RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 SLC39A2Q9NP94 309 aa7.52□□□□□ -1.21
HDAC3-207ENST00000475549 THG1LQ9NWX6 298 aaKnown RBP7.52□□□□□ -1.21
HDAC3-207ENST00000475549 NCDNQ9UBB6 729 aa7.52□□□□□ -1.21
HDAC3-207ENST00000475549 FARP1Q9Y4F1 1045 aaPredicted RBP7.52□□□□□ -1.21
HDAC3-207ENST00000475549 CEP250Q9BV73 2442 aa7.52□□□□□ -1.21
HDAC3-207ENST00000475549 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.51□□□□□ -1.21
HDAC3-207ENST00000475549 ZNF840PA6NDX5 716 aa7.51□□□□□ -1.21
HDAC3-207ENST00000475549 KLRC4O43908 158 aa7.51□□□□□ -1.21
HDAC3-207ENST00000475549 TACC1O75410 805 aa7.51□□□□□ -1.21
HDAC3-207ENST00000475549 F13A1P00488 732 aa7.51□□□□□ -1.21
HDAC3-207ENST00000475549 EGFP01133 1207 aa7.51□□□□□ -1.21
HDAC3-207ENST00000475549 ZSCAN22P10073 491 aaPredicted RBP7.51□□□□□ -1.21
HDAC3-207ENST00000475549 HDCP19113 662 aa7.51□□□□□ -1.21
HDAC3-207ENST00000475549 BDNFP23560 247 aa7.51□□□□□ -1.21
HDAC3-207ENST00000475549 DDX6P26196 483 aaKnown RBP eCLIP7.51□□□□□ -1.21
HDAC3-207ENST00000475549 PCSK1P29120 753 aa7.51□□□□□ -1.21
HDAC3-207ENST00000475549 GJA4P35212 333 aa7.51□□□□□ -1.21
HDAC3-207ENST00000475549 GNL1P36915 607 aaPredicted RBP7.51□□□□□ -1.21
HDAC3-207ENST00000475549 AFMP43652 599 aa7.51□□□□□ -1.21
HDAC3-207ENST00000475549 MYL6P60660 151 aa7.51□□□□□ -1.21
HDAC3-207ENST00000475549 AMPD3Q01432 767 aa7.51□□□□□ -1.21
HDAC3-207ENST00000475549 FAM160A1Q05DH4 1040 aa7.51□□□□□ -1.21
HDAC3-207ENST00000475549 CYP24A1Q07973 514 aa7.51□□□□□ -1.21
HDAC3-207ENST00000475549 SPEM2Q0P670 501 aa7.51□□□□□ -1.21
HDAC3-207ENST00000475549 MYO1EQ12965 1108 aa7.51□□□□□ -1.21
HDAC3-207ENST00000475549 STK4Q13043 487 aa7.51□□□□□ -1.21
HDAC3-207ENST00000475549 SIM2Q14190 667 aaPredicted RBP7.51□□□□□ -1.21
HDAC3-207ENST00000475549 PSMD6Q15008 389 aa7.51□□□□□ -1.21
HDAC3-207ENST00000475549 ZNF77Q15935 545 aa7.51□□□□□ -1.21
HDAC3-207ENST00000475549 KNOP1Q1ED39 458 aaKnown RBP7.51□□□□□ -1.21
HDAC3-207ENST00000475549 GAB4Q2WGN9 574 aa7.51□□□□□ -1.21
HDAC3-207ENST00000475549 EML3Q32P44 896 aa7.51□□□□□ -1.21
HDAC3-207ENST00000475549 WDR72Q3MJ13 1102 aa7.51□□□□□ -1.21
HDAC3-207ENST00000475549 RESP18Q5W5W9 173 aa7.51□□□□□ -1.21
HDAC3-207ENST00000475549 PAQR9Q6ZVX9 377 aa7.51□□□□□ -1.21
HDAC3-207ENST00000475549 DGLUCYQ7Z3D6 616 aa7.51□□□□□ -1.21
HDAC3-207ENST00000475549 LONP2Q86WA8 852 aa7.51□□□□□ -1.21
HDAC3-207ENST00000475549 SYNPOQ8N3V7 929 aa7.51□□□□□ -1.21
HDAC3-207ENST00000475549 XXYLT1Q8NBI6 393 aa7.51□□□□□ -1.21
HDAC3-207ENST00000475549 SPRYD3Q8NCJ5 442 aa7.51□□□□□ -1.21
HDAC3-207ENST00000475549 OSCP1Q8WVF1 389 aa7.51□□□□□ -1.21
HDAC3-207ENST00000475549 MRPS31Q92665 395 aaKnown RBP7.51□□□□□ -1.21
HDAC3-207ENST00000475549 PAGE5Q96GU1 130 aa7.51□□□□□ -1.21
HDAC3-207ENST00000475549 FUBP3Q96I24 572 aaKnown RBP eCLIP7.51□□□□□ -1.21
HDAC3-207ENST00000475549 ANKRD36BP1Q96IX9 119 aa7.51□□□□□ -1.21
HDAC3-207ENST00000475549 SPATA17Q96L03 361 aa7.51□□□□□ -1.21
HDAC3-207ENST00000475549 GCNAQ96QF7 691 aa7.51□□□□□ -1.21
HDAC3-207ENST00000475549 MMS19Q96T76 1030 aa7.51□□□□□ -1.21
HDAC3-207ENST00000475549 LRRC27Q9C0I9 530 aa7.51□□□□□ -1.21
HDAC3-207ENST00000475549 CUEDC2Q9H467 287 aa7.51□□□□□ -1.21
HDAC3-207ENST00000475549 ECT2Q9H8V3 914 aa7.51□□□□□ -1.21
HDAC3-207ENST00000475549 KIAA1586Q9HCI6 787 aa7.51□□□□□ -1.21
HDAC3-207ENST00000475549 TRPC7Q9HCX4 862 aa7.51□□□□□ -1.21
HDAC3-207ENST00000475549 MAGEC2Q9UBF1 373 aaPredicted RBP7.51□□□□□ -1.21
HDAC3-207ENST00000475549 ZMYM5Q9UJ78 669 aa7.51□□□□□ -1.21
HDAC3-207ENST00000475549 RCOR1Q9UKL0 485 aa7.51□□□□□ -1.21
HDAC3-207ENST00000475549 CDH9Q9ULB4 789 aa7.51□□□□□ -1.21
HDAC3-207ENST00000475549 ZDHHC9Q9Y397 364 aa7.51□□□□□ -1.21
HDAC3-207ENST00000475549 WNT6Q9Y6F9 365 aa7.51□□□□□ -1.21
HDAC3-207ENST00000475549 PDCD11Q14690 1871 aaKnown RBP7.51□□□□□ -1.21
HDAC3-207ENST00000475549 CITO14578 2027 aa7.51□□□□□ -1.21
HDAC3-207ENST00000475549 SCN1AP35498 2009 aa7.51□□□□□ -1.21
HDAC3-207ENST00000475549 PVALEFA0A1B0GWK0 134 aa7.5□□□□□ -1.21
HDAC3-207ENST00000475549 DCDC2BA2VCK2 349 aa7.5□□□□□ -1.21
HDAC3-207ENST00000475549 F8VP50 259 aa7.5□□□□□ -1.21
HDAC3-207ENST00000475549 ACTN4O43707 911 aaKnown RBP7.5□□□□□ -1.21
HDAC3-207ENST00000475549 VNN1O95497 513 aa7.5□□□□□ -1.21
HDAC3-207ENST00000475549 TNNC2P02585 160 aa7.5□□□□□ -1.21
HDAC3-207ENST00000475549 C4BPAP04003 597 aaKnown RBP7.5□□□□□ -1.21
HDAC3-207ENST00000475549 RETP07949 1114 aa7.5□□□□□ -1.21
HDAC3-207ENST00000475549 FAM163BP0C2L3 166 aa7.5□□□□□ -1.21
HDAC3-207ENST00000475549 CHRM1P11229 460 aaPredicted RBP7.5□□□□□ -1.21
HDAC3-207ENST00000475549 PTPN1P18031 435 aaKnown RBP7.5□□□□□ -1.21
HDAC3-207ENST00000475549 TNNI1P19237 187 aa7.5□□□□□ -1.21
HDAC3-207ENST00000475549 GRIK1P39086 918 aa7.5□□□□□ -1.21
HDAC3-207ENST00000475549 ME1P48163 572 aa7.5□□□□□ -1.21
HDAC3-207ENST00000475549 PGFP49763 221 aa7.5□□□□□ -1.21
HDAC3-207ENST00000475549 CYP2J2P51589 502 aa7.5□□□□□ -1.21
HDAC3-207ENST00000475549 CDH8P55286 799 aa7.5□□□□□ -1.21
HDAC3-207ENST00000475549 DLG4P78352 724 aa7.5□□□□□ -1.21
HDAC3-207ENST00000475549 CLDN10P78369 228 aa7.5□□□□□ -1.21
HDAC3-207ENST00000475549 CYP27A1Q02318 531 aa7.5□□□□□ -1.21
HDAC3-207ENST00000475549 MESP2Q0VG99 397 aa7.5□□□□□ -1.21
HDAC3-207ENST00000475549 GRSF1Q12849 480 aaKnown RBP eCLIP7.5□□□□□ -1.21
HDAC3-207ENST00000475549 PPP2R5DQ14738 602 aa7.5□□□□□ -1.21
HDAC3-207ENST00000475549 MTF1Q14872 753 aa7.5□□□□□ -1.21
HDAC3-207ENST00000475549 PDGFRLQ15198 375 aa7.5□□□□□ -1.21
HDAC3-207ENST00000475549 SURF1Q15526 300 aa7.5□□□□□ -1.21
HDAC3-207ENST00000475549 MDH1BQ5I0G3 518 aa7.5□□□□□ -1.21
HDAC3-207ENST00000475549 TDRD10Q5VZ19 366 aaKnown RBP7.5□□□□□ -1.21
HDAC3-207ENST00000475549 LAIR1Q6GTX8 287 aa7.5□□□□□ -1.21
HDAC3-207ENST00000475549 PRR23BQ6ZRT6 265 aa7.5□□□□□ -1.21
HDAC3-207ENST00000475549 STXBP4Q6ZWJ1 553 aa7.5□□□□□ -1.21
HDAC3-207ENST00000475549 SFTPA1Q8IWL2 248 aa7.5□□□□□ -1.21
HDAC3-207ENST00000475549 C12orf56Q8IXR9 622 aa7.5□□□□□ -1.21
HDAC3-207ENST00000475549 ADGRG2Q8IZP9 1017 aa7.5□□□□□ -1.21
HDAC3-207ENST00000475549 FAM160A2Q8N612 972 aaPredicted RBP7.5□□□□□ -1.21
HDAC3-207ENST00000475549 KIAA0895Q8NCT3 520 aa7.5□□□□□ -1.21
HDAC3-207ENST00000475549 OR6B3Q8NGW1 331 aa7.5□□□□□ -1.21
HDAC3-207ENST00000475549 SH3RF2Q8TEC5 729 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms