RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 WDR44Q5JSH3 913 aa13.64□□□□□ -0.23
CCNL1-216ENST00000475298 TMEM63BQ5T3F8 832 aa13.64□□□□□ -0.23
CCNL1-216ENST00000475298 TMEM270Q6UE05 265 aa13.64□□□□□ -0.23
CCNL1-216ENST00000475298 MARK2Q7KZI7 788 aaKnown RBP13.64□□□□□ -0.23
CCNL1-216ENST00000475298 TRMT10CQ7L0Y3 403 aaKnown RBP13.64□□□□□ -0.23
CCNL1-216ENST00000475298 SPATA24Q86W54 205 aa13.64□□□□□ -0.23
CCNL1-216ENST00000475298 OR5B17Q8NGF7 314 aa13.64□□□□□ -0.23
CCNL1-216ENST00000475298 WDR60Q8WVS4 1066 aa13.64□□□□□ -0.23
CCNL1-216ENST00000475298 C12orf42Q96LP6 360 aa13.64□□□□□ -0.23
CCNL1-216ENST00000475298 HEMGNQ9BXL5 484 aa13.64□□□□□ -0.23
CCNL1-216ENST00000475298 TSPYL2Q9H2G4 693 aaPredicted RBP13.64□□□□□ -0.23
CCNL1-216ENST00000475298 DNAJC17Q9NVM6 304 aaKnown RBP13.64□□□□□ -0.23
CCNL1-216ENST00000475298 RBAKQ9NYW8 714 aaPredicted RBP13.64□□□□□ -0.23
CCNL1-216ENST00000475298 FBXO40Q9UH90 709 aa13.64□□□□□ -0.23
CCNL1-216ENST00000475298 R3HDM2Q9Y2K5 976 aaKnown RBP13.64□□□□□ -0.23
CCNL1-216ENST00000475298 PCDHB2Q9Y5E7 798 aa13.64□□□□□ -0.23
CCNL1-216ENST00000475298 VAV1P15498 845 aa13.64□□□□□ -0.23
CCNL1-216ENST00000475298 ACO1P21399 889 aaKnown RBP13.64□□□□□ -0.23
CCNL1-216ENST00000475298 GJC1P36383 396 aa13.64□□□□□ -0.23
CCNL1-216ENST00000475298 CBX3Q13185 183 aa13.64□□□□□ -0.23
CCNL1-216ENST00000475298 PPFIBP2Q8ND30 876 aa13.64□□□□□ -0.23
CCNL1-216ENST00000475298 DEPTORQ8TB45 409 aa13.64□□□□□ -0.23
CCNL1-216ENST00000475298 SLC16A10Q8TF71 515 aa13.64□□□□□ -0.23
CCNL1-216ENST00000475298 KLRG1Q96E93 195 aa13.64□□□□□ -0.23
CCNL1-216ENST00000475298 CDHR1Q96JP9 859 aa13.64□□□□□ -0.23
CCNL1-216ENST00000475298 MIS12Q9H081 205 aa13.64□□□□□ -0.23
CCNL1-216ENST00000475298 IQCGQ9H095 443 aaKnown RBP13.64□□□□□ -0.23
CCNL1-216ENST00000475298 K7ERI5 159 aa13.63□□□□□ -0.23
CCNL1-216ENST00000475298 FSCN2O14926 492 aa13.63□□□□□ -0.23
CCNL1-216ENST00000475298 ZC3H11AO75152 810 aaKnown RBP eCLIP13.63□□□□□ -0.231e-8■■■□□ 17.1
CCNL1-216ENST00000475298 ZNF189O75820 626 aaPredicted RBP13.63□□□□□ -0.23
CCNL1-216ENST00000475298 GRIA2P42262 883 aa13.63□□□□□ -0.23
CCNL1-216ENST00000475298 NSFP46459 744 aaKnown RBP13.63□□□□□ -0.23
CCNL1-216ENST00000475298 CLDN10P78369 228 aa13.63□□□□□ -0.23
CCNL1-216ENST00000475298 HPCAP84074 193 aa13.63□□□□□ -0.23
CCNL1-216ENST00000475298 ZRSR2Q15696 482 aaKnown RBP13.63□□□□□ -0.23
CCNL1-216ENST00000475298 MON1BQ7L1V2 547 aa13.63□□□□□ -0.23
CCNL1-216ENST00000475298 ENOSF1Q7L5Y1 443 aa13.63□□□□□ -0.23
CCNL1-216ENST00000475298 RIBC1Q8N443 379 aaPredicted RBP13.63□□□□□ -0.23
CCNL1-216ENST00000475298 ZBTB8BQ8NAP8 495 aaPredicted RBP13.63□□□□□ -0.23
CCNL1-216ENST00000475298 MSTO1Q9BUK6 570 aa13.63□□□□□ -0.23
CCNL1-216ENST00000475298 PORCNQ9H237 461 aa13.63□□□□□ -0.23
CCNL1-216ENST00000475298 LRRC19Q9H756 370 aa13.63□□□□□ -0.23
CCNL1-216ENST00000475298 SYNCQ9H7C4 482 aa13.63□□□□□ -0.23
CCNL1-216ENST00000475298 GGA3Q9NZ52 723 aa13.63□□□□□ -0.23
CCNL1-216ENST00000475298 ZNF212Q9UDV6 495 aa13.63□□□□□ -0.23
CCNL1-216ENST00000475298 PCDHB4Q9Y5E5 795 aa13.63□□□□□ -0.23
CCNL1-216ENST00000475298 MAFBQ9Y5Q3 323 aaPredicted RBP13.63□□□□□ -0.23
CCNL1-216ENST00000475298 BRCA1P38398 1863 aaKnown RBP13.63□□□□□ -0.23
CCNL1-216ENST00000475298 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.63□□□□□ -0.23
CCNL1-216ENST00000475298 GSC2O15499 205 aa13.63□□□□□ -0.23
CCNL1-216ENST00000475298 CHKAP35790 457 aa13.63□□□□□ -0.23
CCNL1-216ENST00000475298 VPS41P49754 854 aa13.63□□□□□ -0.23
CCNL1-216ENST00000475298 SULT2A1Q06520 285 aa13.63□□□□□ -0.23
CCNL1-216ENST00000475298 CUL2Q13617 745 aa13.63□□□□□ -0.23
CCNL1-216ENST00000475298 STXBP2Q15833 593 aa13.63□□□□□ -0.23
CCNL1-216ENST00000475298 EEPD1Q7L9B9 569 aa13.63□□□□□ -0.23
CCNL1-216ENST00000475298 SRRM1Q8IYB3 904 aaKnown RBP13.63□□□□□ -0.23
CCNL1-216ENST00000475298 ANKRD35Q8N283 1001 aa13.63□□□□□ -0.23
CCNL1-216ENST00000475298 C12orf50Q8NA57 414 aaPredicted RBP13.63□□□□□ -0.23
CCNL1-216ENST00000475298 PWWP2AQ96N64 755 aa13.63□□□□□ -0.23
CCNL1-216ENST00000475298 DHX33Q9H6R0 707 aaKnown RBP13.63□□□□□ -0.23
CCNL1-216ENST00000475298 NKIRAS1Q9NYS0 192 aa13.63□□□□□ -0.23
CCNL1-216ENST00000475298 TUBGCP4Q9UGJ1 667 aa13.63□□□□□ -0.23
CCNL1-216ENST00000475298 NUB1Q9Y5A7 615 aa13.63□□□□□ -0.23
CCNL1-216ENST00000475298 SSC5DA1L4H1 1573 aa13.62□□□□□ -0.23
CCNL1-216ENST00000475298 C19orf81C9J6K1 198 aa13.62□□□□□ -0.23
CCNL1-216ENST00000475298 FZD9O00144 591 aa13.62□□□□□ -0.23
CCNL1-216ENST00000475298 ATP2A1O14983 1001 aa13.62□□□□□ -0.23
CCNL1-216ENST00000475298 RNASEH1O60930 286 aaKnown RBP13.62□□□□□ -0.23
CCNL1-216ENST00000475298 ASMTLO95671 621 aa13.62□□□□□ -0.23
CCNL1-216ENST00000475298 FUT4P22083 530 aa13.62□□□□□ -0.23
CCNL1-216ENST00000475298 GNA15P30679 374 aa13.62□□□□□ -0.23
CCNL1-216ENST00000475298 TAS2R40P59535 323 aa13.62□□□□□ -0.23
CCNL1-216ENST00000475298 IL9RQ01113 521 aa13.62□□□□□ -0.23
CCNL1-216ENST00000475298 CENPCQ03188 943 aa13.62□□□□□ -0.23
CCNL1-216ENST00000475298 SH2D4BQ5SQS7 431 aa13.62□□□□□ -0.23
CCNL1-216ENST00000475298 TREML2Q5T2D2 321 aa13.62□□□□□ -0.23
CCNL1-216ENST00000475298 PPP1R21Q6ZMI0 780 aa13.62□□□□□ -0.23
CCNL1-216ENST00000475298 ANKS1BQ7Z6G8 1248 aa13.62□□□□□ -0.23
CCNL1-216ENST00000475298 DDX27Q96GQ7 796 aaKnown RBP13.62□□□□□ -0.23
CCNL1-216ENST00000475298 OLFM3Q96PB7 478 aa13.62□□□□□ -0.23
CCNL1-216ENST00000475298 PCYT2Q99447 389 aa13.62□□□□□ -0.23
CCNL1-216ENST00000475298 R3HDMLQ9H3Y0 253 aa13.62□□□□□ -0.23
CCNL1-216ENST00000475298 KLHL11Q9NVR0 708 aa13.62□□□□□ -0.23
CCNL1-216ENST00000475298 ASIC3Q9UHC3 531 aa13.62□□□□□ -0.23
CCNL1-216ENST00000475298 USTQ9Y2C2 406 aa13.62□□□□□ -0.23
CCNL1-216ENST00000475298 STYXL1Q9Y6J8 313 aa13.62□□□□□ -0.23
CCNL1-216ENST00000475298 UBA1P22314 1058 aaKnown RBP13.61□□□□□ -0.23
CCNL1-216ENST00000475298 ARL2P36404 184 aa13.61□□□□□ -0.23
CCNL1-216ENST00000475298 TNFSF9P41273 254 aa13.61□□□□□ -0.23
CCNL1-216ENST00000475298 OLFML2BQ68BL8 750 aa13.61□□□□□ -0.23
CCNL1-216ENST00000475298 CLNKQ7Z7G1 428 aa13.61□□□□□ -0.23
CCNL1-216ENST00000475298 PRUNE1Q86TP1 453 aa13.61□□□□□ -0.23
CCNL1-216ENST00000475298 SLC7A3Q8WY07 619 aa13.61□□□□□ -0.23
CCNL1-216ENST00000475298 MPP4Q96JB8 637 aa13.61□□□□□ -0.23
CCNL1-216ENST00000475298 BTBD10Q9BSF8 475 aa13.61□□□□□ -0.23
CCNL1-216ENST00000475298 CYLDQ9NQC7 956 aa13.61□□□□□ -0.23
CCNL1-216ENST00000475298 AVENQ9NQS1 362 aaPredicted RBP13.61□□□□□ -0.23
CCNL1-216ENST00000475298 SAR1AQ9NR31 198 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms