RNA–Protein interactions for RNA: ENST00000474929.1

USP54-211, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 590 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-211ENST00000474929 GLDCP23378 1020 aa8.74□□□□□ -1.01
USP54-211ENST00000474929 GLRA2P23416 452 aa8.74□□□□□ -1.01
USP54-211ENST00000474929 CD6P30203 668 aa8.74□□□□□ -1.01
USP54-211ENST00000474929 ARL2P36404 184 aa8.74□□□□□ -1.01
USP54-211ENST00000474929 NLRP12P59046 1061 aa8.74□□□□□ -1.01
USP54-211ENST00000474929 TLE1Q04724 770 aa8.74□□□□□ -1.01
USP54-211ENST00000474929 RESTQ13127 1097 aa8.74□□□□□ -1.01
USP54-211ENST00000474929 PFKFB3Q16875 520 aaPredicted RBP8.74□□□□□ -1.01
USP54-211ENST00000474929 MGAT5BQ3V5L5 792 aa8.74□□□□□ -1.01
USP54-211ENST00000474929 SGO2Q562F6 1265 aa8.74□□□□□ -1.01
USP54-211ENST00000474929 FBXL19Q6PCT2 694 aa8.74□□□□□ -1.01
USP54-211ENST00000474929 NOSTRINQ8IVI9 506 aa8.74□□□□□ -1.01
USP54-211ENST00000474929 SPPL2BQ8TCT7 592 aa8.74□□□□□ -1.01
USP54-211ENST00000474929 ASAP3Q8TDY4 903 aa8.74□□□□□ -1.01
USP54-211ENST00000474929 RFFLQ8WZ73 363 aa8.74□□□□□ -1.01
USP54-211ENST00000474929 NAF1Q96HR8 494 aaKnown RBP8.74□□□□□ -1.01
USP54-211ENST00000474929 NACC1Q96RE7 527 aa8.74□□□□□ -1.01
USP54-211ENST00000474929 MMS19Q96T76 1030 aa8.74□□□□□ -1.01
USP54-211ENST00000474929 SEMA3CQ99985 751 aa8.74□□□□□ -1.01
USP54-211ENST00000474929 TTC12Q9H892 705 aaPredicted RBP8.74□□□□□ -1.01
USP54-211ENST00000474929 XPNPEP1Q9NQW7 623 aa8.74□□□□□ -1.01
USP54-211ENST00000474929 ARHGEF4Q9NR80 690 aa8.74□□□□□ -1.01
USP54-211ENST00000474929 HSPBP1Q9NZL4 362 aa8.74□□□□□ -1.01
USP54-211ENST00000474929 CLCA2Q9UQC9 943 aa8.74□□□□□ -1.01
USP54-211ENST00000474929 STK36Q9NRP7 1315 aa8.74□□□□□ -1.01
USP54-211ENST00000474929 ANO9A1A5B4 782 aa8.73□□□□□ -1.01
USP54-211ENST00000474929 ACKR2O00590 384 aa8.73□□□□□ -1.01
USP54-211ENST00000474929 ADAM23O75077 832 aa8.73□□□□□ -1.01
USP54-211ENST00000474929 PPFIA2O75334 1257 aa8.73□□□□□ -1.01
USP54-211ENST00000474929 LDOC1O95751 146 aaPredicted RBP8.73□□□□□ -1.01
USP54-211ENST00000474929 ITGB2P05107 769 aa8.73□□□□□ -1.01
USP54-211ENST00000474929 KCNE1P15382 129 aa8.73□□□□□ -1.01
USP54-211ENST00000474929 TYMPP19971 482 aa8.73□□□□□ -1.01
USP54-211ENST00000474929 OXTRP30559 389 aa8.73□□□□□ -1.01
USP54-211ENST00000474929 NTSR1P30989 418 aa8.73□□□□□ -1.01
USP54-211ENST00000474929 GRM5P41594 1212 aa8.73□□□□□ -1.01
USP54-211ENST00000474929 GRIA4P48058 902 aa8.73□□□□□ -1.01
USP54-211ENST00000474929 ACADVLP49748 655 aa8.73□□□□□ -1.01
USP54-211ENST00000474929 ORC1Q13415 861 aa8.73□□□□□ -1.01
USP54-211ENST00000474929 KCNB1Q14721 858 aa8.73□□□□□ -1.01
USP54-211ENST00000474929 RTN1Q16799 776 aa8.73□□□□□ -1.01
USP54-211ENST00000474929 XKR4Q5GH76 650 aa8.73□□□□□ -1.01
USP54-211ENST00000474929 ANKRD45Q5TZF3 282 aa8.73□□□□□ -1.01
USP54-211ENST00000474929 CCDC81Q6ZN84 652 aa8.73□□□□□ -1.01
USP54-211ENST00000474929 METTL3Q86U44 580 aaKnown RBP8.73□□□□□ -1.01
USP54-211ENST00000474929 FSIP1Q8NA03 581 aa8.73□□□□□ -1.01
USP54-211ENST00000474929 ZNF579Q8NAF0 562 aaKnown RBP8.73□□□□□ -1.01
USP54-211ENST00000474929 ETNPPLQ8TBG4 499 aa8.73□□□□□ -1.01
USP54-211ENST00000474929 RUFY2Q8WXA3 655 aa8.73□□□□□ -1.01
USP54-211ENST00000474929 POLR3FQ9H1D9 316 aaPredicted RBP8.73□□□□□ -1.01
USP54-211ENST00000474929 CRISPLD1Q9H336 500 aa8.73□□□□□ -1.01
USP54-211ENST00000474929 OSGEPQ9NPF4 335 aa8.73□□□□□ -1.01
USP54-211ENST00000474929 PLSCR2Q9NRY7 297 aa8.73□□□□□ -1.01
USP54-211ENST00000474929 ADAMTS1Q9UHI8 967 aa8.73□□□□□ -1.01
USP54-211ENST00000474929 SSUH2Q9Y2M2 353 aa8.73□□□□□ -1.01
USP54-211ENST00000474929 SLC27A5Q9Y2P5 690 aa8.73□□□□□ -1.01
USP54-211ENST00000474929 V9GY48 417 aaPredicted RBP8.73□□□□□ -1.01
USP54-211ENST00000474929 CYP3A7-CYP3A51PA0A087WV96 503 aa8.72□□□□□ -1.01
USP54-211ENST00000474929 BLACEA4D250 179 aa8.72□□□□□ -1.01
USP54-211ENST00000474929 VNN2O95498 520 aa8.72□□□□□ -1.01
USP54-211ENST00000474929 F11P03951 625 aa8.72□□□□□ -1.01
USP54-211ENST00000474929 OR4Q2P0C623 313 aa8.72□□□□□ -1.01
USP54-211ENST00000474929 ATF6P18850 670 aa8.72□□□□□ -1.01
USP54-211ENST00000474929 NDUFV2P19404 249 aa8.72□□□□□ -1.01
USP54-211ENST00000474929 CYP3A7P24462 503 aa8.72□□□□□ -1.01
USP54-211ENST00000474929 RCAN1P53805 252 aa8.72□□□□□ -1.01
USP54-211ENST00000474929 SOX4Q06945 474 aaPredicted RBP8.72□□□□□ -1.01
USP54-211ENST00000474929 EPHA7Q15375 998 aa8.72□□□□□ -1.01
USP54-211ENST00000474929 EMC10Q5UCC4 262 aa8.72□□□□□ -1.01
USP54-211ENST00000474929 TXNDC8Q6A555 127 aa8.72□□□□□ -1.01
USP54-211ENST00000474929 OVOS1Q6IE37 1185 aa8.72□□□□□ -1.01
USP54-211ENST00000474929 USP49Q70CQ1 688 aa8.72□□□□□ -1.01
USP54-211ENST00000474929 DCBLD1Q8N8Z6 715 aa8.72□□□□□ -1.01
USP54-211ENST00000474929 ATAD1Q8NBU5 361 aa8.72□□□□□ -1.01
USP54-211ENST00000474929 MCPH1Q8NEM0 835 aa8.72□□□□□ -1.01
USP54-211ENST00000474929 SPATA20Q8TB22 786 aa8.72□□□□□ -1.01
USP54-211ENST00000474929 TSC1Q92574 1164 aa8.72□□□□□ -1.01
USP54-211ENST00000474929 CNDP2Q96KP4 475 aaKnown RBP8.72□□□□□ -1.01
USP54-211ENST00000474929 FAM20AQ96MK3 541 aa8.72□□□□□ -1.01
USP54-211ENST00000474929 SLKQ9H2G2 1235 aaPredicted RBP8.72□□□□□ -1.01
USP54-211ENST00000474929 ANKEF1Q9NU02 776 aa8.72□□□□□ -1.01
USP54-211ENST00000474929 CNTN3Q9P232 1028 aa8.72□□□□□ -1.01
USP54-211ENST00000474929 PLEKHB1Q9UF11 243 aaPredicted RBP8.72□□□□□ -1.01
USP54-211ENST00000474929 ARHGAP26Q9UNA1 814 aa8.72□□□□□ -1.01
USP54-211ENST00000474929 OBSL1O75147 1896 aa8.72□□□□□ -1.01
USP54-211ENST00000474929 CCDC196A0A1B0GTZ2 297 aa8.71□□□□□ -1.02
USP54-211ENST00000474929 A0A1B0GVT2 93 aa8.71□□□□□ -1.02
USP54-211ENST00000474929 XPOTO43592 962 aaKnown RBP8.71□□□□□ -1.02
USP54-211ENST00000474929 LARGE1O95461 756 aa8.71□□□□□ -1.02
USP54-211ENST00000474929 CYP17A1P05093 508 aa8.71□□□□□ -1.02
USP54-211ENST00000474929 NFICP08651 508 aa8.71□□□□□ -1.02
USP54-211ENST00000474929 ODC1P11926 461 aa8.71□□□□□ -1.02
USP54-211ENST00000474929 ATP2B1P20020 1258 aa8.71□□□□□ -1.02
USP54-211ENST00000474929 MAOBP27338 520 aa8.71□□□□□ -1.02
USP54-211ENST00000474929 ZNF132P52740 706 aa8.71□□□□□ -1.02
USP54-211ENST00000474929 EFNA5P52803 228 aa8.71□□□□□ -1.02
USP54-211ENST00000474929 GRIN1Q05586 938 aa8.71□□□□□ -1.02
USP54-211ENST00000474929 PPP2R5AQ15172 486 aa8.71□□□□□ -1.02
USP54-211ENST00000474929 DCAF12L1Q5VU92 463 aa8.71□□□□□ -1.02
USP54-211ENST00000474929 KIAA1614Q5VZ46 1190 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms