RNA–Protein interactions for RNA: ENST00000475195.5

ATG4B-216, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 762 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-216ENST00000475195 ERCC5P28715 1186 aaPredicted RBP17.52■□□□□ 0.4
ATG4B-216ENST00000475195 GRIK1P39086 918 aa17.52■□□□□ 0.4
ATG4B-216ENST00000475195 GPC5P78333 572 aa17.52■□□□□ 0.4
ATG4B-216ENST00000475195 TAF12Q16514 161 aa17.52■□□□□ 0.4
ATG4B-216ENST00000475195 CCDC40Q4G0X9 1142 aa17.52■□□□□ 0.4
ATG4B-216ENST00000475195 WDR44Q5JSH3 913 aa17.52■□□□□ 0.4
ATG4B-216ENST00000475195 ACOT1Q86TX2 421 aa17.52■□□□□ 0.4
ATG4B-216ENST00000475195 IRF2BP1Q8IU81 584 aa17.52■□□□□ 0.4
ATG4B-216ENST00000475195 SCN4BQ8IWT1 228 aa17.52■□□□□ 0.4
ATG4B-216ENST00000475195 FUKQ8N0W3 1084 aa17.52■□□□□ 0.4
ATG4B-216ENST00000475195 ST13P5Q8NFI4 369 aaPredicted RBP17.52■□□□□ 0.4
ATG4B-216ENST00000475195 LMO3Q8TAP4 145 aa17.52■□□□□ 0.4
ATG4B-216ENST00000475195 PBXIP1Q96AQ6 731 aa17.52■□□□□ 0.4
ATG4B-216ENST00000475195 E2F7Q96AV8 911 aa17.52■□□□□ 0.4
ATG4B-216ENST00000475195 TTLL2Q9BWV7 592 aa17.52■□□□□ 0.4
ATG4B-216ENST00000475195 NT5C1AQ9BXI3 368 aa17.52■□□□□ 0.4
ATG4B-216ENST00000475195 SLC46A2Q9BY10 475 aa17.52■□□□□ 0.4
ATG4B-216ENST00000475195 ZNF518BQ9C0D4 1074 aa17.52■□□□□ 0.4
ATG4B-216ENST00000475195 HMGXB4Q9UGU5 601 aa17.52■□□□□ 0.4
ATG4B-216ENST00000475195 CLDN5O00501 218 aa17.51■□□□□ 0.39
ATG4B-216ENST00000475195 CACNA2D1P54289 1103 aa17.51■□□□□ 0.39
ATG4B-216ENST00000475195 KCNH2Q12809 1159 aa17.51■□□□□ 0.39
ATG4B-216ENST00000475195 ARHGAP15Q53QZ3 475 aa17.51■□□□□ 0.39
ATG4B-216ENST00000475195 STXBP5Q5T5C0 1151 aa17.51■□□□□ 0.39
ATG4B-216ENST00000475195 DENND5BQ6ZUT9 1274 aa17.51■□□□□ 0.39
ATG4B-216ENST00000475195 ARID3BQ8IVW6 561 aaPredicted RBP17.51■□□□□ 0.39
ATG4B-216ENST00000475195 TWNKQ96RR1 684 aa17.51■□□□□ 0.39
ATG4B-216ENST00000475195 CSNK1G1Q9HCP0 422 aa17.51■□□□□ 0.39
ATG4B-216ENST00000475195 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.51■□□□□ 0.392e-6■■■■■ 96.1
ATG4B-216ENST00000475195 OBP2AQ9NY56 170 aa17.51■□□□□ 0.39
ATG4B-216ENST00000475195 IL37Q9NZH6 218 aa17.51■□□□□ 0.39
ATG4B-216ENST00000475195 F8VP50 259 aa17.5■□□□□ 0.39
ATG4B-216ENST00000475195 TADA3O75528 432 aa17.5■□□□□ 0.39
ATG4B-216ENST00000475195 CCDC192P0DO97 292 aa17.5■□□□□ 0.39
ATG4B-216ENST00000475195 DDX6P26196 483 aaKnown RBP eCLIP17.5■□□□□ 0.39
ATG4B-216ENST00000475195 DPCR1Q3MIW9 517 aa17.5■□□□□ 0.39
ATG4B-216ENST00000475195 GPR158Q5T848 1215 aa17.5■□□□□ 0.39
ATG4B-216ENST00000475195 VITQ6UXI7 678 aa17.5■□□□□ 0.39
ATG4B-216ENST00000475195 MON1AQ86VX9 555 aa17.5■□□□□ 0.39
ATG4B-216ENST00000475195 MFSD6LQ8IWD5 586 aa17.5■□□□□ 0.39
ATG4B-216ENST00000475195 FBXL6Q8N531 539 aa17.5■□□□□ 0.39
ATG4B-216ENST00000475195 C12orf29Q8N999 325 aa17.5■□□□□ 0.39
ATG4B-216ENST00000475195 EHBP1Q8NDI1 1231 aa17.5■□□□□ 0.39
ATG4B-216ENST00000475195 STKLD1Q8NE28 680 aa17.5■□□□□ 0.39
ATG4B-216ENST00000475195 KCNK16Q96T55 309 aa17.5■□□□□ 0.39
ATG4B-216ENST00000475195 HNRNPABQ99729 332 aaKnown RBP17.5■□□□□ 0.39
ATG4B-216ENST00000475195 KXD1Q9BQD3 176 aa17.5■□□□□ 0.39
ATG4B-216ENST00000475195 TRPV5Q9NQA5 729 aa17.5■□□□□ 0.39
ATG4B-216ENST00000475195 CISHQ9NSE2 258 aa17.5■□□□□ 0.39
ATG4B-216ENST00000475195 EHD2Q9NZN4 543 aa17.5■□□□□ 0.39
ATG4B-216ENST00000475195 KRBA1A5PL33 1030 aa17.49■□□□□ 0.39
ATG4B-216ENST00000475195 TNFRSF10BO14763 440 aa17.49■□□□□ 0.39
ATG4B-216ENST00000475195 CLSTN1O94985 981 aa17.49■□□□□ 0.39
ATG4B-216ENST00000475195 NPR3P17342 541 aa17.49■□□□□ 0.39
ATG4B-216ENST00000475195 PSMC3P17980 439 aa17.49■□□□□ 0.39
ATG4B-216ENST00000475195 ANXA13P27216 316 aa17.49■□□□□ 0.39
ATG4B-216ENST00000475195 VIPR2P41587 438 aa17.49■□□□□ 0.39
ATG4B-216ENST00000475195 PPP3CCP48454 512 aa17.49■□□□□ 0.39
ATG4B-216ENST00000475195 USP46P62068 366 aa17.49■□□□□ 0.39
ATG4B-216ENST00000475195 CUL2Q13617 745 aa17.49■□□□□ 0.39
ATG4B-216ENST00000475195 FAM35AQ86V20 835 aa17.49■□□□□ 0.39
ATG4B-216ENST00000475195 CMTM8Q8IZV2 173 aa17.49■□□□□ 0.39
ATG4B-216ENST00000475195 UBR7Q8N806 425 aa17.49■□□□□ 0.39
ATG4B-216ENST00000475195 DEPDC1BQ8WUY9 529 aa17.49■□□□□ 0.39
ATG4B-216ENST00000475195 CYFIP2Q96F07 1278 aa17.49■□□□□ 0.39
ATG4B-216ENST00000475195 GCNAQ96QF7 691 aa17.49■□□□□ 0.39
ATG4B-216ENST00000475195 COMMD8Q9NX08 183 aa17.49■□□□□ 0.39
ATG4B-216ENST00000475195 DACH1Q9UI36 760 aa17.49■□□□□ 0.39
ATG4B-216ENST00000475195 MAGED2Q9UNF1 606 aaPredicted RBP17.49■□□□□ 0.39
ATG4B-216ENST00000475195 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.49■□□□□ 0.39
ATG4B-216ENST00000475195 OBSL1O75147 1896 aa17.49■□□□□ 0.39
ATG4B-216ENST00000475195 ATP8B3O60423 1300 aa17.48■□□□□ 0.39
ATG4B-216ENST00000475195 NUP210Q8TEM1 1887 aaPredicted RBP17.48■□□□□ 0.39
ATG4B-216ENST00000475195 FAM92AA1XBS5 289 aa17.48■□□□□ 0.39
ATG4B-216ENST00000475195 MBD3O95983 291 aa17.48■□□□□ 0.39
ATG4B-216ENST00000475195 PDGFBP01127 241 aaPredicted RBP17.48■□□□□ 0.39
ATG4B-216ENST00000475195 CFHP08603 1231 aa17.48■□□□□ 0.39
ATG4B-216ENST00000475195 TRIM21P19474 475 aaKnown RBP17.48■□□□□ 0.39
ATG4B-216ENST00000475195 RAD23BP54727 409 aa17.48■□□□□ 0.39
ATG4B-216ENST00000475195 CYP4F8P98187 520 aa17.48■□□□□ 0.39
ATG4B-216ENST00000475195 PFKPQ01813 784 aa17.48■□□□□ 0.39
ATG4B-216ENST00000475195 FCHO2Q0JRZ9 810 aa17.48■□□□□ 0.39
ATG4B-216ENST00000475195 CETN1Q12798 172 aa17.48■□□□□ 0.39
ATG4B-216ENST00000475195 ORC1Q13415 861 aa17.48■□□□□ 0.39
ATG4B-216ENST00000475195 NUP93Q8N1F7 819 aa17.48■□□□□ 0.39
ATG4B-216ENST00000475195 SLC4A11Q8NBS3 891 aa17.48■□□□□ 0.39
ATG4B-216ENST00000475195 ZMIZ2Q8NF64 920 aa17.48■□□□□ 0.39
ATG4B-216ENST00000475195 SLC2A14Q8TDB8 520 aa17.48■□□□□ 0.39
ATG4B-216ENST00000475195 MRPS31Q92665 395 aaKnown RBP17.48■□□□□ 0.39
ATG4B-216ENST00000475195 RSPRY1Q96DX4 576 aa17.48■□□□□ 0.39
ATG4B-216ENST00000475195 SMARCD1Q96GM5 515 aa17.48■□□□□ 0.39
ATG4B-216ENST00000475195 LRRC3BQ96PB8 259 aa17.48■□□□□ 0.39
ATG4B-216ENST00000475195 SMOQ99835 787 aa17.48■□□□□ 0.39
ATG4B-216ENST00000475195 ARID3AQ99856 593 aa17.48■□□□□ 0.39
ATG4B-216ENST00000475195 TRMT61BQ9BVS5 477 aaKnown RBP17.48■□□□□ 0.39
ATG4B-216ENST00000475195 DNAI2Q9GZS0 605 aa17.48■□□□□ 0.39
ATG4B-216ENST00000475195 THAP9Q9H5L6 903 aa17.48■□□□□ 0.39
ATG4B-216ENST00000475195 SLITRK6Q9H5Y7 841 aa17.48■□□□□ 0.39
ATG4B-216ENST00000475195 DMAP1Q9NPF5 467 aaPredicted RBP17.48■□□□□ 0.39
ATG4B-216ENST00000475195 ZDBF2Q9HCK1 2354 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms