RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 OTOP3Q7RTS5 596 aa17.99■□□□□ 0.47
SCAF11-206ENST00000474828 FAM35AQ86V20 835 aa17.99■□□□□ 0.47
SCAF11-206ENST00000474828 CREBRFQ8IUR6 639 aa17.99■□□□□ 0.47
SCAF11-206ENST00000474828 ELMOD1Q8N336 334 aa17.99■□□□□ 0.47
SCAF11-206ENST00000474828 FAM200AQ8TCP9 573 aa17.99■□□□□ 0.47
SCAF11-206ENST00000474828 SHC3Q92529 594 aa17.99■□□□□ 0.47
SCAF11-206ENST00000474828 ERGIC2Q96RQ1 377 aa17.99■□□□□ 0.47
SCAF11-206ENST00000474828 PNPLA8Q9NP80 782 aa17.99■□□□□ 0.47
SCAF11-206ENST00000474828 SIK3Q9Y2K2 1263 aa17.99■□□□□ 0.47
SCAF11-206ENST00000474828 NR2E1Q9Y466 385 aa17.99■□□□□ 0.47
SCAF11-206ENST00000474828 DAAM1Q9Y4D1 1078 aa17.99■□□□□ 0.47
SCAF11-206ENST00000474828 FAM92AA1XBS5 289 aa17.98■□□□□ 0.47
SCAF11-206ENST00000474828 SOBPA7XYQ1 873 aa17.98■□□□□ 0.47
SCAF11-206ENST00000474828 RNF225M0QZC1 329 aaPredicted RBP17.98■□□□□ 0.47
SCAF11-206ENST00000474828 ZNF197O14709 1029 aa17.98■□□□□ 0.47
SCAF11-206ENST00000474828 TNFRSF10BO14763 440 aa17.98■□□□□ 0.47
SCAF11-206ENST00000474828 TRIM66O15016 1216 aa17.98■□□□□ 0.47
SCAF11-206ENST00000474828 FGF19O95750 216 aa17.98■□□□□ 0.47
SCAF11-206ENST00000474828 CSH1P0DML2 217 aa17.98■□□□□ 0.47
SCAF11-206ENST00000474828 CSH2P0DML3 217 aa17.98■□□□□ 0.47
SCAF11-206ENST00000474828 RFX1P22670 979 aa17.98■□□□□ 0.47
SCAF11-206ENST00000474828 FSHRP23945 695 aa17.98■□□□□ 0.47
SCAF11-206ENST00000474828 CYP27A1Q02318 531 aa17.98■□□□□ 0.47
SCAF11-206ENST00000474828 ORC1Q13415 861 aa17.98■□□□□ 0.47
SCAF11-206ENST00000474828 VEPH1Q14D04 833 aa17.98■□□□□ 0.47
SCAF11-206ENST00000474828 DDR2Q16832 855 aa17.98■□□□□ 0.47
SCAF11-206ENST00000474828 POTEHQ6S545 545 aa17.98■□□□□ 0.47
SCAF11-206ENST00000474828 RRAGAQ7L523 313 aa17.98■□□□□ 0.47
SCAF11-206ENST00000474828 ZMIZ2Q8NF64 920 aa17.98■□□□□ 0.47
SCAF11-206ENST00000474828 ANKRD20A12PQ8NF67 263 aa17.98■□□□□ 0.47
SCAF11-206ENST00000474828 SLC2A14Q8TDB8 520 aa17.98■□□□□ 0.47
SCAF11-206ENST00000474828 CYFIP2Q96F07 1278 aa17.98■□□□□ 0.47
SCAF11-206ENST00000474828 SMARCD1Q96GM5 515 aa17.98■□□□□ 0.47
SCAF11-206ENST00000474828 UBXN6Q9BZV1 441 aa17.98■□□□□ 0.47
SCAF11-206ENST00000474828 VPS16Q9H269 839 aa17.98■□□□□ 0.47
SCAF11-206ENST00000474828 ZNF334Q9HCZ1 680 aaPredicted RBP17.98■□□□□ 0.47
SCAF11-206ENST00000474828 CD320Q9NPF0 282 aa17.98■□□□□ 0.47
SCAF11-206ENST00000474828 ATP8B3O60423 1300 aa17.98■□□□□ 0.47
SCAF11-206ENST00000474828 C2CD4DB7Z1M9 353 aa17.97■□□□□ 0.47
SCAF11-206ENST00000474828 CLDN5O00501 218 aa17.97■□□□□ 0.47
SCAF11-206ENST00000474828 NRG2O14511 850 aaPredicted RBP17.97■□□□□ 0.47
SCAF11-206ENST00000474828 CCDC130P13994 396 aa17.97■□□□□ 0.47
SCAF11-206ENST00000474828 TRIM21P19474 475 aaKnown RBP17.97■□□□□ 0.47
SCAF11-206ENST00000474828 WEE1P30291 646 aa17.97■□□□□ 0.47
SCAF11-206ENST00000474828 GPR15P49685 360 aa17.97■□□□□ 0.47
SCAF11-206ENST00000474828 MFAP3P55082 362 aa17.97■□□□□ 0.47
SCAF11-206ENST00000474828 APBA1Q02410 837 aa17.97■□□□□ 0.47
SCAF11-206ENST00000474828 MEA1Q16626 185 aa17.97■□□□□ 0.47
SCAF11-206ENST00000474828 PKDCCQ504Y2 493 aa17.97■□□□□ 0.47
SCAF11-206ENST00000474828 KLHDC7AQ5VTJ3 777 aa17.97■□□□□ 0.47
SCAF11-206ENST00000474828 GAREM2Q75VX8 874 aa17.97■□□□□ 0.47
SCAF11-206ENST00000474828 TMEM150AQ86TG1 271 aa17.97■□□□□ 0.47
SCAF11-206ENST00000474828 HS6ST3Q8IZP7 471 aa17.97■□□□□ 0.47
SCAF11-206ENST00000474828 PLCD3Q8N3E9 789 aa17.97■□□□□ 0.47
SCAF11-206ENST00000474828 ITFG1Q8TB96 612 aa17.97■□□□□ 0.47
SCAF11-206ENST00000474828 MYADMQ96S97 322 aa17.97■□□□□ 0.47
SCAF11-206ENST00000474828 SMOQ99835 787 aa17.97■□□□□ 0.47
SCAF11-206ENST00000474828 CORO1BQ9BR76 489 aa17.97■□□□□ 0.47
SCAF11-206ENST00000474828 UBE2TQ9NPD8 197 aaPredicted RBP17.97■□□□□ 0.47
SCAF11-206ENST00000474828 RTN4Q9NQC3 1192 aaKnown RBP17.97■□□□□ 0.47
SCAF11-206ENST00000474828 ASAH2Q9NR71 780 aa17.97■□□□□ 0.47
SCAF11-206ENST00000474828 COMMD8Q9NX08 183 aa17.97■□□□□ 0.47
SCAF11-206ENST00000474828 GDE1Q9NZC3 331 aa17.97■□□□□ 0.47
SCAF11-206ENST00000474828 CDH7Q9ULB5 785 aa17.97■□□□□ 0.47
SCAF11-206ENST00000474828 SLC38A8A6NNN8 435 aa17.96■□□□□ 0.47
SCAF11-206ENST00000474828 BECN2A8MW95 431 aa17.96■□□□□ 0.47
SCAF11-206ENST00000474828 HHLA1C9JL84 531 aa17.96■□□□□ 0.47
SCAF11-206ENST00000474828 F8VP50 259 aa17.96■□□□□ 0.47
SCAF11-206ENST00000474828 F11P03951 625 aa17.96■□□□□ 0.47
SCAF11-206ENST00000474828 VDRP11473 427 aa17.96■□□□□ 0.47
SCAF11-206ENST00000474828 LAMP2P13473 410 aa17.96■□□□□ 0.47
SCAF11-206ENST00000474828 ZNF394Q53GI3 561 aa17.96■□□□□ 0.47
SCAF11-206ENST00000474828 PPP1R26Q5T8A7 1209 aaPredicted RBP17.96■□□□□ 0.47
SCAF11-206ENST00000474828 CYP4A22Q5TCH4 519 aa17.96■□□□□ 0.47
SCAF11-206ENST00000474828 CLEC20AQ6ZU45 233 aa17.96■□□□□ 0.47
SCAF11-206ENST00000474828 LUZP1Q86V48 1076 aa17.96■□□□□ 0.47
SCAF11-206ENST00000474828 NPAS3Q8IXF0 933 aa17.96■□□□□ 0.47
SCAF11-206ENST00000474828 FGF13Q92913 245 aa17.96■□□□□ 0.47
SCAF11-206ENST00000474828 ZSWIM1Q9BR11 485 aa17.96■□□□□ 0.47
SCAF11-206ENST00000474828 GPR88Q9GZN0 384 aa17.96■□□□□ 0.47
SCAF11-206ENST00000474828 GANQ9H2C0 597 aa17.96■□□□□ 0.47
SCAF11-206ENST00000474828 DMAP1Q9NPF5 467 aaPredicted RBP17.96■□□□□ 0.47
SCAF11-206ENST00000474828 ZMYM5Q9UJ78 669 aa17.96■□□□□ 0.47
SCAF11-206ENST00000474828 AJAP1Q9UKB5 411 aaPredicted RBP17.96■□□□□ 0.47
SCAF11-206ENST00000474828 DOCK6Q96HP0 2047 aa17.96■□□□□ 0.47
SCAF11-206ENST00000474828 NCANO14594 1321 aa17.96■□□□□ 0.46
SCAF11-206ENST00000474828 DOCK8Q8NF50 2099 aa17.95■□□□□ 0.46
SCAF11-206ENST00000474828 A0A1B0GTH6 734 aa17.95■□□□□ 0.46
SCAF11-206ENST00000474828 ANHXE9PGG2 379 aa17.95■□□□□ 0.46
SCAF11-206ENST00000474828 O00370 1275 aa17.95■□□□□ 0.46
SCAF11-206ENST00000474828 BEST1O76090 585 aa17.95■□□□□ 0.46
SCAF11-206ENST00000474828 CLSTN1O94985 981 aa17.95■□□□□ 0.46
SCAF11-206ENST00000474828 TPM2P07951 284 aa17.95■□□□□ 0.46
SCAF11-206ENST00000474828 UCHL3P15374 230 aa17.95■□□□□ 0.46
SCAF11-206ENST00000474828 CDK11BP21127 795 aaKnown RBP17.95■□□□□ 0.46
SCAF11-206ENST00000474828 GRIK1P39086 918 aa17.95■□□□□ 0.46
SCAF11-206ENST00000474828 CDR1P51861 262 aa17.95■□□□□ 0.46
SCAF11-206ENST00000474828 CNGA2Q16280 664 aa17.95■□□□□ 0.46
SCAF11-206ENST00000474828 GJB7Q6PEY0 223 aa17.95■□□□□ 0.46
SCAF11-206ENST00000474828 TMEM270Q6UE05 265 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms