RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 KIFC3Q9BVG8 833 aa7.88□□□□□ -1.15
BRCA1-214ENST00000477152 TARS2Q9BW92 718 aaKnown RBP7.88□□□□□ -1.15
BRCA1-214ENST00000477152 SLITRK6Q9H5Y7 841 aa7.88□□□□□ -1.15
BRCA1-214ENST00000477152 C8orf33Q9H7E9 229 aaPredicted RBP7.88□□□□□ -1.15
BRCA1-214ENST00000477152 UPF2Q9HAU5 1272 aaKnown RBP7.88□□□□□ -1.15
BRCA1-214ENST00000477152 CACNG4Q9UBN1 327 aa7.88□□□□□ -1.15
BRCA1-214ENST00000477152 NXF1Q9UBU9 619 aaKnown RBP7.88□□□□□ -1.15
BRCA1-214ENST00000477152 NAGPAQ9UK23 515 aa7.88□□□□□ -1.15
BRCA1-214ENST00000477152 FBXL5Q9UKA1 691 aa7.88□□□□□ -1.15
BRCA1-214ENST00000477152 TRIOO75962 3097 aa7.88□□□□□ -1.15
BRCA1-214ENST00000477152 ZFHX2Q9C0A1 2572 aaPredicted RBP7.88□□□□□ -1.15
BRCA1-214ENST00000477152 FAM186AA6NE01 2351 aa7.88□□□□□ -1.15
BRCA1-214ENST00000477152 ADAM12O43184 909 aa7.88□□□□□ -1.15
BRCA1-214ENST00000477152 CNR2P34972 360 aa7.88□□□□□ -1.15
BRCA1-214ENST00000477152 LIG4P49917 911 aa7.88□□□□□ -1.15
BRCA1-214ENST00000477152 ZRSR1Q15695 479 aaKnown RBP7.88□□□□□ -1.15
BRCA1-214ENST00000477152 TAF12Q16514 161 aa7.88□□□□□ -1.15
BRCA1-214ENST00000477152 ARL6IP4Q66PJ3 421 aaKnown RBP7.88□□□□□ -1.15
BRCA1-214ENST00000477152 MCTP1Q6DN14 999 aa7.88□□□□□ -1.15
BRCA1-214ENST00000477152 METTL23Q86XA0 190 aa7.88□□□□□ -1.15
BRCA1-214ENST00000477152 BEST2Q8NFU1 509 aa7.88□□□□□ -1.15
BRCA1-214ENST00000477152 RASSF8Q8NHQ8 419 aa7.88□□□□□ -1.15
BRCA1-214ENST00000477152 FAM3CQ92520 227 aa7.88□□□□□ -1.15
BRCA1-214ENST00000477152 AK8Q96MA6 479 aa7.88□□□□□ -1.15
BRCA1-214ENST00000477152 TBC1D32Q96NH3 1257 aa7.88□□□□□ -1.15
BRCA1-214ENST00000477152 GCNAQ96QF7 691 aa7.88□□□□□ -1.15
BRCA1-214ENST00000477152 PTPRHQ9HD43 1115 aa7.88□□□□□ -1.15
BRCA1-214ENST00000477152 HCFC1R1Q9NWW0 138 aa7.88□□□□□ -1.15
BRCA1-214ENST00000477152 ANKFY1Q9P2R3 1169 aa7.88□□□□□ -1.15
BRCA1-214ENST00000477152 DSEQ9UL01 958 aa7.88□□□□□ -1.15
BRCA1-214ENST00000477152 ODF2LQ9ULJ1 636 aa7.88□□□□□ -1.15
BRCA1-214ENST00000477152 WDR27A2RRH5 827 aa7.87□□□□□ -1.15
BRCA1-214ENST00000477152 E9PMD0 336 aa7.87□□□□□ -1.15
BRCA1-214ENST00000477152 SLC16A4O15374 487 aa7.87□□□□□ -1.15
BRCA1-214ENST00000477152 KRT18P05783 430 aaKnown RBP7.87□□□□□ -1.15
BRCA1-214ENST00000477152 MYL4P12829 197 aa7.87□□□□□ -1.15
BRCA1-214ENST00000477152 PROZP22891 400 aa7.87□□□□□ -1.15
BRCA1-214ENST00000477152 RACK1P63244 317 aaKnown RBP7.87□□□□□ -1.15
BRCA1-214ENST00000477152 AMPD2Q01433 879 aa7.87□□□□□ -1.15
BRCA1-214ENST00000477152 TWF1Q12792 350 aa7.87□□□□□ -1.15
BRCA1-214ENST00000477152 SMARCB1Q12824 385 aa7.87□□□□□ -1.15
BRCA1-214ENST00000477152 MYBPC2Q14324 1141 aa7.87□□□□□ -1.15
BRCA1-214ENST00000477152 VEPH1Q14D04 833 aa7.87□□□□□ -1.15
BRCA1-214ENST00000477152 C1orf186Q6ZWK4 172 aa7.87□□□□□ -1.15
BRCA1-214ENST00000477152 CCNJLQ8IV13 435 aa7.87□□□□□ -1.15
BRCA1-214ENST00000477152 CELF5Q8N6W0 485 aaKnown RBP7.87□□□□□ -1.15
BRCA1-214ENST00000477152 SYT2Q8N9I0 419 aaPredicted RBP7.87□□□□□ -1.15
BRCA1-214ENST00000477152 FEZF2Q8TBJ5 459 aa7.87□□□□□ -1.15
BRCA1-214ENST00000477152 RPP25Q9BUL9 199 aaKnown RBP7.87□□□□□ -1.15
BRCA1-214ENST00000477152 ACBD3Q9H3P7 528 aa7.87□□□□□ -1.15
BRCA1-214ENST00000477152 RPF1Q9H9Y2 349 aaKnown RBP7.87□□□□□ -1.15
BRCA1-214ENST00000477152 GOLGA2P5Q9HBQ8 144 aa7.87□□□□□ -1.15
BRCA1-214ENST00000477152 THG1LQ9NWX6 298 aaKnown RBP7.87□□□□□ -1.15
BRCA1-214ENST00000477152 HSFX1Q9UBD0 423 aa7.87□□□□□ -1.15
BRCA1-214ENST00000477152 DOCK6Q96HP0 2047 aa7.87□□□□□ -1.15
BRCA1-214ENST00000477152 I3L4J1 428 aa7.86□□□□□ -1.15
BRCA1-214ENST00000477152 GIPC1O14908 333 aa7.86□□□□□ -1.15
BRCA1-214ENST00000477152 LRP3O75074 770 aa7.86□□□□□ -1.15
BRCA1-214ENST00000477152 ODC1P11926 461 aa7.86□□□□□ -1.15
BRCA1-214ENST00000477152 CEBPBP17676 345 aa7.86□□□□□ -1.15
BRCA1-214ENST00000477152 TYMPP19971 482 aa7.86□□□□□ -1.15
BRCA1-214ENST00000477152 LRPAP1P30533 357 aa7.86□□□□□ -1.15
BRCA1-214ENST00000477152 GDI1P31150 447 aa7.86□□□□□ -1.15
BRCA1-214ENST00000477152 UBA7P41226 1012 aa7.86□□□□□ -1.15
BRCA1-214ENST00000477152 TUFMP49411 452 aaKnown RBP7.86□□□□□ -1.15
BRCA1-214ENST00000477152 MCM2P49736 904 aa7.86□□□□□ -1.15
BRCA1-214ENST00000477152 KPNA1P52294 538 aaPredicted RBP7.86□□□□□ -1.15
BRCA1-214ENST00000477152 GPLD1P80108 840 aa7.86□□□□□ -1.15
BRCA1-214ENST00000477152 MCL1Q07820 350 aa7.86□□□□□ -1.15
BRCA1-214ENST00000477152 PRSS36Q5K4E3 855 aa7.86□□□□□ -1.15
BRCA1-214ENST00000477152 DGKKQ5KSL6 1271 aa7.86□□□□□ -1.15
BRCA1-214ENST00000477152 TANGO2Q6ICL3 276 aa7.86□□□□□ -1.15
BRCA1-214ENST00000477152 SLFN12LQ6IEE8 588 aa7.86□□□□□ -1.15
BRCA1-214ENST00000477152 FAM35AQ86V20 835 aa7.86□□□□□ -1.15
BRCA1-214ENST00000477152 MFSD6LQ8IWD5 586 aa7.86□□□□□ -1.15
BRCA1-214ENST00000477152 THEM5Q8N1Q8 247 aa7.86□□□□□ -1.15
BRCA1-214ENST00000477152 C4orf32Q8N8J7 132 aa7.86□□□□□ -1.15
BRCA1-214ENST00000477152 ZBTB44Q8NCP5 570 aa7.86□□□□□ -1.15
BRCA1-214ENST00000477152 C2orf15Q8WU43 125 aaKnown RBP7.86□□□□□ -1.15
BRCA1-214ENST00000477152 EPC1Q9H2F5 836 aa7.86□□□□□ -1.15
BRCA1-214ENST00000477152 TRPV4Q9HBA0 871 aa7.86□□□□□ -1.15
BRCA1-214ENST00000477152 HEBP1Q9NRV9 189 aa7.86□□□□□ -1.15
BRCA1-214ENST00000477152 OBP2AQ9NY56 170 aa7.86□□□□□ -1.15
BRCA1-214ENST00000477152 GGT7Q9UJ14 662 aa7.86□□□□□ -1.15
BRCA1-214ENST00000477152 TMEM238LA0A1B0GVL6 79 aa7.86□□□□□ -1.15
BRCA1-214ENST00000477152 M0QZQ0 153 aa7.86□□□□□ -1.15
BRCA1-214ENST00000477152 DTNBO60941 627 aa7.86□□□□□ -1.15
BRCA1-214ENST00000477152 OAZ2O95190 189 aa7.86□□□□□ -1.15
BRCA1-214ENST00000477152 PLA2G4BP0C869 781 aa7.86□□□□□ -1.15
BRCA1-214ENST00000477152 CXCL12P48061 93 aa7.86□□□□□ -1.15
BRCA1-214ENST00000477152 EPHA5P54756 1037 aa7.86□□□□□ -1.15
BRCA1-214ENST00000477152 RABEP1Q15276 862 aa7.86□□□□□ -1.15
BRCA1-214ENST00000477152 ARHGAP29Q52LW3 1261 aa7.86□□□□□ -1.15
BRCA1-214ENST00000477152 FAM78AQ5JUQ0 283 aa7.86□□□□□ -1.15
BRCA1-214ENST00000477152 HYIQ5T013 277 aa7.86□□□□□ -1.15
BRCA1-214ENST00000477152 LAIR1Q6GTX8 287 aa7.86□□□□□ -1.15
BRCA1-214ENST00000477152 ZSCAN18Q8TBC5 510 aaPredicted RBP7.86□□□□□ -1.15
BRCA1-214ENST00000477152 SPACA7Q96KW9 195 aa7.86□□□□□ -1.15
BRCA1-214ENST00000477152 RTKNQ9BST9 563 aa7.86□□□□□ -1.15
BRCA1-214ENST00000477152 ZNF334Q9HCZ1 680 aaPredicted RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms