RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 TDRD5Q8NAT2 981 aaKnown RBP13.97□□□□□ -0.17
TPM3-216ENST00000473036 EHBP1Q8NDI1 1231 aa13.97□□□□□ -0.17
TPM3-216ENST00000473036 ZNF518BQ9C0D4 1074 aa13.97□□□□□ -0.17
TPM3-216ENST00000473036 SEMA4AQ9H3S1 761 aa13.97□□□□□ -0.17
TPM3-216ENST00000473036 SMOC2Q9H3U7 446 aa13.97□□□□□ -0.17
TPM3-216ENST00000473036 IL21Q9HBE4 155 aa13.97□□□□□ -0.17
TPM3-216ENST00000473036 AVENQ9NQS1 362 aaPredicted RBP13.97□□□□□ -0.17
TPM3-216ENST00000473036 NFE2L3Q9Y4A8 694 aa13.97□□□□□ -0.17
TPM3-216ENST00000473036 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.97□□□□□ -0.17
TPM3-216ENST00000473036 ANAPC1Q9H1A4 1944 aa13.97□□□□□ -0.17
TPM3-216ENST00000473036 DCHS1Q96JQ0 3298 aa13.96□□□□□ -0.17
TPM3-216ENST00000473036 MYH10P35580 1976 aa13.96□□□□□ -0.17
TPM3-216ENST00000473036 CLSTN1O94985 981 aa13.96□□□□□ -0.17
TPM3-216ENST00000473036 FGFR1OPO95684 399 aaKnown RBP13.96□□□□□ -0.17
TPM3-216ENST00000473036 PDGFBP01127 241 aaPredicted RBP13.96□□□□□ -0.17
TPM3-216ENST00000473036 ASGR2P07307 311 aa13.96□□□□□ -0.17
TPM3-216ENST00000473036 CCDC130P13994 396 aa13.96□□□□□ -0.17
TPM3-216ENST00000473036 SLC9A1P19634 815 aa13.96□□□□□ -0.17
TPM3-216ENST00000473036 ACO1P21399 889 aaKnown RBP13.96□□□□□ -0.17
TPM3-216ENST00000473036 FSHRP23945 695 aa13.96□□□□□ -0.17
TPM3-216ENST00000473036 TUFMP49411 452 aaKnown RBP13.96□□□□□ -0.17
TPM3-216ENST00000473036 CYP27A1Q02318 531 aa13.96□□□□□ -0.17
TPM3-216ENST00000473036 SMARCB1Q12824 385 aa13.96□□□□□ -0.17
TPM3-216ENST00000473036 CUL2Q13617 745 aa13.96□□□□□ -0.17
TPM3-216ENST00000473036 ANO6Q4KMQ2 910 aa13.96□□□□□ -0.17
TPM3-216ENST00000473036 PHLDB3Q6NSJ2 640 aa13.96□□□□□ -0.17
TPM3-216ENST00000473036 GAREM2Q75VX8 874 aa13.96□□□□□ -0.17
TPM3-216ENST00000473036 CREBRFQ8IUR6 639 aa13.96□□□□□ -0.17
TPM3-216ENST00000473036 NPAS3Q8IXF0 933 aa13.96□□□□□ -0.17
TPM3-216ENST00000473036 TMEM105Q8N8V8 129 aa13.96□□□□□ -0.17
TPM3-216ENST00000473036 SHKBP1Q8TBC3 707 aa13.96□□□□□ -0.17
TPM3-216ENST00000473036 ING5Q8WYH8 240 aa13.96□□□□□ -0.17
TPM3-216ENST00000473036 FGF13Q92913 245 aa13.96□□□□□ -0.17
TPM3-216ENST00000473036 PSMG2Q969U7 264 aa13.96□□□□□ -0.17
TPM3-216ENST00000473036 FUBP3Q96I24 572 aaKnown RBP eCLIP13.96□□□□□ -0.17
TPM3-216ENST00000473036 ZSWIM3Q96MP5 696 aa13.96□□□□□ -0.17
TPM3-216ENST00000473036 KREMEN1Q96MU8 473 aa13.96□□□□□ -0.17
TPM3-216ENST00000473036 CRACR2AQ9BSW2 395 aa13.96□□□□□ -0.17
TPM3-216ENST00000473036 MFSD1Q9H3U5 465 aa13.96□□□□□ -0.17
TPM3-216ENST00000473036 CYP3A43Q9HB55 503 aa13.96□□□□□ -0.17
TPM3-216ENST00000473036 ABCB6Q9NP58 842 aa13.96□□□□□ -0.17
TPM3-216ENST00000473036 CISHQ9NSE2 258 aa13.96□□□□□ -0.17
TPM3-216ENST00000473036 FANCLQ9NW38 375 aa13.96□□□□□ -0.17
TPM3-216ENST00000473036 AJAP1Q9UKB5 411 aaPredicted RBP13.96□□□□□ -0.17
TPM3-216ENST00000473036 NCANO14594 1321 aa13.95□□□□□ -0.18
TPM3-216ENST00000473036 PATJQ8NI35 1801 aa13.95□□□□□ -0.18
TPM3-216ENST00000473036 SYCE3A1L190 88 aa13.95□□□□□ -0.18
TPM3-216ENST00000473036 KCNJ18B7U540 433 aa13.95□□□□□ -0.18
TPM3-216ENST00000473036 RNF225M0QZC1 329 aaPredicted RBP13.95□□□□□ -0.18
TPM3-216ENST00000473036 P4HA2O15460 535 aa13.95□□□□□ -0.18
TPM3-216ENST00000473036 TADA3O75528 432 aa13.95□□□□□ -0.18
TPM3-216ENST00000473036 BEST1O76090 585 aa13.95□□□□□ -0.18
TPM3-216ENST00000473036 CALCAP01258 141 aa13.95□□□□□ -0.18
TPM3-216ENST00000473036 P4HA1P13674 534 aa13.95□□□□□ -0.18
TPM3-216ENST00000473036 MAGEA11P43364 429 aa13.95□□□□□ -0.18
TPM3-216ENST00000473036 ALDH1A3P47895 512 aa13.95□□□□□ -0.18
TPM3-216ENST00000473036 RAD23BP54727 409 aa13.95□□□□□ -0.18
TPM3-216ENST00000473036 ZNF445P59923 1031 aa13.95□□□□□ -0.18
TPM3-216ENST00000473036 USP46P62068 366 aa13.95□□□□□ -0.18
TPM3-216ENST00000473036 KCNJ12Q14500 433 aa13.95□□□□□ -0.18
TPM3-216ENST00000473036 ZNF394Q53GI3 561 aa13.95□□□□□ -0.18
TPM3-216ENST00000473036 TCP11X2Q5H9J9 407 aa13.95□□□□□ -0.18
TPM3-216ENST00000473036 STXBP5Q5T5C0 1151 aa13.95□□□□□ -0.18
TPM3-216ENST00000473036 GJB7Q6PEY0 223 aa13.95□□□□□ -0.18
TPM3-216ENST00000473036 RRAGAQ7L523 313 aa13.95□□□□□ -0.18
TPM3-216ENST00000473036 APTXQ7Z2E3 356 aaKnown RBP13.95□□□□□ -0.18
TPM3-216ENST00000473036 UNC93AQ86WB7 457 aa13.95□□□□□ -0.18
TPM3-216ENST00000473036 SPATA2LQ8IUW3 424 aaPredicted RBP13.95□□□□□ -0.18
TPM3-216ENST00000473036 DHX40Q8IX18 779 aaKnown RBP13.95□□□□□ -0.18
TPM3-216ENST00000473036 SLC4A11Q8NBS3 891 aa13.95□□□□□ -0.18
TPM3-216ENST00000473036 ZMIZ2Q8NF64 920 aa13.95□□□□□ -0.18
TPM3-216ENST00000473036 RSAD2Q8WXG1 361 aa13.95□□□□□ -0.18
TPM3-216ENST00000473036 ZNF512Q96ME7 567 aaPredicted RBP13.95□□□□□ -0.18
TPM3-216ENST00000473036 RPP25Q9BUL9 199 aaKnown RBP13.95□□□□□ -0.18
TPM3-216ENST00000473036 IMPG2Q9BZV3 1241 aa13.95□□□□□ -0.18
TPM3-216ENST00000473036 INTS2Q9H0H0 1204 aaKnown RBP13.95□□□□□ -0.18
TPM3-216ENST00000473036 SIX2Q9NPC8 291 aa13.95□□□□□ -0.18
TPM3-216ENST00000473036 EPS15L1Q9UBC2 864 aa13.95□□□□□ -0.18
TPM3-216ENST00000473036 MAGEC2Q9UBF1 373 aaPredicted RBP13.95□□□□□ -0.18
TPM3-216ENST00000473036 LIMD1Q9UGP4 676 aa13.95□□□□□ -0.18
TPM3-216ENST00000473036 MYL4P12829 197 aa13.94□□□□□ -0.18
TPM3-216ENST00000473036 LAMP2P13473 410 aa13.94□□□□□ -0.18
TPM3-216ENST00000473036 ZNF18P17022 549 aa13.94□□□□□ -0.18
TPM3-216ENST00000473036 GBP2P32456 591 aaPredicted RBP13.94□□□□□ -0.18
TPM3-216ENST00000473036 MTIF2P46199 727 aaKnown RBP13.94□□□□□ -0.18
TPM3-216ENST00000473036 EPHB3P54753 998 aa13.94□□□□□ -0.18
TPM3-216ENST00000473036 KCNMA1Q12791 1236 aa13.94□□□□□ -0.18
TPM3-216ENST00000473036 MAN2A1Q16706 1144 aa13.94□□□□□ -0.18
TPM3-216ENST00000473036 TPD52L1Q16890 204 aaPredicted RBP13.94□□□□□ -0.18
TPM3-216ENST00000473036 VWA3BQ502W6 1294 aa13.94□□□□□ -0.18
TPM3-216ENST00000473036 WDR44Q5JSH3 913 aa13.94□□□□□ -0.18
TPM3-216ENST00000473036 LRSAM1Q6UWE0 723 aa13.94□□□□□ -0.18
TPM3-216ENST00000473036 C4orf50Q6ZRC1 276 aa13.94□□□□□ -0.18
TPM3-216ENST00000473036 FAM35AQ86V20 835 aa13.94□□□□□ -0.18
TPM3-216ENST00000473036 SCN4BQ8IWT1 228 aa13.94□□□□□ -0.18
TPM3-216ENST00000473036 SLC2A14Q8TDB8 520 aa13.94□□□□□ -0.18
TPM3-216ENST00000473036 FGF14Q92915 247 aa13.94□□□□□ -0.18
TPM3-216ENST00000473036 ACSF2Q96CM8 615 aaPredicted RBP13.94□□□□□ -0.18
TPM3-216ENST00000473036 FAXDC2Q96IV6 333 aa13.94□□□□□ -0.18
TPM3-216ENST00000473036 KCNK16Q96T55 309 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms