RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 RPS7P62081 194 aaKnown RBP19.29■□□□□ 0.68
VARS2-209ENST00000477288 UCMAQ8WVF2 138 aa19.29■□□□□ 0.68
VARS2-209ENST00000477288 TFB1MQ8WVM0 346 aaKnown RBP19.29■□□□□ 0.68
VARS2-209ENST00000477288 TSEN34Q9BSV6 310 aaKnown RBP19.29■□□□□ 0.68
VARS2-209ENST00000477288 ITIH6Q6UXX5 1313 aa19.29■□□□□ 0.68
VARS2-209ENST00000477288 B2RBV5 119 aa19.29■□□□□ 0.68
VARS2-209ENST00000477288 F5H5T6 163 aa19.29■□□□□ 0.68
VARS2-209ENST00000477288 CPA2P48052 419 aa19.29■□□□□ 0.68
VARS2-209ENST00000477288 AASDHQ4L235 1098 aaPredicted RBP19.29■□□□□ 0.68
VARS2-209ENST00000477288 TRAPPC11Q7Z392 1133 aa19.29■□□□□ 0.68
VARS2-209ENST00000477288 RBBP8Q99708 897 aa19.29■□□□□ 0.68
VARS2-209ENST00000477288 GOLPH3Q9H4A6 298 aa19.29■□□□□ 0.68
VARS2-209ENST00000477288 DDIT4Q9NX09 232 aa19.29■□□□□ 0.68
VARS2-209ENST00000477288 VWA5AO00534 786 aa19.29■□□□□ 0.68
VARS2-209ENST00000477288 CAMTA2O94983 1202 aa19.29■□□□□ 0.68
VARS2-209ENST00000477288 GYS1P13807 737 aa19.29■□□□□ 0.68
VARS2-209ENST00000477288 CHI3L1P36222 383 aaPredicted RBP19.29■□□□□ 0.68
VARS2-209ENST00000477288 DEFA1P59665 94 aa19.29■□□□□ 0.68
VARS2-209ENST00000477288 DEFA3P59666 94 aa19.29■□□□□ 0.68
VARS2-209ENST00000477288 ORC1Q13415 861 aa19.29■□□□□ 0.68
VARS2-209ENST00000477288 VPS72Q15906 364 aa19.29■□□□□ 0.68
VARS2-209ENST00000477288 CCDC92Q53HC0 331 aaPredicted RBP19.29■□□□□ 0.68
VARS2-209ENST00000477288 STYK1Q6J9G0 422 aa19.29■□□□□ 0.68
VARS2-209ENST00000477288 POTEAQ6S8J7 498 aa19.29■□□□□ 0.68
VARS2-209ENST00000477288 OPTNQ96CV9 577 aa19.29■□□□□ 0.68
VARS2-209ENST00000477288 YME1L1Q96TA2 773 aa19.29■□□□□ 0.68
VARS2-209ENST00000477288 RIT2Q99578 217 aa19.29■□□□□ 0.68
VARS2-209ENST00000477288 PLA2G12BQ9BX93 195 aa19.29■□□□□ 0.68
VARS2-209ENST00000477288 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.29■□□□□ 0.683e-6■□□□□ 10
VARS2-209ENST00000477288 TRMT6Q9UJA5 497 aaKnown RBP19.29■□□□□ 0.68
VARS2-209ENST00000477288 UBQLN1Q9UMX0 589 aaKnown RBP19.29■□□□□ 0.68
VARS2-209ENST00000477288 RPS12P25398 132 aaKnown RBP19.28■□□□□ 0.68
VARS2-209ENST00000477288 MIB1Q86YT6 1006 aa19.28■□□□□ 0.68
VARS2-209ENST00000477288 CCT7Q99832 543 aa19.28■□□□□ 0.68
VARS2-209ENST00000477288 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.28■□□□□ 0.68
VARS2-209ENST00000477288 AGPAT5Q9NUQ2 364 aa19.28■□□□□ 0.68
VARS2-209ENST00000477288 CDH16O75309 829 aa19.28■□□□□ 0.68
VARS2-209ENST00000477288 AP1G2O75843 785 aa19.28■□□□□ 0.68
VARS2-209ENST00000477288 TMEM154Q6P9G4 183 aa19.28■□□□□ 0.68
VARS2-209ENST00000477288 LUZP2Q86TE4 346 aa19.28■□□□□ 0.68
VARS2-209ENST00000477288 THUMPD3Q9BV44 507 aaKnown RBP19.28■□□□□ 0.68
VARS2-209ENST00000477288 PDS5AQ29RF7 1337 aaKnown RBP19.28■□□□□ 0.68
VARS2-209ENST00000477288 EIF3DO15371 548 aaKnown RBP eCLIP19.28■□□□□ 0.683e-6■■■□□ 15.5
VARS2-209ENST00000477288 SNRPAP09012 282 aaKnown RBP19.28■□□□□ 0.68
VARS2-209ENST00000477288 MAGEA4P43358 317 aa19.28■□□□□ 0.68
VARS2-209ENST00000477288 EIF2B5Q13144 721 aaKnown RBP19.28■□□□□ 0.68
VARS2-209ENST00000477288 UGT3A1Q6NUS8 523 aa19.28■□□□□ 0.68
VARS2-209ENST00000477288 FBXO32Q969P5 355 aa19.28■□□□□ 0.68
VARS2-209ENST00000477288 NDEL1Q9GZM8 345 aa19.28■□□□□ 0.68
VARS2-209ENST00000477288 UBTFL6P0CB48 400 aaPredicted RBP19.28■□□□□ 0.68
VARS2-209ENST00000477288 NCKAP1LP55160 1127 aa19.28■□□□□ 0.68
VARS2-209ENST00000477288 FEZF2Q8TBJ5 459 aa19.28■□□□□ 0.68
VARS2-209ENST00000477288 MRPS31Q92665 395 aaKnown RBP19.28■□□□□ 0.68
VARS2-209ENST00000477288 CHST12Q9NRB3 414 aa19.28■□□□□ 0.68
VARS2-209ENST00000477288 TBC1D23Q9NUY8 699 aa19.28■□□□□ 0.68
VARS2-209ENST00000477288 TRIM10Q9UDY6 481 aa19.28■□□□□ 0.68
VARS2-209ENST00000477288 ZC3H11AO75152 810 aaKnown RBP eCLIP19.28■□□□□ 0.687e-22■■■■■ 33.3
VARS2-209ENST00000477288 ENDOD1O94919 500 aa19.28■□□□□ 0.68
VARS2-209ENST00000477288 ATN1P54259 1190 aaPredicted RBP19.28■□□□□ 0.68
VARS2-209ENST00000477288 FMR1Q06787 632 aaKnown RBP eCLIP19.28■□□□□ 0.68
VARS2-209ENST00000477288 CNTN1Q12860 1018 aa19.28■□□□□ 0.68
VARS2-209ENST00000477288 C2orf81A6NN90 581 aa19.27■□□□□ 0.68
VARS2-209ENST00000477288 B3GAT3O94766 335 aa19.27■□□□□ 0.68
VARS2-209ENST00000477288 RHOBTB3O94955 611 aa19.27■□□□□ 0.68
VARS2-209ENST00000477288 STK4Q13043 487 aa19.27■□□□□ 0.68
VARS2-209ENST00000477288 OTOAQ7RTW8 1153 aa19.27■□□□□ 0.68
VARS2-209ENST00000477288 IGDCC4Q8TDY8 1250 aa19.27■□□□□ 0.68
VARS2-209ENST00000477288 CHORDC1Q9UHD1 332 aaPredicted RBP19.27■□□□□ 0.68
VARS2-209ENST00000477288 MAP3K13O43283 966 aa19.27■□□□□ 0.68
VARS2-209ENST00000477288 SLC26A4O43511 780 aa19.27■□□□□ 0.68
VARS2-209ENST00000477288 RNASEH1O60930 286 aaKnown RBP19.27■□□□□ 0.68
VARS2-209ENST00000477288 ITGA8P53708 1063 aa19.27■□□□□ 0.68
VARS2-209ENST00000477288 AGGF1Q8N302 714 aaeCLIP19.27■□□□□ 0.68
VARS2-209ENST00000477288 ALDH8A1Q9H2A2 487 aaPredicted RBP19.27■□□□□ 0.68
VARS2-209ENST00000477288 PPP1R37O75864 691 aa19.27■□□□□ 0.68
VARS2-209ENST00000477288 SOAT2O75908 522 aa19.27■□□□□ 0.68
VARS2-209ENST00000477288 ACO1P21399 889 aaKnown RBP19.27■□□□□ 0.68
VARS2-209ENST00000477288 MLH1P40692 756 aa19.27■□□□□ 0.68
VARS2-209ENST00000477288 EXOSC10Q01780 885 aaKnown RBP19.27■□□□□ 0.68
VARS2-209ENST00000477288 NAB2Q15742 525 aa19.27■□□□□ 0.68
VARS2-209ENST00000477288 CLEC16AQ2KHT3 1053 aa19.27■□□□□ 0.68
VARS2-209ENST00000477288 HDDC2Q7Z4H3 204 aa19.27■□□□□ 0.68
VARS2-209ENST00000477288 KIF2BQ8N4N8 673 aa19.27■□□□□ 0.68
VARS2-209ENST00000477288 SCUBE2Q9NQ36 999 aa19.27■□□□□ 0.68
VARS2-209ENST00000477288 PAPOLBQ9NRJ5 636 aaKnown RBP19.27■□□□□ 0.68
VARS2-209ENST00000477288 IMPAD1Q9NX62 359 aa19.27■□□□□ 0.68
VARS2-209ENST00000477288 SLC2A3P11169 496 aa19.27■□□□□ 0.67
VARS2-209ENST00000477288 PTPRMP28827 1452 aa19.27■□□□□ 0.67
VARS2-209ENST00000477288 TTLL9Q3SXZ7 439 aa19.27■□□□□ 0.67
VARS2-209ENST00000477288 ANKS6Q68DC2 871 aa19.27■□□□□ 0.67
VARS2-209ENST00000477288 CNBD2Q96M20 576 aa19.27■□□□□ 0.67
VARS2-209ENST00000477288 COPS7BQ9H9Q2 264 aaPredicted RBP19.27■□□□□ 0.67
VARS2-209ENST00000477288 GRID1Q9ULK0 1009 aa19.27■□□□□ 0.67
VARS2-209ENST00000477288 MTSS1O43312 755 aa19.26■□□□□ 0.67
VARS2-209ENST00000477288 MTERF3Q96E29 417 aa19.26■□□□□ 0.67
VARS2-209ENST00000477288 SPACA6W5XKT8 324 aa19.26■□□□□ 0.67
VARS2-209ENST00000477288 ANXA9O76027 345 aa19.26■□□□□ 0.67
VARS2-209ENST00000477288 SFSWAPQ12872 951 aaKnown RBP19.26■□□□□ 0.67
VARS2-209ENST00000477288 IRX2Q9BZI1 471 aaPredicted RBP19.26■□□□□ 0.67
VARS2-209ENST00000477288 KCTD10Q9H3F6 313 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms