RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 PLA2G2CQ5R387 149 aa14.05□□□□□ -0.16
MRPL55-228ENST00000476267 KBTBD6Q86V97 674 aa14.05□□□□□ -0.16
MRPL55-228ENST00000476267 SPATA2LQ8IUW3 424 aaPredicted RBP14.05□□□□□ -0.16
MRPL55-228ENST00000476267 CAMKK1Q8N5S9 505 aa14.05□□□□□ -0.16
MRPL55-228ENST00000476267 HPS3Q969F9 1004 aa14.05□□□□□ -0.16
MRPL55-228ENST00000476267 MYLPFQ96A32 169 aa14.05□□□□□ -0.16
MRPL55-228ENST00000476267 ZC3H10Q96K80 434 aaKnown RBP14.05□□□□□ -0.16
MRPL55-228ENST00000476267 SPATA17Q96L03 361 aa14.05□□□□□ -0.16
MRPL55-228ENST00000476267 P2RY13Q9BPV8 354 aa14.05□□□□□ -0.16
MRPL55-228ENST00000476267 TNMDQ9H2S6 317 aa14.05□□□□□ -0.16
MRPL55-228ENST00000476267 TRAV19A0A0A6YYK7 116 aa14.04□□□□□ -0.16
MRPL55-228ENST00000476267 TM4SF5O14894 197 aa14.04□□□□□ -0.16
MRPL55-228ENST00000476267 TGFB1I1O43294 461 aa14.04□□□□□ -0.16
MRPL55-228ENST00000476267 WARSP23381 471 aaKnown RBP14.04□□□□□ -0.16
MRPL55-228ENST00000476267 USP46P62068 366 aa14.04□□□□□ -0.16
MRPL55-228ENST00000476267 PSMC1P62191 440 aaKnown RBP14.04□□□□□ -0.16
MRPL55-228ENST00000476267 AMPD2Q01433 879 aa14.04□□□□□ -0.16
MRPL55-228ENST00000476267 EHHADHQ08426 723 aa14.04□□□□□ -0.16
MRPL55-228ENST00000476267 GAB4Q2WGN9 574 aa14.04□□□□□ -0.16
MRPL55-228ENST00000476267 FBXO43Q4G163 708 aa14.04□□□□□ -0.16
MRPL55-228ENST00000476267 PPM1JQ5JR12 505 aa14.04□□□□□ -0.16
MRPL55-228ENST00000476267 CC2D1AQ6P1N0 951 aaPredicted RBP14.04□□□□□ -0.16
MRPL55-228ENST00000476267 CNNM4Q6P4Q7 775 aa14.04□□□□□ -0.16
MRPL55-228ENST00000476267 CEP68Q76N32 757 aa14.04□□□□□ -0.16
MRPL55-228ENST00000476267 SYT13Q7L8C5 426 aa14.04□□□□□ -0.16
MRPL55-228ENST00000476267 CACNA2D4Q7Z3S7 1137 aa14.04□□□□□ -0.16
MRPL55-228ENST00000476267 WDR49Q8IV35 697 aa14.04□□□□□ -0.16
MRPL55-228ENST00000476267 CCDC65Q8IXS2 484 aa14.04□□□□□ -0.16
MRPL55-228ENST00000476267 CPA6Q8N4T0 437 aa14.04□□□□□ -0.16
MRPL55-228ENST00000476267 PDILTQ8N807 584 aa14.04□□□□□ -0.16
MRPL55-228ENST00000476267 ARL14EPQ8N8R7 260 aaPredicted RBP14.04□□□□□ -0.16
MRPL55-228ENST00000476267 LINC00301Q8NCQ3 95 aa14.04□□□□□ -0.16
MRPL55-228ENST00000476267 HPDLQ96IR7 371 aa14.04□□□□□ -0.16
MRPL55-228ENST00000476267 ANKRD36BP1Q96IX9 119 aa14.04□□□□□ -0.16
MRPL55-228ENST00000476267 CEP295NLQ96MC4 621 aa14.04□□□□□ -0.16
MRPL55-228ENST00000476267 SYT15Q9BQS2 421 aa14.04□□□□□ -0.16
MRPL55-228ENST00000476267 TTLL2Q9BWV7 592 aa14.04□□□□□ -0.16
MRPL55-228ENST00000476267 TRIM9Q9C026 710 aa14.04□□□□□ -0.16
MRPL55-228ENST00000476267 GZF1Q9H116 711 aaPredicted RBP14.04□□□□□ -0.16
MRPL55-228ENST00000476267 TRPC7Q9HCX4 862 aa14.04□□□□□ -0.16
MRPL55-228ENST00000476267 RXFP3Q9NSD7 469 aa14.04□□□□□ -0.16
MRPL55-228ENST00000476267 DUS2Q9NX74 493 aaKnown RBP14.04□□□□□ -0.16
MRPL55-228ENST00000476267 HSPBP1Q9NZL4 362 aa14.04□□□□□ -0.16
MRPL55-228ENST00000476267 CDH9Q9ULB4 789 aa14.04□□□□□ -0.16
MRPL55-228ENST00000476267 ARHGAP26Q9UNA1 814 aa14.04□□□□□ -0.16
MRPL55-228ENST00000476267 WNT6Q9Y6F9 365 aa14.04□□□□□ -0.16
MRPL55-228ENST00000476267 ZNF233A6NK53 670 aa14.03□□□□□ -0.16
MRPL55-228ENST00000476267 EIF3DO15371 548 aaKnown RBP eCLIP14.03□□□□□ -0.16
MRPL55-228ENST00000476267 OLFM2O95897 454 aa14.03□□□□□ -0.16
MRPL55-228ENST00000476267 CKMP06732 381 aa14.03□□□□□ -0.16
MRPL55-228ENST00000476267 ZNF806P0C7X5 589 aa14.03□□□□□ -0.16
MRPL55-228ENST00000476267 CHRM1P11229 460 aaPredicted RBP14.03□□□□□ -0.16
MRPL55-228ENST00000476267 MYO1EQ12965 1108 aa14.03□□□□□ -0.16
MRPL55-228ENST00000476267 SF3A2Q15428 464 aaKnown RBP14.03□□□□□ -0.16
MRPL55-228ENST00000476267 SURF1Q15526 300 aa14.03□□□□□ -0.16
MRPL55-228ENST00000476267 VSTM1Q6UX27 236 aa14.03□□□□□ -0.16
MRPL55-228ENST00000476267 C4orf50Q6ZRC1 276 aa14.03□□□□□ -0.16
MRPL55-228ENST00000476267 RPLP0P6Q8NHW5 317 aa14.03□□□□□ -0.16
MRPL55-228ENST00000476267 ZNF507Q8TCN5 953 aa14.03□□□□□ -0.16
MRPL55-228ENST00000476267 CD101Q93033 1021 aa14.03□□□□□ -0.16
MRPL55-228ENST00000476267 ATP2A3Q93084 1043 aa14.03□□□□□ -0.16
MRPL55-228ENST00000476267 HHIPQ96QV1 700 aa14.03□□□□□ -0.16
MRPL55-228ENST00000476267 ARRDC1-AS1Q9H2J1 176 aa14.03□□□□□ -0.16
MRPL55-228ENST00000476267 ZSCAN16Q9H4T2 348 aaPredicted RBP14.03□□□□□ -0.16
MRPL55-228ENST00000476267 TMEM30AQ9NV96 361 aa14.03□□□□□ -0.16
MRPL55-228ENST00000476267 EBF1Q9UH73 591 aa14.03□□□□□ -0.16
MRPL55-228ENST00000476267 SLC8A2Q9UPR5 921 aa14.03□□□□□ -0.16
MRPL55-228ENST00000476267 AXIN1O15169 862 aa14.02□□□□□ -0.17
MRPL55-228ENST00000476267 PPP6R2O75170 966 aa14.02□□□□□ -0.17
MRPL55-228ENST00000476267 CST3P01034 146 aaPredicted RBP14.02□□□□□ -0.17
MRPL55-228ENST00000476267 TNNC2P02585 160 aa14.02□□□□□ -0.17
MRPL55-228ENST00000476267 CENPBP07199 599 aaPredicted RBP14.02□□□□□ -0.17
MRPL55-228ENST00000476267 PFKLP17858 780 aa14.02□□□□□ -0.17
MRPL55-228ENST00000476267 BDNFP23560 247 aa14.02□□□□□ -0.17
MRPL55-228ENST00000476267 OPRD1P41143 372 aa14.02□□□□□ -0.17
MRPL55-228ENST00000476267 CCDC6Q16204 474 aa14.02□□□□□ -0.17
MRPL55-228ENST00000476267 DUOXA2Q1HG44 320 aa14.02□□□□□ -0.17
MRPL55-228ENST00000476267 PLK5Q496M5 336 aa14.02□□□□□ -0.17
MRPL55-228ENST00000476267 DENND5BQ6ZUT9 1274 aa14.02□□□□□ -0.17
MRPL55-228ENST00000476267 TRAPPC11Q7Z392 1133 aa14.02□□□□□ -0.17
MRPL55-228ENST00000476267 SCN4BQ8IWT1 228 aa14.02□□□□□ -0.17
MRPL55-228ENST00000476267 FSIP1Q8NA03 581 aa14.02□□□□□ -0.17
MRPL55-228ENST00000476267 MYCBPAPQ8TBZ2 947 aa14.02□□□□□ -0.17
MRPL55-228ENST00000476267 SH3RF2Q8TEC5 729 aa14.02□□□□□ -0.17
MRPL55-228ENST00000476267 NOC3LQ8WTT2 800 aaKnown RBP14.02□□□□□ -0.17
MRPL55-228ENST00000476267 PCED1BQ96HM7 432 aa14.02□□□□□ -0.17
MRPL55-228ENST00000476267 DUSP15Q9H1R2 295 aaPredicted RBP14.02□□□□□ -0.17
MRPL55-228ENST00000476267 LINC00597Q9H2U6 94 aa14.02□□□□□ -0.17
MRPL55-228ENST00000476267 CUEDC2Q9H467 287 aa14.02□□□□□ -0.17
MRPL55-228ENST00000476267 AGPAT3Q9NRZ7 376 aa14.02□□□□□ -0.17
MRPL55-228ENST00000476267 MAGEC2Q9UBF1 373 aaPredicted RBP14.02□□□□□ -0.17
MRPL55-228ENST00000476267 PCDHGA5Q9Y5G8 931 aa14.02□□□□□ -0.17
MRPL55-228ENST00000476267 ANTXRLA6NF34 631 aa14.01□□□□□ -0.17
MRPL55-228ENST00000476267 STX6O43752 255 aa14.01□□□□□ -0.17
MRPL55-228ENST00000476267 TACC1O75410 805 aa14.01□□□□□ -0.17
MRPL55-228ENST00000476267 IFNAR2P48551 515 aa14.01□□□□□ -0.17
MRPL55-228ENST00000476267 CACNA2D1P54289 1103 aa14.01□□□□□ -0.17
MRPL55-228ENST00000476267 NOP14P78316 857 aaKnown RBP14.01□□□□□ -0.17
MRPL55-228ENST00000476267 MAPRE1Q15691 268 aaKnown RBP14.01□□□□□ -0.17
MRPL55-228ENST00000476267 SNRNP35Q16560 246 aaKnown RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms