RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, human

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NSMCE4A-208	ENST00000477289	CYP3A4	P08684	503 aa		5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	CYBA	P13498	195 aa		5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	FDPS	P14324	419 aa	Known RBP	5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	TGM1	P22735	817 aa		5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	EDNRB	P24530	442 aa		5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	ADCYAP1R1	P41586	468 aa		5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	GLRB	P48167	497 aa		5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	EPHA5	P54756	1037 aa		5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	GPR85	P60893	370 aa		5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	PFKP	Q01813	784 aa		5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	SF3A1	Q15459	793 aa	Known RBP	5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	DGKD	Q16760	1214 aa		5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	SLC35G1	Q2M3R5	365 aa		5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	DUSP28	Q4G0W2	176 aa		5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	PRR16	Q569H4	304 aa		5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	PRAMEF19	Q5SWL8	479 aa		5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	YOD1	Q5VVQ6	348 aa	Predicted RBP	5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	FAM160B1	Q5W0V3	765 aa		5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	CD276	Q5ZPR3	534 aa		5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	MIS18BP1	Q6P0N0	1132 aa		5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	MOXD1	Q6UVY6	613 aa		5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	TLK2	Q86UE8	772 aa		5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	NOSTRIN	Q8IVI9	506 aa		5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	FBXO16	Q8IX29	292 aa	Predicted RBP	5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	STPG3	Q8N7X2	389 aa		5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	MORC4	Q8TE76	937 aa		5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	U2AF1L4	Q8WU68	220 aa	Known RBP	5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	ABHD8	Q96I13	439 aa		5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	AJUBA	Q96IF1	538 aa		5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	ZNF333	Q96JL9	665 aa		5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	PGBD1	Q96JS3	809 aa		5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	FAM20A	Q96MK3	541 aa		5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	GLT1D1	Q96MS3	346 aa		5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	CCDC43	Q96MW1	224 aa	Known RBP	5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	SPATA33	Q96N06	139 aa		5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	AIFM3	Q96NN9	605 aa		5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	ZFYVE21	Q9BQ24	234 aa		5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	SENP7	Q9BQF6	1050 aa		5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	HTATIP2	Q9BUP3	242 aa		5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	KATNAL1	Q9BW62	490 aa		5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	TEKT3	Q9BXF9	490 aa		5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	SEZ6L	Q9BYH1	1024 aa		5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	TMEM260	Q9NX78	707 aa		5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	DDX25	Q9UHL0	483 aa	Known RBP	5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	CFAP45	Q9UL16	551 aa		5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	ZNF215	Q9UL58	517 aa	Predicted RBP	5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	R3HCC1	Q9Y3T6	440 aa	Known RBP	5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	PARP14	Q460N5	1801 aa		5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	ZNF236	Q9UL36	1845 aa		5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	BAZ2B	Q9UIF8	2168 aa	Known RBP	5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	RLF	Q13129	1914 aa		5.03	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	ZNF839	A8K0R7	811 aa		5.03	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	IPO5	O00410	1097 aa	Known RBP	5.03	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	LAD1	O00515	517 aa		5.03	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	TBX3	O15119	743 aa		5.03	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	NEMF	O60524	1076 aa		5.03	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	ZNF623	O75123	536 aa		5.03	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	GGPS1	O95749	300 aa		5.03	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	SOD2	P04179	222 aa		5.03	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	MYL3	P08590	195 aa		5.03	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	GNAT1	P11488	350 aa		5.03	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	NCL	P19338	710 aa	Known RBP	5.03	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	SYT1	P21579	422 aa		5.03	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	CCND3	P30281	292 aa	Predicted RBP	5.03	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	SFN	P31947	248 aa		5.03	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	CSF2RB	P32927	897 aa		5.03	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	ICAM3	P32942	547 aa		5.03	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	JAK3	P52333	1124 aa		5.03	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	SP4	Q02446	784 aa		5.03	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	SPIRE1	Q08AE8	756 aa		5.03	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	CALCRL	Q16602	461 aa		5.03	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	TTC38	Q5R3I4	469 aa		5.03	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	MAP3K21	Q5TCX8	1036 aa		5.03	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	LRCH2	Q5VUJ6	765 aa		5.03	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	PPP4R3A	Q6IN85	833 aa		5.03	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	NECAB2	Q7Z6G3	386 aa		5.03	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	5.03	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	CKAP2L	Q8IYA6	745 aa		5.03	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	SMAP1	Q8IYB5	467 aa	Predicted RBP	5.03	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	SLC43A3	Q8NBI5	491 aa		5.03	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	RASSF8	Q8NHQ8	419 aa		5.03	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	ERMN	Q8TAM6	284 aa		5.03	□□□□□ -1.6
NSMCE4A-208	ENST00000477289		Q8TCH9	128 aa		5.03	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	SH3RF2	Q8TEC5	729 aa		5.03	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	SEPT1	Q8WYJ6	367 aa		5.03	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	GLG1	Q92896	1179 aa		5.03	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	INPP4A	Q96PE3	977 aa	Predicted RBP	5.03	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	DEF6	Q9H4E7	631 aa		5.03	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	FLRT1	Q9NZU1	646 aa		5.03	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	COL20A1	Q9P218	1284 aa		5.03	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	ARHGAP20	Q9P2F6	1191 aa		5.03	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	SLC9A2	Q9UBY0	812 aa		5.03	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	DSE	Q9UL01	958 aa		5.03	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	UBIAD1	Q9Y5Z9	338 aa		5.03	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	SLC4A7	Q9Y6M7	1214 aa		5.03	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	FRMPD4	Q14CM0	1322 aa		5.02	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	MROH7	Q68CQ1	1323 aa		5.02	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	ZNFX1	Q9P2E3	1918 aa	Known RBP	5.02	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	GOLGA6L4	A6NEF3	574 aa		5.02	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	DDX39A	O00148	427 aa	Known RBP	5.02	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms