RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 FAM9AQ8IZU1 332 aaPredicted RBP5.56□□□□□ -1.52
SMNDC1-205ENST00000477763 SPSB4Q96A44 273 aa5.56□□□□□ -1.52
SMNDC1-205ENST00000477763 MRPS18AQ9NVS2 196 aaKnown RBP5.56□□□□□ -1.52
SMNDC1-205ENST00000477763 HESX1Q9UBX0 185 aa5.56□□□□□ -1.52
SMNDC1-205ENST00000477763 SHOC2Q9UQ13 582 aa5.56□□□□□ -1.52
SMNDC1-205ENST00000477763 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.56□□□□□ -1.52
SMNDC1-205ENST00000477763 CEP83Q9Y592 693 aa5.56□□□□□ -1.52
SMNDC1-205ENST00000477763 A0A0B4J269 797 aa5.55□□□□□ -1.52
SMNDC1-205ENST00000477763 TRIAP1O43715 76 aa5.55□□□□□ -1.52
SMNDC1-205ENST00000477763 EIF3JO75822 258 aaKnown RBP5.55□□□□□ -1.52
SMNDC1-205ENST00000477763 INMTO95050 263 aa5.55□□□□□ -1.52
SMNDC1-205ENST00000477763 ATXN1LP0C7T5 689 aaKnown RBP5.55□□□□□ -1.52
SMNDC1-205ENST00000477763 ITGALP20701 1170 aa5.55□□□□□ -1.52
SMNDC1-205ENST00000477763 NDUFV1P49821 464 aa5.55□□□□□ -1.52
SMNDC1-205ENST00000477763 COL10A1Q03692 680 aa5.55□□□□□ -1.52
SMNDC1-205ENST00000477763 FSTL1Q12841 308 aa5.55□□□□□ -1.52
SMNDC1-205ENST00000477763 TUBB3Q13509 450 aa5.55□□□□□ -1.52
SMNDC1-205ENST00000477763 SF3B3Q15393 1217 aaKnown RBP5.55□□□□□ -1.52
SMNDC1-205ENST00000477763 ARL13BQ3SXY8 428 aa5.55□□□□□ -1.52
SMNDC1-205ENST00000477763 C10orf62Q5T681 223 aaPredicted RBP5.55□□□□□ -1.52
SMNDC1-205ENST00000477763 DCAF12L1Q5VU92 463 aa5.55□□□□□ -1.52
SMNDC1-205ENST00000477763 KIAA0895LQ68EN5 471 aa5.55□□□□□ -1.52
SMNDC1-205ENST00000477763 HIBCHQ6NVY1 386 aaPredicted RBP5.55□□□□□ -1.52
SMNDC1-205ENST00000477763 XRRA1Q6P2D8 792 aa5.55□□□□□ -1.52
SMNDC1-205ENST00000477763 UNC13DQ70J99 1090 aa5.55□□□□□ -1.52
SMNDC1-205ENST00000477763 SLC44A3Q8N4M1 653 aa5.55□□□□□ -1.52
SMNDC1-205ENST00000477763 RNF152Q8N8N0 203 aa5.55□□□□□ -1.52
SMNDC1-205ENST00000477763 OR56A3Q8NH54 315 aa5.55□□□□□ -1.52
SMNDC1-205ENST00000477763 SLC46A1Q96NT5 459 aa5.55□□□□□ -1.52
SMNDC1-205ENST00000477763 AGAP2Q99490 1192 aa5.55□□□□□ -1.52
SMNDC1-205ENST00000477763 KRTAP9-8Q9BYQ0 159 aa5.55□□□□□ -1.52
SMNDC1-205ENST00000477763 MYH16Q9H6N6 1097 aa5.55□□□□□ -1.52
SMNDC1-205ENST00000477763 HDAC9Q9UKV0 1011 aa5.55□□□□□ -1.52
SMNDC1-205ENST00000477763 LRCH1Q9Y2L9 728 aa5.55□□□□□ -1.52
SMNDC1-205ENST00000477763 LOC102723971A0A1B0GUV8 181 aa5.54□□□□□ -1.52
SMNDC1-205ENST00000477763 ABHD14A-ACY1A0A1B0GW23 586 aa5.54□□□□□ -1.52
SMNDC1-205ENST00000477763 PLEKHD1A6NEE1 506 aa5.54□□□□□ -1.52
SMNDC1-205ENST00000477763 TMEM233B4DJY2 109 aa5.54□□□□□ -1.52
SMNDC1-205ENST00000477763 OVOL3O00110 214 aa5.54□□□□□ -1.52
SMNDC1-205ENST00000477763 NCK2O43639 380 aa5.54□□□□□ -1.52
SMNDC1-205ENST00000477763 PEX1O43933 1283 aa5.54□□□□□ -1.52
SMNDC1-205ENST00000477763 TXNP10599 105 aaKnown RBP5.54□□□□□ -1.52
SMNDC1-205ENST00000477763 TYRP1P17643 537 aa5.54□□□□□ -1.52
SMNDC1-205ENST00000477763 ADRA1BP35368 520 aa5.54□□□□□ -1.52
SMNDC1-205ENST00000477763 FOLR3P41439 243 aa5.54□□□□□ -1.52
SMNDC1-205ENST00000477763 GCLCP48506 637 aaPredicted RBP5.54□□□□□ -1.52
SMNDC1-205ENST00000477763 CARSP49589 748 aaKnown RBP5.54□□□□□ -1.52
SMNDC1-205ENST00000477763 NXPH1P58417 271 aa5.54□□□□□ -1.52
SMNDC1-205ENST00000477763 HTRA4P83105 476 aaPredicted RBP5.54□□□□□ -1.52
SMNDC1-205ENST00000477763 ITIH3Q06033 890 aa5.54□□□□□ -1.52
SMNDC1-205ENST00000477763 INSCQ1MX18 579 aa5.54□□□□□ -1.52
SMNDC1-205ENST00000477763 NBPF8Q3BBV2 869 aa5.54□□□□□ -1.52
SMNDC1-205ENST00000477763 MGAT5BQ3V5L5 792 aa5.54□□□□□ -1.52
SMNDC1-205ENST00000477763 GORABQ5T7V8 394 aa5.54□□□□□ -1.52
SMNDC1-205ENST00000477763 KLHDC7AQ5VTJ3 777 aa5.54□□□□□ -1.52
SMNDC1-205ENST00000477763 SKAP1Q86WV1 359 aa5.54□□□□□ -1.52
SMNDC1-205ENST00000477763 GAS2L3Q86XJ1 694 aa5.54□□□□□ -1.52
SMNDC1-205ENST00000477763 MYLK4Q86YV6 388 aaPredicted RBP5.54□□□□□ -1.52
SMNDC1-205ENST00000477763 TXLNBQ8N3L3 684 aa5.54□□□□□ -1.52
SMNDC1-205ENST00000477763 SLC30A5Q8TAD4 765 aa5.54□□□□□ -1.52
SMNDC1-205ENST00000477763 SMCR8Q8TEV9 937 aaPredicted RBP5.54□□□□□ -1.52
SMNDC1-205ENST00000477763 RAPGEF4Q8WZA2 1011 aa5.54□□□□□ -1.52
SMNDC1-205ENST00000477763 PGBD1Q96JS3 809 aa5.54□□□□□ -1.52
SMNDC1-205ENST00000477763 PPP1R9BQ96SB3 815 aa5.54□□□□□ -1.52
SMNDC1-205ENST00000477763 NELL2Q99435 816 aa5.54□□□□□ -1.52
SMNDC1-205ENST00000477763 ARPC5LQ9BPX5 153 aa5.54□□□□□ -1.52
SMNDC1-205ENST00000477763 TTYH3Q9C0H2 523 aa5.54□□□□□ -1.52
SMNDC1-205ENST00000477763 CHST8Q9H2A9 424 aa5.54□□□□□ -1.52
SMNDC1-205ENST00000477763 XPNPEP3Q9NQH7 507 aa5.54□□□□□ -1.52
SMNDC1-205ENST00000477763 MYO1AQ9UBC5 1043 aa5.54□□□□□ -1.52
SMNDC1-205ENST00000477763 ZNF212Q9UDV6 495 aa5.54□□□□□ -1.52
SMNDC1-205ENST00000477763 RGS17Q9UGC6 210 aaPredicted RBP5.54□□□□□ -1.52
SMNDC1-205ENST00000477763 RIPOR2Q9Y4F9 1068 aa5.54□□□□□ -1.52
SMNDC1-205ENST00000477763 A0A1W2PPC4 97 aa5.53□□□□□ -1.52
SMNDC1-205ENST00000477763 F5H697 171 aa5.53□□□□□ -1.52
SMNDC1-205ENST00000477763 AREL1O15033 823 aa5.53□□□□□ -1.52
SMNDC1-205ENST00000477763 YY2O15391 372 aa5.53□□□□□ -1.52
SMNDC1-205ENST00000477763 MPPED1O15442 326 aa5.53□□□□□ -1.52
SMNDC1-205ENST00000477763 CHRM3P20309 590 aa5.53□□□□□ -1.52
SMNDC1-205ENST00000477763 FGFR2P21802 821 aa5.53□□□□□ -1.52
SMNDC1-205ENST00000477763 LRPAP1P30533 357 aa5.53□□□□□ -1.52
SMNDC1-205ENST00000477763 PXNP49023 591 aaPredicted RBP5.53□□□□□ -1.52
SMNDC1-205ENST00000477763 CHAF1AQ13111 956 aaPredicted RBP5.53□□□□□ -1.52
SMNDC1-205ENST00000477763 STK3Q13188 491 aa5.53□□□□□ -1.52
SMNDC1-205ENST00000477763 SLC29A2Q14542 456 aa5.53□□□□□ -1.52
SMNDC1-205ENST00000477763 PTPRRQ15256 657 aa5.53□□□□□ -1.52
SMNDC1-205ENST00000477763 PLA1AQ53H76 456 aa5.53□□□□□ -1.52
SMNDC1-205ENST00000477763 SFRP4Q6FHJ7 346 aaPredicted RBP5.53□□□□□ -1.52
SMNDC1-205ENST00000477763 SMC5Q8IY18 1101 aa5.53□□□□□ -1.52
SMNDC1-205ENST00000477763 FAM109AQ8N4B1 249 aa5.53□□□□□ -1.52
SMNDC1-205ENST00000477763 CCDC150Q8NCX0 1101 aa5.53□□□□□ -1.52
SMNDC1-205ENST00000477763 LPIN2Q92539 896 aa5.53□□□□□ -1.52
SMNDC1-205ENST00000477763 MESP1Q9BRJ9 268 aa5.53□□□□□ -1.52
SMNDC1-205ENST00000477763 POLR3GLQ9BT43 218 aa5.53□□□□□ -1.52
SMNDC1-205ENST00000477763 EIF2AQ9BY44 585 aaKnown RBP5.53□□□□□ -1.52
SMNDC1-205ENST00000477763 SMOC2Q9H3U7 446 aa5.53□□□□□ -1.52
SMNDC1-205ENST00000477763 SLITRK6Q9H5Y7 841 aa5.53□□□□□ -1.52
SMNDC1-205ENST00000477763 TRMT13Q9NUP7 481 aaKnown RBP5.53□□□□□ -1.52
SMNDC1-205ENST00000477763 F5H423 210 aaPredicted RBP5.52□□□□□ -1.53
SMNDC1-205ENST00000477763 LMNAP02545 664 aaKnown RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms