RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 FAM71AQ8IYT1 594 aa16.85■□□□□ 0.29
COPS3-207ENST00000477299 UBA3Q8TBC4 463 aa16.85■□□□□ 0.29
COPS3-207ENST00000477299 C2orf15Q8WU43 125 aaKnown RBP16.85■□□□□ 0.29
COPS3-207ENST00000477299 SMG7Q92540 1137 aaKnown RBP16.85■□□□□ 0.29
COPS3-207ENST00000477299 JAKMIP2Q96AA8 810 aa16.85■□□□□ 0.29
COPS3-207ENST00000477299 ADAM7Q9H2U9 754 aa16.85■□□□□ 0.29
COPS3-207ENST00000477299 ZNF334Q9HCZ1 680 aaPredicted RBP16.85■□□□□ 0.29
COPS3-207ENST00000477299 KRT82Q9NSB4 513 aa16.85■□□□□ 0.29
COPS3-207ENST00000477299 MYO16Q9Y6X6 1858 aa16.84■□□□□ 0.29
COPS3-207ENST00000477299 A0A1W2PQC6 194 aa16.84■□□□□ 0.29
COPS3-207ENST00000477299 F8VZ95 297 aa16.84■□□□□ 0.29
COPS3-207ENST00000477299 O00370 1275 aa16.84■□□□□ 0.29
COPS3-207ENST00000477299 MBTPS2O43462 519 aa16.84■□□□□ 0.29
COPS3-207ENST00000477299 AP1G2O75843 785 aa16.84■□□□□ 0.29
COPS3-207ENST00000477299 GFPT2O94808 682 aa16.84■□□□□ 0.29
COPS3-207ENST00000477299 PAPLNO95428 1278 aa16.84■□□□□ 0.29
COPS3-207ENST00000477299 LRG1P02750 347 aa16.84■□□□□ 0.29
COPS3-207ENST00000477299 PAEPP09466 180 aa16.84■□□□□ 0.29
COPS3-207ENST00000477299 VDRP11473 427 aa16.84■□□□□ 0.29
COPS3-207ENST00000477299 MAP3K7CLP57077 242 aa16.84■□□□□ 0.29
COPS3-207ENST00000477299 USP46P62068 366 aa16.84■□□□□ 0.29
COPS3-207ENST00000477299 SMARCB1Q12824 385 aa16.84■□□□□ 0.29
COPS3-207ENST00000477299 MAPRE1Q15691 268 aaKnown RBP16.84■□□□□ 0.29
COPS3-207ENST00000477299 GOLGA7BQ2TAP0 167 aa16.84■□□□□ 0.29
COPS3-207ENST00000477299 SGO2Q562F6 1265 aa16.84■□□□□ 0.29
COPS3-207ENST00000477299 ARHGAP17Q68EM7 881 aa16.84■□□□□ 0.29
COPS3-207ENST00000477299 TTC39CQ8N584 583 aa16.84■□□□□ 0.29
COPS3-207ENST00000477299 SMRP1Q8NCR6 262 aa16.84■□□□□ 0.29
COPS3-207ENST00000477299 BAP1Q92560 729 aa16.84■□□□□ 0.29
COPS3-207ENST00000477299 FUBP3Q96I24 572 aaKnown RBP eCLIP16.84■□□□□ 0.29
COPS3-207ENST00000477299 LRRC3Q9BY71 257 aa16.84■□□□□ 0.29
COPS3-207ENST00000477299 TTYH3Q9C0H2 523 aa16.84■□□□□ 0.29
COPS3-207ENST00000477299 ABCB6Q9NP58 842 aa16.84■□□□□ 0.29
COPS3-207ENST00000477299 USP15Q9Y4E8 981 aaPredicted RBP16.84■□□□□ 0.29
COPS3-207ENST00000477299 SRGAP2BP0DMP2 458 aa16.83■□□□□ 0.28
COPS3-207ENST00000477299 HMGA1P17096 107 aaKnown RBP16.83■□□□□ 0.28
COPS3-207ENST00000477299 GJA1P17302 382 aa16.83■□□□□ 0.28
COPS3-207ENST00000477299 HOXB8P17481 243 aaPredicted RBP16.83■□□□□ 0.28
COPS3-207ENST00000477299 CCR2P41597 374 aa16.83■□□□□ 0.28
COPS3-207ENST00000477299 MAGEA11P43364 429 aa16.83■□□□□ 0.28
COPS3-207ENST00000477299 ALDH1A3P47895 512 aa16.83■□□□□ 0.28
COPS3-207ENST00000477299 TUFMP49411 452 aaKnown RBP16.83■□□□□ 0.28
COPS3-207ENST00000477299 E4F1Q66K89 784 aaPredicted RBP16.83■□□□□ 0.28
COPS3-207ENST00000477299 DENND1BQ6P3S1 775 aa16.83■□□□□ 0.28
COPS3-207ENST00000477299 CLEC20AQ6ZU45 233 aa16.83■□□□□ 0.28
COPS3-207ENST00000477299 GPRIN1Q7Z2K8 1008 aa16.83■□□□□ 0.28
COPS3-207ENST00000477299 DNAJB7Q7Z6W7 309 aaPredicted RBP16.83■□□□□ 0.28
COPS3-207ENST00000477299 UNC80Q8N2C7 3258 aa16.83■□□□□ 0.28
COPS3-207ENST00000477299 CMASQ8NFW8 434 aaPredicted RBP16.83■□□□□ 0.28
COPS3-207ENST00000477299 CPLX3Q8WVH0 158 aa16.83■□□□□ 0.28
COPS3-207ENST00000477299 ZNF606Q8WXB4 792 aa16.83■□□□□ 0.28
COPS3-207ENST00000477299 TCEAL4Q96EI5 215 aa16.83■□□□□ 0.28
COPS3-207ENST00000477299 CORO1BQ9BR76 489 aa16.83■□□□□ 0.28
COPS3-207ENST00000477299 FAM124BQ9H5Z6 455 aaPredicted RBP16.83■□□□□ 0.28
COPS3-207ENST00000477299 PIDD1Q9HB75 910 aa16.83■□□□□ 0.28
COPS3-207ENST00000477299 MYO10Q9HD67 2058 aa16.83■□□□□ 0.28
COPS3-207ENST00000477299 ZDHHC7Q9NXF8 308 aa16.83■□□□□ 0.28
COPS3-207ENST00000477299 HSFX1Q9UBD0 423 aa16.83■□□□□ 0.28
COPS3-207ENST00000477299 TSPAN16Q9UKR8 245 aa16.83■□□□□ 0.28
COPS3-207ENST00000477299 MAFFQ9ULX9 164 aa16.83■□□□□ 0.28
COPS3-207ENST00000477299 COG5Q9UP83 839 aa16.83■□□□□ 0.28
COPS3-207ENST00000477299 FSD2A1L4K1 749 aa16.82■□□□□ 0.28
COPS3-207ENST00000477299 SLC38A8A6NNN8 435 aa16.82■□□□□ 0.28
COPS3-207ENST00000477299 HHLA1C9JL84 531 aa16.82■□□□□ 0.28
COPS3-207ENST00000477299 GABBR2O75899 941 aa16.82■□□□□ 0.28
COPS3-207ENST00000477299 MICAL2O94851 1124 aa16.82■□□□□ 0.28
COPS3-207ENST00000477299 HNRNPA1P09651 372 aaKnown RBP eCLIP16.82■□□□□ 0.28
COPS3-207ENST00000477299 IL9P15248 144 aa16.82■□□□□ 0.28
COPS3-207ENST00000477299 HOXA9P31269 272 aa16.82■□□□□ 0.28
COPS3-207ENST00000477299 EPHB3P54753 998 aa16.82■□□□□ 0.28
COPS3-207ENST00000477299 GOLGA8FQ08AF8 430 aa16.82■□□□□ 0.28
COPS3-207ENST00000477299 GOLGA8DPQ0D2H9 430 aa16.82■□□□□ 0.28
COPS3-207ENST00000477299 SLC5A9Q2M3M2 681 aa16.82■□□□□ 0.28
COPS3-207ENST00000477299 LEXMQ3ZCV2 418 aa16.82■□□□□ 0.28
COPS3-207ENST00000477299 PKDCCQ504Y2 493 aa16.82■□□□□ 0.28
COPS3-207ENST00000477299 SARM1Q6SZW1 724 aa16.82■□□□□ 0.28
COPS3-207ENST00000477299 VSTM1Q6UX27 236 aa16.82■□□□□ 0.28
COPS3-207ENST00000477299 TMC8Q8IU68 726 aa16.82■□□□□ 0.28
COPS3-207ENST00000477299 ST13P5Q8NFI4 369 aaPredicted RBP16.82■□□□□ 0.28
COPS3-207ENST00000477299 SCAMP5Q8TAC9 235 aa16.82■□□□□ 0.28
COPS3-207ENST00000477299 SUSD6Q92537 303 aa16.82■□□□□ 0.28
COPS3-207ENST00000477299 FAM81BQ96LP2 452 aa16.82■□□□□ 0.28
COPS3-207ENST00000477299 DUSP16Q9BY84 665 aa16.82■□□□□ 0.28
COPS3-207ENST00000477299 TRIM5Q9C035 493 aa16.82■□□□□ 0.28
COPS3-207ENST00000477299 POMKQ9H5K3 350 aa16.82■□□□□ 0.28
COPS3-207ENST00000477299 MAGED2Q9UNF1 606 aaPredicted RBP16.82■□□□□ 0.28
COPS3-207ENST00000477299 TNFRSF10BO14763 440 aa16.81■□□□□ 0.28
COPS3-207ENST00000477299 THAP12O43422 761 aa16.81■□□□□ 0.28
COPS3-207ENST00000477299 MOSPD3O75425 235 aa16.81■□□□□ 0.28
COPS3-207ENST00000477299 FAM200BP0CF97 657 aa16.81■□□□□ 0.28
COPS3-207ENST00000477299 PTPN2P17706 415 aa16.81■□□□□ 0.28
COPS3-207ENST00000477299 TRIM21P19474 475 aaKnown RBP16.81■□□□□ 0.28
COPS3-207ENST00000477299 SP100P23497 879 aaPredicted RBP16.81■□□□□ 0.28
COPS3-207ENST00000477299 GNA15P30679 374 aa16.81■□□□□ 0.28
COPS3-207ENST00000477299 SOX5P35711 763 aa16.81■□□□□ 0.28
COPS3-207ENST00000477299 PGFP49763 221 aa16.81■□□□□ 0.28
COPS3-207ENST00000477299 ARID5AQ03989 594 aa16.81■□□□□ 0.28
COPS3-207ENST00000477299 PDE4CQ08493 712 aa16.81■□□□□ 0.28
COPS3-207ENST00000477299 IFRD2Q12894 506 aaPredicted RBP16.81■□□□□ 0.28
COPS3-207ENST00000477299 PLD1Q13393 1074 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms