 aa12.84□□□□□ -0.35
PTPRF-212ENST00000477970 CFAP57Q96MR6 1250 aa12.84□□□□□ -0.35
PTPRF-212ENST00000477970 TWNKQ96RR1 684 aa12.84□□□□□ -0.35
PTPRF-212ENST00000477970 ADPGKQ9BRR6 497 aa12.84□□□□□ -0.35
PTPRF-212ENST00000477970 TUT1Q9H6E5 874 aaKnown RBP12.84□□□□□ -0.35
PTPRF-212ENST00000477970 TLDC2A0PJX2 215 aa12.84□□□□□ -0.35
PTPRF-212ENST00000477970 TRIM66O15016 1216 aa12.84□□□□□ -0.35
PTPRF-212ENST00000477970 TSHRP16473 764 aa12.84□□□□□ -0.35
PTPRF-212ENST00000477970 SLC18A1P54219 525 aa12.84□□□□□ -0.35
PTPRF-212ENST00000477970 ITIH4Q14624 930 aa12.84□□□□□ -0.35
PTPRF-212ENST00000477970 GRIK4Q16099 956 aa12.84□□□□□ -0.35
PTPRF-212ENST00000477970 GKAP1Q5VSY0 366 aaPredicted RBP12.84□□□□□ -0.35
PTPRF-212ENST00000477970 JOSD2Q8TAC2 188 aa12.84□□□□□ -0.35
PTPRF-212ENST00000477970 INTS9Q9NV88 658 aaKnown RBP12.84□□□□□ -0.35
PTPRF-212ENST00000477970 FARP1Q9Y4F1 1045 aaPredicted RBP12.84□□□□□ -0.35
PTPRF-212ENST00000477970 BTBD19C9JJ37 291 aa12.83□□□□□ -0.35
PTPRF-212ENST00000477970 PI4K2BG5E9Z4 385 aa12.83□□□□□ -0.35
PTPRF-212ENST00000477970 TRPA1O75762 1119 aa12.83□□□□□ -0.35
PTPRF-212ENST00000477970 ACSL3O95573 720 aa12.83□□□□□ -0.35
PTPRF-212ENST00000477970 ATF7P17544 494 aaPredicted RBP12.83□□□□□ -0.35
PTPRF-212ENST00000477970 MKRN3Q13064 507 aaKnown RBP12.83□□□□□ -0.35
PTPRF-212ENST00000477970 TRIP13Q15645 432 aaPredicted RBP12.83□□□□□ -0.35
PTPRF-212ENST00000477970 TXNRD3NBQ6F5E7 133 aa12.83□□□□□ -0.35
PTPRF-212ENST00000477970 PIGWQ7Z7B1 504 aa12.83□□□□□ -0.35
PTPRF-212ENST00000477970 C10orf67Q8IYJ2 551 aa12.83□□□□□ -0.35
PTPRF-212ENST00000477970 SEC16BQ96JE7 1060 aa12.83□□□□□ -0.35
PTPRF-212ENST00000477970 NCAPGQ9BPX3 1015 aa12.83□□□□□ -0.35
PTPRF-212ENST00000477970 UBN1Q9NPG3 1134 aa12.83□□□□□ -0.35
PTPRF-212ENST00000477970 ASNSD1Q9NWL6 643 aa12.83□□□□□ -0.35
PTPRF-212ENST00000477970 DPP3Q9NY33 737 aa12.83□□□□□ -0.35
PTPRF-212ENST00000477970 ZNF148Q9UQR1 794 aa12.83□□□□□ -0.35
PTPRF-212ENST00000477970 LRRD1A4D1F6 860 aa12.83□□□□□ -0.36
PTPRF-212ENST00000477970 ZNF487B1APH4 448 aa12.83□□□□□ -0.36
PTPRF-212ENST00000477970 GJC1P36383 396 aa12.83□□□□□ -0.36
PTPRF-212ENST00000477970 MAGEA4P43358 317 aa12.83□□□□□ -0.36
PTPRF-212ENST00000477970 ZNF143P52747 638 aaPredicted RBP12.83□□□□□ -0.36
PTPRF-212ENST00000477970 IGBP1P78318 339 aa12.83□□□□□ -0.36
PTPRF-212ENST00000477970 KYNUQ16719 465 aa12.83□□□□□ -0.36
PTPRF-212ENST00000477970 LACTB2Q53H82 288 aaPredicted RBP12.83□□□□□ -0.36
PTPRF-212ENST00000477970 KIAA0319LQ8IZA0 1049 aa12.83□□□□□ -0.36
PTPRF-212ENST00000477970 CACNA2D3Q8IZS8 1091 aa12.83□□□□□ -0.36
PTPRF-212ENST00000477970 MAML3Q96JK9 1138 aa12.83□□□□□ -0.36
PTPRF-212ENST00000477970 RBM15Q96T37 977 aaKnown RBP eCLIP12.83□□□□□ -0.36
PTPRF-212ENST00000477970 ABHD16BQ9H3Z7 469 aa12.83□□□□□ -0.36
PTPRF-212ENST00000477970 ZFYVE28Q9HCC9 887 aa12.83□□□□□ -0.36
PTPRF-212ENST00000477970 ALOX15BO15296 676 aa12.83□□□□□ -0.36
PTPRF-212ENST00000477970 ADCYAP1R1P41586 468 aa12.83□□□□□ -0.36
PTPRF-212ENST00000477970 ARSEP51690 589 aa12.83□□□□□ -0.36
PTPRF-212ENST00000477970 CDH8P55286 799 aa12.83□□□□□ -0.36
PTPRF-212ENST00000477970 LLGL1Q15334 1064 aa12.83□□□□□ -0.36
PTPRF-212ENST00000477970 DGKDQ16760 1214 aa12.83□□□□□ -0.36
PTPRF-212ENST00000477970 LONRF1Q17RB8 773 aa12.83□□□□□ -0.36
PTPRF-212ENST00000477970 LRRC52Q8N7C0 313 aa12.83□□□□□ -0.36
PTPRF-212ENST00000477970 MDM1Q8TC05 714 aa12.83□□□□□ -0.36
PTPRF-212ENST00000477970 ARHGEF2Q92974 986 aaKnown RBP12.83□□□□□ -0.36
PTPRF-212ENST00000477970 ZBTB10Q96DT7 871 aa12.83□□□□□ -0.36
PTPRF-212ENST00000477970 CPB2Q96IY4 423 aa12.83□□□□□ -0.36
PTPRF-212ENST00000477970 SELENOSQ9BQE4 189 aa12.83□□□□□ -0.36
PTPRF-212ENST00000477970 ADAMTS10Q9H324 1103 aa12.83□□□□□ -0.36
PTPRF-212ENST00000477970 RABEP2Q9H5N1 569 aa12.83□□□□□ -0.36
PTPRF-212ENST00000477970 ACTR5Q9H9F9 607 aaPredicted RBP12.83□□□□□ -0.36
PTPRF-212ENST00000477970 METTL5Q9NRN9 209 aaKnown RBP12.83□□□□□ -0.36
PTPRF-212ENST00000477970 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.82□□□□□ -0.36
PTPRF-212ENST00000477970 TRUB2O95900 331 aaKnown RBP12.82□□□□□ -0.36
PTPRF-212ENST00000477970 IL1R2P27930 398 aa12.82□□□□□ -0.36
PTPRF-212ENST00000477970 MYO1EQ12965 1108 aa12.82□□□□□ -0.36
PTPRF-212ENST00000477970 ZBTB6Q15916 424 aa12.82□□□□□ -0.36
PTPRF-212ENST00000477970 QPCTQ16769 361 aa12.82□□□□□ -0.36
PTPRF-212ENST00000477970 PKDCCQ504Y2 493 aa12.82□□□□□ -0.36
PTPRF-212ENST00000477970 VSTM1Q6UX27 236 aa12.82□□□□□ -0.36
PTPRF-212ENST00000477970 GPR142Q7Z601 462 aa12.82□□□□□ -0.36
PTPRF-212ENST00000477970 CDR2LQ86X02 465 aaPredicted RBP12.82□□□□□ -0.36
PTPRF-212ENST00000477970 OTUD6BQ8N6M0 293 aa12.82□□□□□ -0.36
PTPRF-212ENST00000477970 STK32AQ8WU08 396 aa12.82□□□□□ -0.36
PTPRF-212ENST00000477970 NLRP7Q8WX94 980 aa12.82□□□□□ -0.36
PTPRF-212ENST00000477970 KLHL11Q9NVR0 708 aa12.82□□□□□ -0.36
PTPRF-212ENST00000477970 HMGXB4Q9UGU5 601 aa12.82□□□□□ -0.36
PTPRF-212ENST00000477970 AGAP1Q9UPQ3 857 aa12.82□□□□□ -0.36
PTPRF-212ENST00000477970 APOC4-APOC2K7ER74 178 aa12.82□□□□□ -0.36
PTPRF-212ENST00000477970 APOC2P02655 101 aa12.82□□□□□ -0.36
PTPRF-212ENST00000477970 VTNP04004 478 aa12.82□□□□□ -0.36
PTPRF-212ENST00000477970 ZNF286BP0CG31 522 aa12.82□□□□□ -0.36
PTPRF-212ENST00000477970 GHRP10912 638 aa12.82□□□□□ -0.36
PTPRF-212ENST00000477970 SMPD1P17405 629 aa12.82□□□□□ -0.36
PTPRF-212ENST00000477970 KAZNQ674X7 775 aa12.82□□□□□ -0.36
PTPRF-212ENST00000477970 ZDHHC17Q8IUH5 632 aa12.82□□□□□ -0.36
PTPRF-212ENST00000477970 PRCCQ92733 491 aaPredicted RBP12.82□□□□□ -0.36
PTPRF-212ENST00000477970 CNPY3Q9BT09 278 aa12.82□□□□□ -0.36
PTPRF-212ENST00000477970 NT5C1AQ9BXI3 368 aa12.82□□□□□ -0.36
PTPRF-212ENST00000477970 NSRP1Q9H0G5 558 aaKnown RBP12.82□□□□□ -0.36
PTPRF-212ENST00000477970 RSAD1Q9HA92 442 aa12.82□□□□□ -0.36
PTPRF-212ENST00000477970 M0QYV0 167 aa12.82□□□□□ -0.36
PTPRF-212ENST00000477970 AXLP30530 894 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms