RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 XRCC6P12956 609 aaKnown RBP eCLIP10.5□□□□□ -0.73
SMARCB1-206ENST00000477836 HLA-EP13747 358 aa10.5□□□□□ -0.73
SMARCB1-206ENST00000477836 FAM160A1Q05DH4 1040 aa10.5□□□□□ -0.73
SMARCB1-206ENST00000477836 GRIK2Q13002 908 aa10.5□□□□□ -0.73
SMARCB1-206ENST00000477836 ZNF77Q15935 545 aa10.5□□□□□ -0.73
SMARCB1-206ENST00000477836 TAF1BQ53T94 588 aaPredicted RBP10.5□□□□□ -0.73
SMARCB1-206ENST00000477836 EOGTQ5NDL2 527 aa10.5□□□□□ -0.73
SMARCB1-206ENST00000477836 EMC10Q5UCC4 262 aa10.5□□□□□ -0.73
SMARCB1-206ENST00000477836 FOXD4L5Q5VV16 416 aaPredicted RBP10.5□□□□□ -0.73
SMARCB1-206ENST00000477836 MON1AQ86VX9 555 aa10.5□□□□□ -0.73
SMARCB1-206ENST00000477836 SFTPA1Q8IWL2 248 aa10.5□□□□□ -0.73
SMARCB1-206ENST00000477836 TRIML1Q8N9V2 468 aa10.5□□□□□ -0.73
SMARCB1-206ENST00000477836 FOXD4L4Q8WXT5 416 aaPredicted RBP10.5□□□□□ -0.73
SMARCB1-206ENST00000477836 LINC00597Q9H2U6 94 aa10.5□□□□□ -0.73
SMARCB1-206ENST00000477836 FAM124BQ9H5Z6 455 aaPredicted RBP10.5□□□□□ -0.73
SMARCB1-206ENST00000477836 POLD4Q9HCU8 107 aa10.5□□□□□ -0.73
SMARCB1-206ENST00000477836 TRPC7Q9HCX4 862 aa10.5□□□□□ -0.73
SMARCB1-206ENST00000477836 PCDHA12Q9UN75 941 aa10.5□□□□□ -0.73
SMARCB1-206ENST00000477836 MAGED2Q9UNF1 606 aaPredicted RBP10.5□□□□□ -0.73
SMARCB1-206ENST00000477836 GOLGA4Q13439 2230 aaKnown RBP10.5□□□□□ -0.73
SMARCB1-206ENST00000477836 OBSL1O75147 1896 aa10.49□□□□□ -0.73
SMARCB1-206ENST00000477836 K7ERI5 159 aa10.49□□□□□ -0.73
SMARCB1-206ENST00000477836 PLK4O00444 970 aa10.49□□□□□ -0.73
SMARCB1-206ENST00000477836 TLX3O43711 291 aaPredicted RBP10.49□□□□□ -0.73
SMARCB1-206ENST00000477836 DKK1O94907 266 aa10.49□□□□□ -0.73
SMARCB1-206ENST00000477836 WISP1O95388 367 aa10.49□□□□□ -0.73
SMARCB1-206ENST00000477836 NFATC1O95644 943 aa10.49□□□□□ -0.73
SMARCB1-206ENST00000477836 F13A1P00488 732 aa10.49□□□□□ -0.73
SMARCB1-206ENST00000477836 GNSP15586 552 aa10.49□□□□□ -0.73
SMARCB1-206ENST00000477836 GUCY1B3Q02153 619 aa10.49□□□□□ -0.73
SMARCB1-206ENST00000477836 SEMG2Q02383 582 aa10.49□□□□□ -0.73
SMARCB1-206ENST00000477836 PPP2R5AQ15172 486 aa10.49□□□□□ -0.73
SMARCB1-206ENST00000477836 CCDC157Q569K6 752 aa10.49□□□□□ -0.73
SMARCB1-206ENST00000477836 GALNT17Q6IS24 598 aa10.49□□□□□ -0.73
SMARCB1-206ENST00000477836 STKLD1Q8NE28 680 aa10.49□□□□□ -0.73
SMARCB1-206ENST00000477836 OR10T2Q8NGX3 314 aa10.49□□□□□ -0.73
SMARCB1-206ENST00000477836 RHBDD1Q8TEB9 315 aa10.49□□□□□ -0.73
SMARCB1-206ENST00000477836 IFT74Q96LB3 600 aa10.49□□□□□ -0.73
SMARCB1-206ENST00000477836 AIFM3Q96NN9 605 aa10.49□□□□□ -0.73
SMARCB1-206ENST00000477836 GBP4Q96PP9 640 aa10.49□□□□□ -0.73
SMARCB1-206ENST00000477836 CYP2S1Q96SQ9 504 aa10.49□□□□□ -0.73
SMARCB1-206ENST00000477836 NAP1L4Q99733 375 aaKnown RBP10.49□□□□□ -0.73
SMARCB1-206ENST00000477836 ACO2Q99798 780 aaKnown RBP10.49□□□□□ -0.73
SMARCB1-206ENST00000477836 TCHPQ9BT92 498 aa10.49□□□□□ -0.73
SMARCB1-206ENST00000477836 ZDHHC5Q9C0B5 715 aa10.49□□□□□ -0.73
SMARCB1-206ENST00000477836 IL21RQ9HBE5 538 aa10.49□□□□□ -0.73
SMARCB1-206ENST00000477836 PTPRHQ9HD43 1115 aa10.49□□□□□ -0.73
SMARCB1-206ENST00000477836 SUSD2Q9UGT4 822 aa10.49□□□□□ -0.73
SMARCB1-206ENST00000477836 KCNJ14Q9UNX9 436 aa10.49□□□□□ -0.73
SMARCB1-206ENST00000477836 ZDHHC9Q9Y397 364 aa10.49□□□□□ -0.73
SMARCB1-206ENST00000477836 ATP6V1DQ9Y5K8 247 aa10.49□□□□□ -0.73
SMARCB1-206ENST00000477836 IGHV1OR15-9A0A0B4J2B8 117 aa10.48□□□□□ -0.73
SMARCB1-206ENST00000477836 E9PAM4 449 aa10.48□□□□□ -0.73
SMARCB1-206ENST00000477836 ERVH48-1M5A8F1 160 aa10.48□□□□□ -0.73
SMARCB1-206ENST00000477836 ADAM23O75077 832 aa10.48□□□□□ -0.73
SMARCB1-206ENST00000477836 CKMP06732 381 aa10.48□□□□□ -0.73
SMARCB1-206ENST00000477836 MCF2P10911 925 aa10.48□□□□□ -0.73
SMARCB1-206ENST00000477836 HMGA1P17096 107 aaKnown RBP10.48□□□□□ -0.73
SMARCB1-206ENST00000477836 TYMPP19971 482 aa10.48□□□□□ -0.73
SMARCB1-206ENST00000477836 MAOBP27338 520 aa10.48□□□□□ -0.73
SMARCB1-206ENST00000477836 SLC6A11P48066 632 aa10.48□□□□□ -0.73
SMARCB1-206ENST00000477836 AARSP49588 968 aaKnown RBP eCLIP10.48□□□□□ -0.73
SMARCB1-206ENST00000477836 CXADRP78310 365 aa10.48□□□□□ -0.73
SMARCB1-206ENST00000477836 SPAG1Q07617 926 aa10.48□□□□□ -0.73
SMARCB1-206ENST00000477836 USP4Q13107 963 aa10.48□□□□□ -0.73
SMARCB1-206ENST00000477836 GNL2Q13823 731 aaKnown RBP10.48□□□□□ -0.73
SMARCB1-206ENST00000477836 SAFBQ15424 915 aaKnown RBP eCLIP10.48□□□□□ -0.73
SMARCB1-206ENST00000477836 SMAD1Q15797 465 aaKnown RBP10.48□□□□□ -0.73
SMARCB1-206ENST00000477836 HSF5Q4G112 596 aaPredicted RBP10.48□□□□□ -0.73
SMARCB1-206ENST00000477836 SEZ6Q53EL9 994 aa10.48□□□□□ -0.73
SMARCB1-206ENST00000477836 MCTP1Q6DN14 999 aa10.48□□□□□ -0.73
SMARCB1-206ENST00000477836 PADI6Q6TGC4 694 aa10.48□□□□□ -0.73
SMARCB1-206ENST00000477836 PIK3AP1Q6ZUJ8 805 aa10.48□□□□□ -0.73
SMARCB1-206ENST00000477836 FBXO18Q8NFZ0 1043 aa10.48□□□□□ -0.73
SMARCB1-206ENST00000477836 BAHD1Q8TBE0 780 aaPredicted RBP10.48□□□□□ -0.73
SMARCB1-206ENST00000477836 NXPE2Q96DL1 559 aa10.48□□□□□ -0.73
SMARCB1-206ENST00000477836 SLC22A12Q96S37 553 aa10.48□□□□□ -0.73
SMARCB1-206ENST00000477836 CDC6Q99741 560 aa10.48□□□□□ -0.73
SMARCB1-206ENST00000477836 PI4K2AQ9BTU6 479 aa10.48□□□□□ -0.73
SMARCB1-206ENST00000477836 GAREM1Q9H706 876 aa10.48□□□□□ -0.73
SMARCB1-206ENST00000477836 TTC12Q9H892 705 aaPredicted RBP10.48□□□□□ -0.73
SMARCB1-206ENST00000477836 BRMS1Q9HCU9 246 aa10.48□□□□□ -0.73
SMARCB1-206ENST00000477836 TM7SF3Q9NS93 570 aa10.48□□□□□ -0.73
SMARCB1-206ENST00000477836 CALCOCO1Q9P1Z2 691 aa10.48□□□□□ -0.73
SMARCB1-206ENST00000477836 USP9XQ93008 2570 aaPredicted RBP10.47□□□□□ -0.73
SMARCB1-206ENST00000477836 MYMKA6NI61 221 aa10.47□□□□□ -0.73
SMARCB1-206ENST00000477836 B8ZZF3 427 aa10.47□□□□□ -0.73
SMARCB1-206ENST00000477836 APODP05090 189 aa10.47□□□□□ -0.73
SMARCB1-206ENST00000477836 USP17L7P0C7H9 530 aa10.47□□□□□ -0.73
SMARCB1-206ENST00000477836 HAPLN1P10915 354 aaPredicted RBP10.47□□□□□ -0.73
SMARCB1-206ENST00000477836 ODC1P11926 461 aa10.47□□□□□ -0.73
SMARCB1-206ENST00000477836 GABRG2P18507 467 aa10.47□□□□□ -0.73
SMARCB1-206ENST00000477836 CYP11B2P19099 503 aa10.47□□□□□ -0.73
SMARCB1-206ENST00000477836 LRPAP1P30533 357 aa10.47□□□□□ -0.73
SMARCB1-206ENST00000477836 TXKP42681 527 aa10.47□□□□□ -0.73
SMARCB1-206ENST00000477836 KIR2DL1P43626 348 aaPredicted RBP10.47□□□□□ -0.73
SMARCB1-206ENST00000477836 MESP2Q0VG99 397 aa10.47□□□□□ -0.73
SMARCB1-206ENST00000477836 RESTQ13127 1097 aa10.47□□□□□ -0.73
SMARCB1-206ENST00000477836 GAB4Q2WGN9 574 aa10.47□□□□□ -0.73
SMARCB1-206ENST00000477836 SLC10A6Q3KNW5 377 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms