RNA–Protein interactions for RNA: ENST00000474766.1

SH3D21-202, Transcript of SH3 domain containing 21, humanhuman

TSL 1 (best)

Gene SH3D21, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-202ENST00000474766 FNBP1Q96RU3 617 aa22.28■■□□□ 1.16
SH3D21-202ENST00000474766 NIFKQ9BYG3 293 aaKnown RBP22.28■■□□□ 1.16
SH3D21-202ENST00000474766 HAPLN2Q9GZV7 340 aa22.28■■□□□ 1.16
SH3D21-202ENST00000474766 VCXQ9H320 206 aa22.28■■□□□ 1.16
SH3D21-202ENST00000474766 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.28■■□□□ 1.16
SH3D21-202ENST00000474766 SIP14410 1827 aa22.28■■□□□ 1.16
SH3D21-202ENST00000474766 IGKV6D-21A0A0A0MT36 114 aa22.27■■□□□ 1.16
SH3D21-202ENST00000474766 FAM47DPA6NHR8 397 aa22.27■■□□□ 1.16
SH3D21-202ENST00000474766 CAPN15O75808 1086 aa22.27■■□□□ 1.16
SH3D21-202ENST00000474766 CALCAP01258 141 aa22.27■■□□□ 1.16
SH3D21-202ENST00000474766 CYP1A1P04798 512 aaPredicted RBP22.27■■□□□ 1.16
SH3D21-202ENST00000474766 GLRA2P23416 452 aa22.27■■□□□ 1.16
SH3D21-202ENST00000474766 FOXN2P32314 431 aa22.27■■□□□ 1.16
SH3D21-202ENST00000474766 KRT17Q04695 432 aa22.27■■□□□ 1.16
SH3D21-202ENST00000474766 DNAJC9Q8WXX5 260 aa22.27■■□□□ 1.16
SH3D21-202ENST00000474766 TRIM11Q96F44 468 aa22.27■■□□□ 1.16
SH3D21-202ENST00000474766 DCLRE1BQ9H816 532 aa22.27■■□□□ 1.16
SH3D21-202ENST00000474766 MLXIPLQ9NP71 852 aa22.27■■□□□ 1.16
SH3D21-202ENST00000474766 VNN1O95497 513 aa22.26■■□□□ 1.15
SH3D21-202ENST00000474766 TNNI1P19237 187 aa22.26■■□□□ 1.15
SH3D21-202ENST00000474766 ACO1P21399 889 aaKnown RBP22.26■■□□□ 1.15
SH3D21-202ENST00000474766 PDCD2Q16342 344 aaPredicted RBP22.26■■□□□ 1.15
SH3D21-202ENST00000474766 SLFN12LQ6IEE8 588 aa22.26■■□□□ 1.15
SH3D21-202ENST00000474766 CEP128Q6ZU80 1094 aa22.26■■□□□ 1.15
SH3D21-202ENST00000474766 GRK7Q8WTQ7 553 aa22.26■■□□□ 1.15
SH3D21-202ENST00000474766 TEKT4Q8WW24 435 aa22.26■■□□□ 1.15
SH3D21-202ENST00000474766 KATNBL1Q9H079 304 aa22.26■■□□□ 1.15
SH3D21-202ENST00000474766 EURLQ9NYK6 297 aa22.26■■□□□ 1.15
SH3D21-202ENST00000474766 CHKBQ9Y259 395 aa22.26■■□□□ 1.15
SH3D21-202ENST00000474766 PTPRJQ12913 1337 aa22.26■■□□□ 1.15
SH3D21-202ENST00000474766 ASB14A6NK59 587 aa22.26■■□□□ 1.15
SH3D21-202ENST00000474766 THAP12O43422 761 aa22.26■■□□□ 1.15
SH3D21-202ENST00000474766 GNAT1P11488 350 aa22.26■■□□□ 1.15
SH3D21-202ENST00000474766 KCNJ1P48048 391 aa22.26■■□□□ 1.15
SH3D21-202ENST00000474766 ACOT2P49753 483 aa22.26■■□□□ 1.15
SH3D21-202ENST00000474766 CENPCQ03188 943 aa22.26■■□□□ 1.15
SH3D21-202ENST00000474766 LMBRD2Q68DH5 695 aaPredicted RBP22.26■■□□□ 1.15
SH3D21-202ENST00000474766 SLC7A6OSQ96CW6 309 aaPredicted RBP22.26■■□□□ 1.15
SH3D21-202ENST00000474766 DEFB118Q96PH6 123 aa22.26■■□□□ 1.15
SH3D21-202ENST00000474766 TMEM106CQ9BVX2 250 aa22.26■■□□□ 1.15
SH3D21-202ENST00000474766 TRAIPQ9BWF2 469 aa22.26■■□□□ 1.15
SH3D21-202ENST00000474766 TBC1D10AQ9BXI6 508 aa22.26■■□□□ 1.15
SH3D21-202ENST00000474766 ANAPC7Q9UJX3 599 aa22.26■■□□□ 1.15
SH3D21-202ENST00000474766 ZMYND8Q9ULU4 1186 aaPredicted RBP22.26■■□□□ 1.15
SH3D21-202ENST00000474766 NAALADL1Q9UQQ1 740 aa22.26■■□□□ 1.15
SH3D21-202ENST00000474766 SH3BP1Q9Y3L3 701 aa22.26■■□□□ 1.15
SH3D21-202ENST00000474766 RTN3O95197 1032 aaPredicted RBP22.25■■□□□ 1.15
SH3D21-202ENST00000474766 GJB1P08034 283 aa22.25■■□□□ 1.15
SH3D21-202ENST00000474766 ZNF865P0CJ78 1059 aaPredicted RBP22.25■■□□□ 1.15
SH3D21-202ENST00000474766 IVDP26440 423 aa22.25■■□□□ 1.15
SH3D21-202ENST00000474766 CHKAP35790 457 aa22.25■■□□□ 1.15
SH3D21-202ENST00000474766 SLC1A1P43005 524 aa22.25■■□□□ 1.15
SH3D21-202ENST00000474766 PTDSS1P48651 473 aaKnown RBP22.25■■□□□ 1.15
SH3D21-202ENST00000474766 MTHFD1LQ6UB35 978 aa22.25■■□□□ 1.15
SH3D21-202ENST00000474766 BBOF1Q8ND07 529 aa22.25■■□□□ 1.15
SH3D21-202ENST00000474766 NINJ2Q9NZG7 142 aa22.25■■□□□ 1.15
SH3D21-202ENST00000474766 ASIC3Q9UHC3 531 aa22.25■■□□□ 1.15
SH3D21-202ENST00000474766 LNPEPQ9UIQ6 1025 aa22.25■■□□□ 1.15
SH3D21-202ENST00000474766 K7ERI5 159 aa22.24■■□□□ 1.15
SH3D21-202ENST00000474766 ASMTLO95671 621 aa22.24■■□□□ 1.15
SH3D21-202ENST00000474766 LDHAP00338 332 aaKnown RBP22.24■■□□□ 1.15
SH3D21-202ENST00000474766 ABHD2P08910 425 aa22.24■■□□□ 1.15
SH3D21-202ENST00000474766 GSTA2P09210 222 aa22.24■■□□□ 1.15
SH3D21-202ENST00000474766 GM2AP17900 193 aa22.24■■□□□ 1.15
SH3D21-202ENST00000474766 PIK3CAP42336 1068 aa22.24■■□□□ 1.15
SH3D21-202ENST00000474766 RPS6KA3P51812 740 aa22.24■■□□□ 1.15
SH3D21-202ENST00000474766 LONP2Q86WA8 852 aa22.24■■□□□ 1.15
SH3D21-202ENST00000474766 CYP4X1Q8N118 509 aa22.24■■□□□ 1.15
SH3D21-202ENST00000474766 DEPTORQ8TB45 409 aa22.24■■□□□ 1.15
SH3D21-202ENST00000474766 STOML1Q9UBI4 398 aa22.24■■□□□ 1.15
SH3D21-202ENST00000474766 A0A0B4J269 797 aa22.24■■□□□ 1.15
SH3D21-202ENST00000474766 CLDN3O15551 220 aa22.24■■□□□ 1.15
SH3D21-202ENST00000474766 PRPF4O43172 522 aaKnown RBP eCLIP22.24■■□□□ 1.158e-8■■■■□ 20.5
SH3D21-202ENST00000474766 RRM1P23921 792 aa22.24■■□□□ 1.15
SH3D21-202ENST00000474766 KYNUQ16719 465 aa22.24■■□□□ 1.15
SH3D21-202ENST00000474766 MON1BQ7L1V2 547 aa22.24■■□□□ 1.15
SH3D21-202ENST00000474766 EEPD1Q7L9B9 569 aa22.24■■□□□ 1.15
SH3D21-202ENST00000474766 SRRM1Q8IYB3 904 aaKnown RBP22.24■■□□□ 1.15
SH3D21-202ENST00000474766 CPA5Q8WXQ8 436 aa22.24■■□□□ 1.15
SH3D21-202ENST00000474766 SLC7A3Q8WY07 619 aa22.24■■□□□ 1.15
SH3D21-202ENST00000474766 FAM136AQ96C01 138 aa22.24■■□□□ 1.15
SH3D21-202ENST00000474766 ZBTB45Q96K62 511 aaPredicted RBP22.24■■□□□ 1.15
SH3D21-202ENST00000474766 TRAPPC9Q96Q05 1148 aa22.24■■□□□ 1.15
SH3D21-202ENST00000474766 SYT15Q9BQS2 421 aa22.24■■□□□ 1.15
SH3D21-202ENST00000474766 FOXP3Q9BZS1 431 aa22.24■■□□□ 1.15
SH3D21-202ENST00000474766 SAR1AQ9NR31 198 aa22.24■■□□□ 1.15
SH3D21-202ENST00000474766 SDAD1Q9NVU7 687 aaKnown RBP eCLIP22.24■■□□□ 1.154e-6■■■■■ 58.9
SH3D21-202ENST00000474766 PHTF1Q9UMS5 762 aa22.24■■□□□ 1.15
SH3D21-202ENST00000474766 CNTN6Q9UQ52 1028 aa22.24■■□□□ 1.15
SH3D21-202ENST00000474766 AP1G2O75843 785 aa22.23■■□□□ 1.15
SH3D21-202ENST00000474766 GAS8O95995 478 aa22.23■■□□□ 1.15
SH3D21-202ENST00000474766 EN2P19622 333 aaPredicted RBP22.23■■□□□ 1.15
SH3D21-202ENST00000474766 TARSP26639 723 aaKnown RBP22.23■■□□□ 1.15
SH3D21-202ENST00000474766 WDR4P57081 412 aaKnown RBP22.23■■□□□ 1.15
SH3D21-202ENST00000474766 CUL2Q13617 745 aa22.23■■□□□ 1.15
SH3D21-202ENST00000474766 TARBP2Q15633 366 aaKnown RBP22.23■■□□□ 1.15
SH3D21-202ENST00000474766 SLC5A9Q2M3M2 681 aa22.23■■□□□ 1.15
SH3D21-202ENST00000474766 SGO2Q562F6 1265 aa22.23■■□□□ 1.15
SH3D21-202ENST00000474766 TMEM134Q9H6X4 195 aa22.23■■□□□ 1.15
SH3D21-202ENST00000474766 APOBEC3GQ9HC16 384 aaKnown RBP22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms