RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 UNC45AQ9H3U1 944 aa19.47■□□□□ 0.71
ECHDC1-214ENST00000474289 A0A0J9YVX5 310 aa19.46■□□□□ 0.71
ECHDC1-214ENST00000474289 DSG3P32926 999 aa19.46■□□□□ 0.71
ECHDC1-214ENST00000474289 CPOXP36551 454 aa19.46■□□□□ 0.71
ECHDC1-214ENST00000474289 SLC18A2Q05940 514 aa19.46■□□□□ 0.71
ECHDC1-214ENST00000474289 NFIAQ12857 509 aa19.46■□□□□ 0.71
ECHDC1-214ENST00000474289 PTK7Q13308 1070 aa19.46■□□□□ 0.71
ECHDC1-214ENST00000474289 PRR5LQ6MZQ0 368 aa19.46■□□□□ 0.71
ECHDC1-214ENST00000474289 FBXL19Q6PCT2 694 aa19.46■□□□□ 0.71
ECHDC1-214ENST00000474289 PRICKLE1Q96MT3 831 aaPredicted RBP19.46■□□□□ 0.71
ECHDC1-214ENST00000474289 MECRQ9BV79 373 aa19.46■□□□□ 0.71
ECHDC1-214ENST00000474289 C1orf21Q9H246 121 aa19.46■□□□□ 0.71
ECHDC1-214ENST00000474289 C17orf75Q9HAS0 396 aa19.46■□□□□ 0.71
ECHDC1-214ENST00000474289 GINM1Q9NU53 330 aa19.46■□□□□ 0.71
ECHDC1-214ENST00000474289 SNCAIPQ9Y6H5 919 aa19.46■□□□□ 0.71
ECHDC1-214ENST00000474289 MYH9P35579 1960 aaKnown RBP19.46■□□□□ 0.71
ECHDC1-214ENST00000474289 ALDH18A1P54886 795 aaKnown RBP19.46■□□□□ 0.71
ECHDC1-214ENST00000474289 PLCB3Q01970 1234 aa19.46■□□□□ 0.71
ECHDC1-214ENST00000474289 MTMR2Q13614 643 aa19.46■□□□□ 0.71
ECHDC1-214ENST00000474289 ALCAMQ13740 583 aa19.46■□□□□ 0.71
ECHDC1-214ENST00000474289 NCOA4Q13772 614 aa19.46■□□□□ 0.71
ECHDC1-214ENST00000474289 EFHC1Q5JVL4 640 aa19.46■□□□□ 0.71
ECHDC1-214ENST00000474289 PALM2Q8IXS6 379 aa19.46■□□□□ 0.71
ECHDC1-214ENST00000474289 RCOR2Q8IZ40 523 aa19.46■□□□□ 0.71
ECHDC1-214ENST00000474289 GDPD5Q8WTR4 605 aa19.46■□□□□ 0.71
ECHDC1-214ENST00000474289 CPT1BQ92523 772 aa19.46■□□□□ 0.71
ECHDC1-214ENST00000474289 MKL1Q969V6 931 aa19.46■□□□□ 0.71
ECHDC1-214ENST00000474289 WWP1Q9H0M0 922 aa19.46■□□□□ 0.71
ECHDC1-214ENST00000474289 CCNL1Q9UK58 526 aaPredicted RBP19.46■□□□□ 0.71
ECHDC1-214ENST00000474289 C15orf38-AP3S2A0A0A6YYH1 394 aa19.45■□□□□ 0.7
ECHDC1-214ENST00000474289 TLR3O15455 904 aaKnown RBP19.45■□□□□ 0.7
ECHDC1-214ENST00000474289 STK10O94804 968 aaKnown RBP19.45■□□□□ 0.7
ECHDC1-214ENST00000474289 KRT1P04264 644 aa19.45■□□□□ 0.7
ECHDC1-214ENST00000474289 ITGAVP06756 1048 aa19.45■□□□□ 0.7
ECHDC1-214ENST00000474289 HIC1Q14526 733 aa19.45■□□□□ 0.7
ECHDC1-214ENST00000474289 ANKRD20A4Q4UJ75 823 aa19.45■□□□□ 0.7
ECHDC1-214ENST00000474289 RBM44Q6ZP01 1051 aaKnown RBP19.45■□□□□ 0.7
ECHDC1-214ENST00000474289 ARPINQ7Z6K5 226 aa19.45■□□□□ 0.7
ECHDC1-214ENST00000474289 USP29Q9HBJ7 922 aa19.45■□□□□ 0.7
ECHDC1-214ENST00000474289 MARCOQ9UEW3 520 aaPredicted RBP19.45■□□□□ 0.7
ECHDC1-214ENST00000474289 SOX13Q9UN79 622 aa19.45■□□□□ 0.7
ECHDC1-214ENST00000474289 IQANK1A0A1B0GTG1 560 aa19.45■□□□□ 0.7
ECHDC1-214ENST00000474289 I3L4J1 428 aa19.45■□□□□ 0.7
ECHDC1-214ENST00000474289 TXNDC9O14530 226 aa19.45■□□□□ 0.7
ECHDC1-214ENST00000474289 CFHP08603 1231 aa19.45■□□□□ 0.7
ECHDC1-214ENST00000474289 KITP10721 976 aa19.45■□□□□ 0.7
ECHDC1-214ENST00000474289 HIRAP54198 1017 aaPredicted RBP19.45■□□□□ 0.7
ECHDC1-214ENST00000474289 AQP5P55064 265 aa19.45■□□□□ 0.7
ECHDC1-214ENST00000474289 FAAP100Q0VG06 881 aa19.45■□□□□ 0.7
ECHDC1-214ENST00000474289 BST1Q10588 318 aa19.45■□□□□ 0.7
ECHDC1-214ENST00000474289 IKQ13123 557 aaPredicted RBP19.45■□□□□ 0.7
ECHDC1-214ENST00000474289 UBAP2LQ14157 1087 aaKnown RBP19.45■□□□□ 0.7
ECHDC1-214ENST00000474289 CES4AQ5XG92 561 aa19.45■□□□□ 0.7
ECHDC1-214ENST00000474289 KLC3Q6P597 504 aa19.45■□□□□ 0.7
ECHDC1-214ENST00000474289 B3GNT6Q6ZMB0 384 aa19.45■□□□□ 0.7
ECHDC1-214ENST00000474289 CDHR3Q6ZTQ4 885 aa19.45■□□□□ 0.7
ECHDC1-214ENST00000474289 PASD1Q8IV76 773 aa19.45■□□□□ 0.7
ECHDC1-214ENST00000474289 PPIL6Q8IXY8 311 aa19.45■□□□□ 0.7
ECHDC1-214ENST00000474289 SLC26A7Q8TE54 656 aa19.45■□□□□ 0.7
ECHDC1-214ENST00000474289 NKD2Q969F2 451 aaPredicted RBP19.45■□□□□ 0.7
ECHDC1-214ENST00000474289 C7orf26Q96N11 449 aa19.45■□□□□ 0.7
ECHDC1-214ENST00000474289 ACAP3Q96P50 834 aa19.45■□□□□ 0.7
ECHDC1-214ENST00000474289 ZNF395Q9H8N7 513 aaPredicted RBP19.45■□□□□ 0.7
ECHDC1-214ENST00000474289 ADAMTSL1Q8N6G6 1762 aa19.45■□□□□ 0.7
ECHDC1-214ENST00000474289 ARHGAP42A6NI28 874 aa19.44■□□□□ 0.7
ECHDC1-214ENST00000474289 IPO5O00410 1097 aaKnown RBP19.44■□□□□ 0.7
ECHDC1-214ENST00000474289 NDC80O14777 642 aa19.44■□□□□ 0.7
ECHDC1-214ENST00000474289 AP1G1O43747 822 aa19.44■□□□□ 0.7
ECHDC1-214ENST00000474289 UBXN2AP68543 259 aa19.44■□□□□ 0.7
ECHDC1-214ENST00000474289 XIAPP98170 497 aa19.44■□□□□ 0.7
ECHDC1-214ENST00000474289 LIN9Q5TKA1 542 aa19.44■□□□□ 0.7
ECHDC1-214ENST00000474289 HAUS6Q7Z4H7 955 aa19.44■□□□□ 0.7
ECHDC1-214ENST00000474289 NAT8LQ8N9F0 302 aa19.44■□□□□ 0.7
ECHDC1-214ENST00000474289 POMGNT1Q8WZA1 660 aa19.44■□□□□ 0.7
ECHDC1-214ENST00000474289 MRPL47Q9HD33 250 aaKnown RBP19.44■□□□□ 0.7
ECHDC1-214ENST00000474289 DDX18Q9NVP1 670 aaKnown RBP19.44■□□□□ 0.7
ECHDC1-214ENST00000474289 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.44■□□□□ 0.7
ECHDC1-214ENST00000474289 PPME1Q9Y570 386 aa19.44■□□□□ 0.7
ECHDC1-214ENST00000474289 PCDHB2Q9Y5E7 798 aa19.44■□□□□ 0.7
ECHDC1-214ENST00000474289 E7ESA3 106 aa19.44■□□□□ 0.7
ECHDC1-214ENST00000474289 MAPTP10636 758 aaKnown RBP19.44■□□□□ 0.7
ECHDC1-214ENST00000474289 SLC25A3Q00325 362 aa19.44■□□□□ 0.7
ECHDC1-214ENST00000474289 TBL3Q12788 808 aaKnown RBP19.44■□□□□ 0.7
ECHDC1-214ENST00000474289 BBS9Q3SYG4 887 aa19.44■□□□□ 0.7
ECHDC1-214ENST00000474289 MAP3K21Q5TCX8 1036 aa19.44■□□□□ 0.7
ECHDC1-214ENST00000474289 CDC42EP5Q6NZY7 148 aa19.44■□□□□ 0.7
ECHDC1-214ENST00000474289 PCGF5Q86SE9 256 aa19.44■□□□□ 0.7
ECHDC1-214ENST00000474289 TAB3Q8N5C8 712 aaPredicted RBP19.44■□□□□ 0.7
ECHDC1-214ENST00000474289 ACSF2Q96CM8 615 aaPredicted RBP19.44■□□□□ 0.7
ECHDC1-214ENST00000474289 FAM84AQ96KN4 292 aa19.44■□□□□ 0.7
ECHDC1-214ENST00000474289 SRPK1Q96SB4 655 aaKnown RBP19.44■□□□□ 0.7
ECHDC1-214ENST00000474289 SMYD3Q9H7B4 428 aa19.44■□□□□ 0.7
ECHDC1-214ENST00000474289 LOXHD1Q8IVV2 1947 aa19.44■□□□□ 0.7
ECHDC1-214ENST00000474289 TCRBV7S3A2A0A539 114 aa19.43■□□□□ 0.7
ECHDC1-214ENST00000474289 TFAP2AP05549 437 aa19.43■□□□□ 0.7
ECHDC1-214ENST00000474289 SSTR3P32745 418 aaPredicted RBP19.43■□□□□ 0.7
ECHDC1-214ENST00000474289 GDF10P55107 478 aa19.43■□□□□ 0.7
ECHDC1-214ENST00000474289 TMPRSS15P98073 1019 aa19.43■□□□□ 0.7
ECHDC1-214ENST00000474289 GTF2BQ00403 316 aa19.43■□□□□ 0.7
ECHDC1-214ENST00000474289 GCNT1Q02742 428 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms