RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 ASB7Q9H672 318 aa12.25□□□□□ -0.45
BRCA1-213ENST00000476777 TRPC7Q9HCX4 862 aa12.25□□□□□ -0.45
BRCA1-213ENST00000476777 DPP3Q9NY33 737 aa12.25□□□□□ -0.45
BRCA1-213ENST00000476777 LARSQ9P2J5 1176 aaKnown RBP12.25□□□□□ -0.45
BRCA1-213ENST00000476777 UXTQ9UBK9 157 aaPredicted RBP12.25□□□□□ -0.45
BRCA1-213ENST00000476777 C2CD2Q9Y426 696 aa12.25□□□□□ -0.45
BRCA1-213ENST00000476777 ADAMTS20P59510 1910 aa12.25□□□□□ -0.45
BRCA1-213ENST00000476777 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.24□□□□□ -0.45
BRCA1-213ENST00000476777 TRAV19A0A0A6YYK7 116 aa12.24□□□□□ -0.45
BRCA1-213ENST00000476777 LAD1O00515 517 aa12.24□□□□□ -0.45
BRCA1-213ENST00000476777 NOL4O94818 638 aa12.24□□□□□ -0.45
BRCA1-213ENST00000476777 CKMP06732 381 aa12.24□□□□□ -0.45
BRCA1-213ENST00000476777 USP17L7P0C7H9 530 aa12.24□□□□□ -0.45
BRCA1-213ENST00000476777 PLA2G4BP0C869 781 aa12.24□□□□□ -0.45
BRCA1-213ENST00000476777 CHRM1P11229 460 aaPredicted RBP12.24□□□□□ -0.45
BRCA1-213ENST00000476777 P2RY2P41231 377 aa12.24□□□□□ -0.45
BRCA1-213ENST00000476777 PTGER3P43115 390 aa12.24□□□□□ -0.45
BRCA1-213ENST00000476777 NEK4P51957 841 aa12.24□□□□□ -0.45
BRCA1-213ENST00000476777 TSPY1Q01534 308 aa12.24□□□□□ -0.45
BRCA1-213ENST00000476777 SEMA3BQ13214 749 aa12.24□□□□□ -0.45
BRCA1-213ENST00000476777 GNL2Q13823 731 aaKnown RBP12.24□□□□□ -0.45
BRCA1-213ENST00000476777 NFE2Q16621 373 aaPredicted RBP12.24□□□□□ -0.45
BRCA1-213ENST00000476777 GAB4Q2WGN9 574 aa12.24□□□□□ -0.45
BRCA1-213ENST00000476777 ZC2HC1CQ53FD0 456 aaPredicted RBP12.24□□□□□ -0.45
BRCA1-213ENST00000476777 SLC23A3Q6PIS1 610 aa12.24□□□□□ -0.45
BRCA1-213ENST00000476777 TMEM92Q6UXU6 159 aa12.24□□□□□ -0.45
BRCA1-213ENST00000476777 DTHD1Q6ZMT9 781 aa12.24□□□□□ -0.45
BRCA1-213ENST00000476777 ARMCX6Q7L4S7 300 aa12.24□□□□□ -0.45
BRCA1-213ENST00000476777 LPCAT2Q7L5N7 544 aa12.24□□□□□ -0.45
BRCA1-213ENST00000476777 PROSER1Q86XN7 944 aa12.24□□□□□ -0.45
BRCA1-213ENST00000476777 SYT12Q8IV01 421 aa12.24□□□□□ -0.45
BRCA1-213ENST00000476777 TMEFF1Q8IYR6 380 aa12.24□□□□□ -0.45
BRCA1-213ENST00000476777 FRMD1Q8N878 549 aa12.24□□□□□ -0.45
BRCA1-213ENST00000476777 ARL14EPQ8N8R7 260 aaPredicted RBP12.24□□□□□ -0.45
BRCA1-213ENST00000476777 SH3RF2Q8TEC5 729 aa12.24□□□□□ -0.45
BRCA1-213ENST00000476777 LRRC15Q8TF66 581 aa12.24□□□□□ -0.45
BRCA1-213ENST00000476777 LEO1Q8WVC0 666 aaPredicted RBP12.24□□□□□ -0.45
BRCA1-213ENST00000476777 PLIN2Q99541 437 aa12.24□□□□□ -0.45
BRCA1-213ENST00000476777 GCNT4Q9P109 453 aa12.24□□□□□ -0.45
BRCA1-213ENST00000476777 MBD1Q9UIS9 605 aaPredicted RBP12.24□□□□□ -0.45
BRCA1-213ENST00000476777 TNRC6BQ9UPQ9 1833 aaKnown RBP12.24□□□□□ -0.45
BRCA1-213ENST00000476777 C2orf78A6NCI8 922 aa12.23□□□□□ -0.45
BRCA1-213ENST00000476777 KPNA7A9QM74 516 aa12.23□□□□□ -0.45
BRCA1-213ENST00000476777 ALDH1A2O94788 518 aa12.23□□□□□ -0.45
BRCA1-213ENST00000476777 TCF3P15923 654 aa12.23□□□□□ -0.45
BRCA1-213ENST00000476777 SCP2P22307 547 aa12.23□□□□□ -0.45
BRCA1-213ENST00000476777 CYP2F1P24903 491 aa12.23□□□□□ -0.45
BRCA1-213ENST00000476777 ACOT2P49753 483 aa12.23□□□□□ -0.45
BRCA1-213ENST00000476777 RPL10AP62906 217 aaKnown RBP12.23□□□□□ -0.45
BRCA1-213ENST00000476777 FAM193AP78312 1265 aa12.23□□□□□ -0.45
BRCA1-213ENST00000476777 TTC30AQ86WT1 665 aa12.23□□□□□ -0.45
BRCA1-213ENST00000476777 SFTPA1Q8IWL2 248 aa12.23□□□□□ -0.45
BRCA1-213ENST00000476777 KCTD17Q8N5Z5 321 aa12.23□□□□□ -0.45
BRCA1-213ENST00000476777 ABCB6Q9NP58 842 aa12.23□□□□□ -0.45
BRCA1-213ENST00000476777 PILRBQ9UKJ0 227 aa12.23□□□□□ -0.45
BRCA1-213ENST00000476777 ARHGAP26Q9UNA1 814 aa12.23□□□□□ -0.45
BRCA1-213ENST00000476777 GPSM3Q9Y4H4 160 aa12.23□□□□□ -0.45
BRCA1-213ENST00000476777 ADAMTS9Q9P2N4 1935 aa12.23□□□□□ -0.45
BRCA1-213ENST00000476777 PLXND1Q9Y4D7 1925 aa12.23□□□□□ -0.45
BRCA1-213ENST00000476777 CFAP46Q8IYW2 2715 aa12.22□□□□□ -0.45
BRCA1-213ENST00000476777 H0Y626 953 aa12.22□□□□□ -0.45
BRCA1-213ENST00000476777 K7ENM7 598 aa12.22□□□□□ -0.45
BRCA1-213ENST00000476777 MAP3K13O43283 966 aa12.22□□□□□ -0.45
BRCA1-213ENST00000476777 TRIM16O95361 564 aa12.22□□□□□ -0.45
BRCA1-213ENST00000476777 NFATC1O95644 943 aa12.22□□□□□ -0.45
BRCA1-213ENST00000476777 HDCP19113 662 aa12.22□□□□□ -0.45
BRCA1-213ENST00000476777 ITPKAP23677 461 aa12.22□□□□□ -0.45
BRCA1-213ENST00000476777 ZNF131P52739 623 aa12.22□□□□□ -0.45
BRCA1-213ENST00000476777 MRPS21P82921 87 aaKnown RBP12.22□□□□□ -0.45
BRCA1-213ENST00000476777 ZXDBP98169 803 aa12.22□□□□□ -0.45
BRCA1-213ENST00000476777 MESP2Q0VG99 397 aa12.22□□□□□ -0.45
BRCA1-213ENST00000476777 MAP7D1Q3KQU3 841 aa12.22□□□□□ -0.45
BRCA1-213ENST00000476777 TMEM119Q4V9L6 283 aa12.22□□□□□ -0.45
BRCA1-213ENST00000476777 SOWAHCQ53LP3 525 aaPredicted RBP12.22□□□□□ -0.45
BRCA1-213ENST00000476777 SPDYCQ5MJ68 293 aa12.22□□□□□ -0.45
BRCA1-213ENST00000476777 PEAR1Q5VY43 1037 aaPredicted RBP12.22□□□□□ -0.45
BRCA1-213ENST00000476777 LYSMD4Q5XG99 296 aa12.22□□□□□ -0.45
BRCA1-213ENST00000476777 CCDC83Q8IWF9 413 aa12.22□□□□□ -0.45
BRCA1-213ENST00000476777 PDCL2Q8N4E4 241 aa12.22□□□□□ -0.45
BRCA1-213ENST00000476777 CHCHD4Q8N4Q1 142 aa12.22□□□□□ -0.45
BRCA1-213ENST00000476777 ALLCQ8N6M5 410 aa12.22□□□□□ -0.45
BRCA1-213ENST00000476777 IL17RCQ8NAC3 791 aa12.22□□□□□ -0.45
BRCA1-213ENST00000476777 TXNDC5Q8NBS9 432 aaKnown RBP12.22□□□□□ -0.45
BRCA1-213ENST00000476777 WHAMMQ8TF30 809 aa12.22□□□□□ -0.45
BRCA1-213ENST00000476777 SPACA7Q96KW9 195 aa12.22□□□□□ -0.45
BRCA1-213ENST00000476777 PKMYT1Q99640 499 aa12.22□□□□□ -0.45
BRCA1-213ENST00000476777 ACBD6Q9BR61 282 aa12.22□□□□□ -0.45
BRCA1-213ENST00000476777 REEP2Q9BRK0 252 aa12.22□□□□□ -0.45
BRCA1-213ENST00000476777 LLPHQ9BRT6 129 aaKnown RBP12.22□□□□□ -0.45
BRCA1-213ENST00000476777 FSCN3Q9NQT6 498 aa12.22□□□□□ -0.45
BRCA1-213ENST00000476777 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.22□□□□□ -0.45
BRCA1-213ENST00000476777 ODF2LQ9ULJ1 636 aa12.22□□□□□ -0.45
BRCA1-213ENST00000476777 CIZ1Q9ULV3 898 aaPredicted RBP12.22□□□□□ -0.45
BRCA1-213ENST00000476777 NAV2Q8IVL1 2488 aa12.22□□□□□ -0.45
BRCA1-213ENST00000476777 ATXN2Q99700 1313 aaKnown RBP12.21□□□□□ -0.45
BRCA1-213ENST00000476777 TISP43B9A030 160 aa12.21□□□□□ -0.45
BRCA1-213ENST00000476777 ANKRD63C9JTQ0 380 aa12.21□□□□□ -0.45
BRCA1-213ENST00000476777 SGK1O00141 431 aa12.21□□□□□ -0.45
BRCA1-213ENST00000476777 KLF8O95600 359 aaPredicted RBP12.21□□□□□ -0.45
BRCA1-213ENST00000476777 HOXD12P35452 270 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms