RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 PCDHB4Q9Y5E5 795 aa13.94□□□□□ -0.18
TOP3A-205ENST00000477508 C2orf16Q68DN1 1984 aa13.94□□□□□ -0.18
TOP3A-205ENST00000477508 RHOP08100 348 aa13.93□□□□□ -0.18
TOP3A-205ENST00000477508 ATP1A3P13637 1013 aa13.93□□□□□ -0.18
TOP3A-205ENST00000477508 ATF6P18850 670 aa13.93□□□□□ -0.18
TOP3A-205ENST00000477508 ACO1P21399 889 aaKnown RBP13.93□□□□□ -0.18
TOP3A-205ENST00000477508 SLC8A3P57103 927 aa13.93□□□□□ -0.18
TOP3A-205ENST00000477508 UBXN1Q04323 297 aa13.93□□□□□ -0.18
TOP3A-205ENST00000477508 KCNMA1Q12791 1236 aa13.93□□□□□ -0.18
TOP3A-205ENST00000477508 STILQ15468 1287 aa13.93□□□□□ -0.18
TOP3A-205ENST00000477508 ZNF394Q53GI3 561 aa13.93□□□□□ -0.18
TOP3A-205ENST00000477508 ARHGAP17Q68EM7 881 aa13.93□□□□□ -0.18
TOP3A-205ENST00000477508 TMEM270Q6UE05 265 aa13.93□□□□□ -0.18
TOP3A-205ENST00000477508 FAM35AQ86V20 835 aa13.93□□□□□ -0.18
TOP3A-205ENST00000477508 LUZP1Q86V48 1076 aa13.93□□□□□ -0.18
TOP3A-205ENST00000477508 C12orf29Q8N999 325 aa13.93□□□□□ -0.18
TOP3A-205ENST00000477508 SLC4A11Q8NBS3 891 aa13.93□□□□□ -0.18
TOP3A-205ENST00000477508 SLC2A14Q8TDB8 520 aa13.93□□□□□ -0.18
TOP3A-205ENST00000477508 KREMEN1Q96MU8 473 aa13.93□□□□□ -0.18
TOP3A-205ENST00000477508 ANP32EQ9BTT0 268 aa13.93□□□□□ -0.18
TOP3A-205ENST00000477508 ZNF518BQ9C0D4 1074 aa13.93□□□□□ -0.18
TOP3A-205ENST00000477508 DMAP1Q9NPF5 467 aaPredicted RBP13.93□□□□□ -0.18
TOP3A-205ENST00000477508 ZMYM5Q9UJ78 669 aa13.93□□□□□ -0.18
TOP3A-205ENST00000477508 MRPS23Q9Y3D9 190 aaKnown RBP13.93□□□□□ -0.18
TOP3A-205ENST00000477508 PTPRDP23468 1912 aa13.92□□□□□ -0.18
TOP3A-205ENST00000477508 CLDN5O00501 218 aa13.92□□□□□ -0.18
TOP3A-205ENST00000477508 SOAT2O75908 522 aa13.92□□□□□ -0.18
TOP3A-205ENST00000477508 NOL4O94818 638 aa13.92□□□□□ -0.18
TOP3A-205ENST00000477508 SERPINC1P01008 464 aa13.92□□□□□ -0.18
TOP3A-205ENST00000477508 FAM200BP0CF97 657 aa13.92□□□□□ -0.18
TOP3A-205ENST00000477508 VDRP11473 427 aa13.92□□□□□ -0.18
TOP3A-205ENST00000477508 CCDC130P13994 396 aa13.92□□□□□ -0.18
TOP3A-205ENST00000477508 ZP2Q05996 745 aa13.92□□□□□ -0.18
TOP3A-205ENST00000477508 ORC1Q13415 861 aa13.92□□□□□ -0.18
TOP3A-205ENST00000477508 DDR2Q16832 855 aa13.92□□□□□ -0.18
TOP3A-205ENST00000477508 CCDC142Q17RM4 750 aa13.92□□□□□ -0.18
TOP3A-205ENST00000477508 SGO2Q562F6 1265 aa13.92□□□□□ -0.18
TOP3A-205ENST00000477508 KLHDC7AQ5VTJ3 777 aa13.92□□□□□ -0.18
TOP3A-205ENST00000477508 PAQR9Q6ZVX9 377 aa13.92□□□□□ -0.18
TOP3A-205ENST00000477508 APTXQ7Z2E3 356 aaKnown RBP13.92□□□□□ -0.18
TOP3A-205ENST00000477508 TDRD5Q8NAT2 981 aaKnown RBP13.92□□□□□ -0.18
TOP3A-205ENST00000477508 GIPC2Q8TF65 315 aa13.92□□□□□ -0.18
TOP3A-205ENST00000477508 TRMT2BQ96GJ1 504 aaKnown RBP13.92□□□□□ -0.18
TOP3A-205ENST00000477508 MYRFLQ96LU7 910 aa13.92□□□□□ -0.18
TOP3A-205ENST00000477508 GCNAQ96QF7 691 aa13.92□□□□□ -0.18
TOP3A-205ENST00000477508 ERGIC2Q96RQ1 377 aa13.92□□□□□ -0.18
TOP3A-205ENST00000477508 GPR88Q9GZN0 384 aa13.92□□□□□ -0.18
TOP3A-205ENST00000477508 CSNK1G1Q9HCP0 422 aa13.92□□□□□ -0.18
TOP3A-205ENST00000477508 SIX2Q9NPC8 291 aa13.92□□□□□ -0.18
TOP3A-205ENST00000477508 FAM49BQ9NUQ9 324 aa13.92□□□□□ -0.18
TOP3A-205ENST00000477508 HCFC1R1Q9NWW0 138 aa13.92□□□□□ -0.18
TOP3A-205ENST00000477508 COMMD8Q9NX08 183 aa13.92□□□□□ -0.18
TOP3A-205ENST00000477508 CDH22Q9UJ99 828 aa13.92□□□□□ -0.18
TOP3A-205ENST00000477508 DNAJC12Q9UKB3 198 aa13.92□□□□□ -0.18
TOP3A-205ENST00000477508 NCOR1O75376 2440 aa13.91□□□□□ -0.18
TOP3A-205ENST00000477508 SLC38A8A6NNN8 435 aa13.91□□□□□ -0.18
TOP3A-205ENST00000477508 LOC730098B7Z3J9 87 aa13.91□□□□□ -0.18
TOP3A-205ENST00000477508 F8VP50 259 aa13.91□□□□□ -0.18
TOP3A-205ENST00000477508 AP1G2O75843 785 aa13.91□□□□□ -0.18
TOP3A-205ENST00000477508 RTN3O95197 1032 aaPredicted RBP13.91□□□□□ -0.18
TOP3A-205ENST00000477508 KRT5P13647 590 aa13.91□□□□□ -0.18
TOP3A-205ENST00000477508 CD19P15391 556 aa13.91□□□□□ -0.18
TOP3A-205ENST00000477508 CDC25CP30307 473 aa13.91□□□□□ -0.18
TOP3A-205ENST00000477508 ZNF132P52740 706 aa13.91□□□□□ -0.18
TOP3A-205ENST00000477508 ARHGAP44Q17R89 818 aa13.91□□□□□ -0.18
TOP3A-205ENST00000477508 DENND5BQ6ZUT9 1274 aa13.91□□□□□ -0.18
TOP3A-205ENST00000477508 ZDHHC14Q8IZN3 488 aa13.91□□□□□ -0.18
TOP3A-205ENST00000477508 RBBP8NLQ8NC74 664 aaPredicted RBP13.91□□□□□ -0.18
TOP3A-205ENST00000477508 ADAMTS19Q8TE59 1207 aa13.91□□□□□ -0.18
TOP3A-205ENST00000477508 SHC3Q92529 594 aa13.91□□□□□ -0.18
TOP3A-205ENST00000477508 KAT5Q92993 513 aa13.91□□□□□ -0.18
TOP3A-205ENST00000477508 RPGRIP1Q96KN7 1286 aa13.91□□□□□ -0.18
TOP3A-205ENST00000477508 PCMTD1Q96MG8 357 aaPredicted RBP13.91□□□□□ -0.18
TOP3A-205ENST00000477508 LPIN3Q9BQK8 851 aa13.91□□□□□ -0.18
TOP3A-205ENST00000477508 LSM14BQ9BX40 385 aaKnown RBP13.91□□□□□ -0.18
TOP3A-205ENST00000477508 DUSP16Q9BY84 665 aa13.91□□□□□ -0.18
TOP3A-205ENST00000477508 PNPLA8Q9NP80 782 aa13.91□□□□□ -0.18
TOP3A-205ENST00000477508 KRT82Q9NSB4 513 aa13.91□□□□□ -0.18
TOP3A-205ENST00000477508 GDE1Q9NZC3 331 aa13.91□□□□□ -0.18
TOP3A-205ENST00000477508 HESX1Q9UBX0 185 aa13.91□□□□□ -0.18
TOP3A-205ENST00000477508 CDH7Q9ULB5 785 aa13.91□□□□□ -0.18
TOP3A-205ENST00000477508 DENND4AQ7Z401 1863 aa13.91□□□□□ -0.18
TOP3A-205ENST00000477508 TCF20Q9UGU0 1960 aaKnown RBP13.91□□□□□ -0.18
TOP3A-205ENST00000477508 DOCK6Q96HP0 2047 aa13.9□□□□□ -0.18
TOP3A-205ENST00000477508 C19orf67A6NJJ6 358 aa13.9□□□□□ -0.18
TOP3A-205ENST00000477508 SOBPA7XYQ1 873 aa13.9□□□□□ -0.18
TOP3A-205ENST00000477508 MED7O43513 233 aa13.9□□□□□ -0.18
TOP3A-205ENST00000477508 MYL4P12829 197 aa13.9□□□□□ -0.18
TOP3A-205ENST00000477508 UCHL3P15374 230 aa13.9□□□□□ -0.18
TOP3A-205ENST00000477508 HMGA1P17096 107 aaKnown RBP13.9□□□□□ -0.18
TOP3A-205ENST00000477508 NPR3P17342 541 aa13.9□□□□□ -0.18
TOP3A-205ENST00000477508 ADORA2BP29275 332 aa13.9□□□□□ -0.18
TOP3A-205ENST00000477508 GBP2P32456 591 aaPredicted RBP13.9□□□□□ -0.18
TOP3A-205ENST00000477508 PPP3CCP48454 512 aa13.9□□□□□ -0.18
TOP3A-205ENST00000477508 CDR1P51861 262 aa13.9□□□□□ -0.18
TOP3A-205ENST00000477508 BPIFB4P59827 614 aa13.9□□□□□ -0.18
TOP3A-205ENST00000477508 NTHL1P78549 312 aa13.9□□□□□ -0.18
TOP3A-205ENST00000477508 SYCP1Q15431 976 aa13.9□□□□□ -0.18
TOP3A-205ENST00000477508 CNGA2Q16280 664 aa13.9□□□□□ -0.18
TOP3A-205ENST00000477508 ARHGAP15Q53QZ3 475 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms