RNA–Protein interactions for RNA: ENST00000470710.1

HDLBP-233, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-233ENST00000470710 DCP1BQ8IZD4 617 aaKnown RBP9.2□□□□□ -0.94
HDLBP-233ENST00000470710 SLC35F6Q8N357 371 aa9.2□□□□□ -0.94
HDLBP-233ENST00000470710 FIBCD1Q8N539 461 aa9.2□□□□□ -0.94
HDLBP-233ENST00000470710 LRRC57Q8N9N7 239 aa9.2□□□□□ -0.94
HDLBP-233ENST00000470710 C3orf20Q8ND61 904 aa9.2□□□□□ -0.94
HDLBP-233ENST00000470710 TPCN2Q8NHX9 752 aa9.2□□□□□ -0.94
HDLBP-233ENST00000470710 ZNF564Q8TBZ8 553 aaPredicted RBP9.2□□□□□ -0.94
HDLBP-233ENST00000470710 IPO4Q8TEX9 1081 aaKnown RBP9.2□□□□□ -0.94
HDLBP-233ENST00000470710 UBE2Q2Q8WVN8 375 aa9.2□□□□□ -0.94
HDLBP-233ENST00000470710 PIK3R5Q8WYR1 880 aa9.2□□□□□ -0.94
HDLBP-233ENST00000470710 MYLPFQ96A32 169 aa9.2□□□□□ -0.94
HDLBP-233ENST00000470710 C18orf8Q96DM3 657 aa9.2□□□□□ -0.94
HDLBP-233ENST00000470710 SMARCD1Q96GM5 515 aa9.2□□□□□ -0.94
HDLBP-233ENST00000470710 TMEM169Q96HH4 297 aa9.2□□□□□ -0.94
HDLBP-233ENST00000470710 PCED1BQ96HM7 432 aa9.2□□□□□ -0.94
HDLBP-233ENST00000470710 WDR24Q96S15 920 aa9.2□□□□□ -0.94
HDLBP-233ENST00000470710 CPXM1Q96SM3 734 aa9.2□□□□□ -0.94
HDLBP-233ENST00000470710 ZBED2Q9BTP6 218 aa9.2□□□□□ -0.94
HDLBP-233ENST00000470710 MED10Q9BTT4 135 aa9.2□□□□□ -0.94
HDLBP-233ENST00000470710 VN1R3Q9BXE9 311 aa9.2□□□□□ -0.94
HDLBP-233ENST00000470710 SLC4A5Q9BY07 1137 aa9.2□□□□□ -0.94
HDLBP-233ENST00000470710 UBXN6Q9BZV1 441 aa9.2□□□□□ -0.94
HDLBP-233ENST00000470710 MRPL47Q9HD33 250 aaKnown RBP9.2□□□□□ -0.94
HDLBP-233ENST00000470710 CHST7Q9NS84 486 aa9.2□□□□□ -0.94
HDLBP-233ENST00000470710 PARVAQ9NVD7 372 aa9.2□□□□□ -0.94
HDLBP-233ENST00000470710 CTTNBP2NLQ9P2B4 639 aa9.2□□□□□ -0.94
HDLBP-233ENST00000470710 COG5Q9UP83 839 aa9.2□□□□□ -0.94
HDLBP-233ENST00000470710 PCDHB12Q9Y5F1 795 aa9.2□□□□□ -0.94
HDLBP-233ENST00000470710 BACE2Q9Y5Z0 518 aa9.2□□□□□ -0.94
HDLBP-233ENST00000470710 CAPN6Q9Y6Q1 641 aa9.2□□□□□ -0.94
HDLBP-233ENST00000470710 FNDC1Q4ZHG4 1894 aaPredicted RBP9.19□□□□□ -0.94
HDLBP-233ENST00000470710 GRID2IPA4D2P6 1211 aa9.19□□□□□ -0.94
HDLBP-233ENST00000470710 CLDN5O00501 218 aa9.19□□□□□ -0.94
HDLBP-233ENST00000470710 ATMINO43313 823 aaPredicted RBP9.19□□□□□ -0.94
HDLBP-233ENST00000470710 BUB1O43683 1085 aa9.19□□□□□ -0.94
HDLBP-233ENST00000470710 SOD2P04179 222 aa9.19□□□□□ -0.94
HDLBP-233ENST00000470710 ERBB2P04626 1255 aa9.19□□□□□ -0.94
HDLBP-233ENST00000470710 SCNN1AP37088 669 aa9.19□□□□□ -0.94
HDLBP-233ENST00000470710 MAGEA10P43363 369 aaPredicted RBP9.19□□□□□ -0.94
HDLBP-233ENST00000470710 NOP2P46087 812 aaKnown RBP9.19□□□□□ -0.94
HDLBP-233ENST00000470710 NAP1L1P55209 391 aaKnown RBP9.19□□□□□ -0.94
HDLBP-233ENST00000470710 DSG1Q02413 1049 aa9.19□□□□□ -0.94
HDLBP-233ENST00000470710 TAP1Q03518 808 aa9.19□□□□□ -0.94
HDLBP-233ENST00000470710 MAMLD1Q13495 774 aa9.19□□□□□ -0.94
HDLBP-233ENST00000470710 NFE2Q16621 373 aaPredicted RBP9.19□□□□□ -0.94
HDLBP-233ENST00000470710 CFAP221Q4G0U5 840 aa9.19□□□□□ -0.94
HDLBP-233ENST00000470710 RTP2Q5QGT7 225 aa9.19□□□□□ -0.94
HDLBP-233ENST00000470710 C11orf63Q6NUN7 778 aa9.19□□□□□ -0.94
HDLBP-233ENST00000470710 PMF1Q6P1K2 205 aa9.19□□□□□ -0.94
HDLBP-233ENST00000470710 DNAJC24Q6P3W2 148 aa9.19□□□□□ -0.94
HDLBP-233ENST00000470710 SYT10Q6XYQ8 523 aa9.19□□□□□ -0.94
HDLBP-233ENST00000470710 C4orf50Q6ZRC1 276 aa9.19□□□□□ -0.94
HDLBP-233ENST00000470710 CLEC20AQ6ZU45 233 aa9.19□□□□□ -0.94
HDLBP-233ENST00000470710 TAS1R1Q7RTX1 841 aa9.19□□□□□ -0.94
HDLBP-233ENST00000470710 SLFN11Q7Z7L1 901 aa9.19□□□□□ -0.94
HDLBP-233ENST00000470710 LRRTM3Q86VH5 581 aa9.19□□□□□ -0.94
HDLBP-233ENST00000470710 XYLT1Q86Y38 959 aa9.19□□□□□ -0.94
HDLBP-233ENST00000470710 ZDHHC17Q8IUH5 632 aa9.19□□□□□ -0.94
HDLBP-233ENST00000470710 SYCE1Q8N0S2 351 aa9.19□□□□□ -0.94
HDLBP-233ENST00000470710 KIF18AQ8NI77 898 aa9.19□□□□□ -0.94
HDLBP-233ENST00000470710 KCTD13Q8WZ19 329 aa9.19□□□□□ -0.94
HDLBP-233ENST00000470710 MCRS1Q96EZ8 462 aa9.19□□□□□ -0.94
HDLBP-233ENST00000470710 FUBP3Q96I24 572 aaKnown RBP eCLIP9.19□□□□□ -0.94
HDLBP-233ENST00000470710 TMEM209Q96SK2 561 aa9.19□□□□□ -0.94
HDLBP-233ENST00000470710 NUP85Q9BW27 656 aa9.19□□□□□ -0.94
HDLBP-233ENST00000470710 SYNCQ9H7C4 482 aa9.19□□□□□ -0.94
HDLBP-233ENST00000470710 CSNK1G1Q9HCP0 422 aa9.19□□□□□ -0.94
HDLBP-233ENST00000470710 ABCB6Q9NP58 842 aa9.19□□□□□ -0.94
HDLBP-233ENST00000470710 PNPLA8Q9NP80 782 aa9.19□□□□□ -0.94
HDLBP-233ENST00000470710 OSGEPQ9NPF4 335 aa9.19□□□□□ -0.94
HDLBP-233ENST00000470710 KRT82Q9NSB4 513 aa9.19□□□□□ -0.94
HDLBP-233ENST00000470710 TMLHEQ9NVH6 421 aa9.19□□□□□ -0.94
HDLBP-233ENST00000470710 DNAI1Q9UI46 699 aa9.19□□□□□ -0.94
HDLBP-233ENST00000470710 LCMT1Q9UIC8 334 aa9.19□□□□□ -0.94
HDLBP-233ENST00000470710 FAM170AA1A519 330 aa9.18□□□□□ -0.94
HDLBP-233ENST00000470710 CTAGE9A4FU28 777 aa9.18□□□□□ -0.94
HDLBP-233ENST00000470710 SIGLEC16A6NMB1 481 aa9.18□□□□□ -0.94
HDLBP-233ENST00000470710 E5RJQ4 531 aa9.18□□□□□ -0.94
HDLBP-233ENST00000470710 TULP2O00295 520 aa9.18□□□□□ -0.94
HDLBP-233ENST00000470710 FANCGO15287 622 aa9.18□□□□□ -0.94
HDLBP-233ENST00000470710 TLL1O43897 1013 aa9.18□□□□□ -0.94
HDLBP-233ENST00000470710 BUB1BO60566 1050 aaPredicted RBP9.18□□□□□ -0.94
HDLBP-233ENST00000470710 PALMO75781 387 aa9.18□□□□□ -0.94
HDLBP-233ENST00000470710 AP1G2O75843 785 aa9.18□□□□□ -0.94
HDLBP-233ENST00000470710 CASQ1P31415 396 aa9.18□□□□□ -0.94
HDLBP-233ENST00000470710 MAGEA11P43364 429 aa9.18□□□□□ -0.94
HDLBP-233ENST00000470710 GPR17Q13304 367 aa9.18□□□□□ -0.94
HDLBP-233ENST00000470710 SLC39A12Q504Y0 691 aa9.18□□□□□ -0.94
HDLBP-233ENST00000470710 C2CD6Q53TS8 623 aa9.18□□□□□ -0.94
HDLBP-233ENST00000470710 PPP1R15BQ5SWA1 713 aa9.18□□□□□ -0.94
HDLBP-233ENST00000470710 CYP4A22Q5TCH4 519 aa9.18□□□□□ -0.94
HDLBP-233ENST00000470710 SLC8B1Q6J4K2 584 aa9.18□□□□□ -0.94
HDLBP-233ENST00000470710 CHRDL2Q6WN34 429 aa9.18□□□□□ -0.94
HDLBP-233ENST00000470710 PIGZQ86VD9 579 aa9.18□□□□□ -0.94
HDLBP-233ENST00000470710 CEP57Q86XR8 500 aa9.18□□□□□ -0.94
HDLBP-233ENST00000470710 SPATA2LQ8IUW3 424 aaPredicted RBP9.18□□□□□ -0.94
HDLBP-233ENST00000470710 TNS4Q8IZW8 715 aa9.18□□□□□ -0.94
HDLBP-233ENST00000470710 FEZF2Q8TBJ5 459 aa9.18□□□□□ -0.94
HDLBP-233ENST00000470710 C2orf15Q8WU43 125 aaKnown RBP9.18□□□□□ -0.94
HDLBP-233ENST00000470710 RIN2Q8WYP3 895 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms