RNA–Protein interactions for RNA: ENST00000470356.3

HMG20B-209, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-209ENST00000470356 GZF1Q9H116 711 aaPredicted RBP33.49■■■□□ 2.95
HMG20B-209ENST00000470356 TACC1O75410 805 aa33.48■■■□□ 2.95
HMG20B-209ENST00000470356 GNL1P36915 607 aaPredicted RBP33.48■■■□□ 2.95
HMG20B-209ENST00000470356 RUNX3Q13761 415 aa33.48■■■□□ 2.95
HMG20B-209ENST00000470356 SYNPOQ8N3V7 929 aa33.48■■■□□ 2.95
HMG20B-209ENST00000470356 GOLGA5Q8TBA6 731 aa33.48■■■□□ 2.95
HMG20B-209ENST00000470356 ZNF516Q92618 1163 aa33.48■■■□□ 2.95
HMG20B-209ENST00000470356 SPATA17Q96L03 361 aa33.48■■■□□ 2.95
HMG20B-209ENST00000470356 HPS4Q9NQG7 708 aa33.48■■■□□ 2.95
HMG20B-209ENST00000470356 NCDNQ9UBB6 729 aa33.48■■■□□ 2.95
HMG20B-209ENST00000470356 SMG5Q9UPR3 1016 aaKnown RBP33.48■■■□□ 2.95
HMG20B-209ENST00000470356 ACTN4O43707 911 aaKnown RBP33.47■■■□□ 2.95
HMG20B-209ENST00000470356 KLRC4O43908 158 aa33.47■■■□□ 2.95
HMG20B-209ENST00000470356 PAPSS2O95340 614 aaPredicted RBP33.47■■■□□ 2.95
HMG20B-209ENST00000470356 FOXK2Q01167 660 aa33.47■■■□□ 2.95
HMG20B-209ENST00000470356 WDR72Q3MJ13 1102 aa33.47■■■□□ 2.95
HMG20B-209ENST00000470356 CC2D1AQ6P1N0 951 aaPredicted RBP33.47■■■□□ 2.95
HMG20B-209ENST00000470356 Q6ZS52 159 aa33.47■■■□□ 2.95
HMG20B-209ENST00000470356 MYCBPAPQ8TBZ2 947 aa33.47■■■□□ 2.95
HMG20B-209ENST00000470356 PAGE5Q96GU1 130 aa33.47■■■□□ 2.95
HMG20B-209ENST00000470356 MRPL45Q9BRJ2 306 aaKnown RBP33.47■■■□□ 2.95
HMG20B-209ENST00000470356 SNX25Q9H3E2 840 aa33.47■■■□□ 2.95
HMG20B-209ENST00000470356 ATG2BQ96BY7 2078 aa33.46■■■□□ 2.95
HMG20B-209ENST00000470356 EXOC3O60645 756 aa33.46■■■□□ 2.95
HMG20B-209ENST00000470356 STAU1O95793 577 aaKnown RBP33.46■■■□□ 2.95
HMG20B-209ENST00000470356 BDNFP23560 247 aa33.46■■■□□ 2.95
HMG20B-209ENST00000470356 FSIP1Q8NA03 581 aa33.46■■■□□ 2.95
HMG20B-209ENST00000470356 RIN3Q8TB24 985 aa33.46■■■□□ 2.95
HMG20B-209ENST00000470356 EBF3Q9H4W6 596 aa33.46■■■□□ 2.95
HMG20B-209ENST00000470356 TRAV19A0A0A6YYK7 116 aa33.45■■■□□ 2.95
HMG20B-209ENST00000470356 USP17L7P0C7H9 530 aa33.45■■■□□ 2.95
HMG20B-209ENST00000470356 CMA1P23946 247 aa33.45■■■□□ 2.95
HMG20B-209ENST00000470356 TNNC1P63316 161 aa33.45■■■□□ 2.95
HMG20B-209ENST00000470356 CYP27A1Q02318 531 aa33.45■■■□□ 2.95
HMG20B-209ENST00000470356 FAM160A1Q05DH4 1040 aa33.45■■■□□ 2.95
HMG20B-209ENST00000470356 STK4Q13043 487 aa33.45■■■□□ 2.95
HMG20B-209ENST00000470356 PSMD2Q13200 908 aa33.45■■■□□ 2.95
HMG20B-209ENST00000470356 TRPC3Q13507 836 aa33.45■■■□□ 2.95
HMG20B-209ENST00000470356 TRIM68Q6AZZ1 485 aa33.45■■■□□ 2.95
HMG20B-209ENST00000470356 PCED1BQ96HM7 432 aa33.45■■■□□ 2.95
HMG20B-209ENST00000470356 SLC22A12Q96S37 553 aa33.45■■■□□ 2.95
HMG20B-209ENST00000470356 CYP2S1Q96SQ9 504 aa33.45■■■□□ 2.95
HMG20B-209ENST00000470356 TRPC7Q9HCX4 862 aa33.45■■■□□ 2.95
HMG20B-209ENST00000470356 USP25Q9UHP3 1055 aa33.45■■■□□ 2.95
HMG20B-209ENST00000470356 OTOL1A6NHN0 477 aaPredicted RBP33.44■■■□□ 2.94
HMG20B-209ENST00000470356 ATICP31939 592 aa33.44■■■□□ 2.94
HMG20B-209ENST00000470356 GRIK1P39086 918 aa33.44■■■□□ 2.94
HMG20B-209ENST00000470356 MYL6P60660 151 aa33.44■■■□□ 2.94
HMG20B-209ENST00000470356 PDGFRLQ15198 375 aa33.44■■■□□ 2.94
HMG20B-209ENST00000470356 OR6B3Q8NGW1 331 aa33.44■■■□□ 2.94
HMG20B-209ENST00000470356 SECISBP2LQ93073 1101 aaKnown RBP33.44■■■□□ 2.94
HMG20B-209ENST00000470356 XYLT2Q9H1B5 865 aa33.44■■■□□ 2.94
HMG20B-209ENST00000470356 EXOC1Q9NV70 894 aa33.44■■■□□ 2.94
HMG20B-209ENST00000470356 GCNT4Q9P109 453 aa33.44■■■□□ 2.94
HMG20B-209ENST00000470356 NME7Q9Y5B8 376 aa33.44■■■□□ 2.94
HMG20B-209ENST00000470356 ERMP1Q7Z2K6 904 aa33.43■■■□□ 2.94
HMG20B-209ENST00000470356 TMEM174Q8WUU8 243 aa33.43■■■□□ 2.94
HMG20B-209ENST00000470356 SYAP1Q96A49 352 aaPredicted RBP33.43■■■□□ 2.94
HMG20B-209ENST00000470356 A0A1B0GVL5 298 aa33.42■■■□□ 2.94
HMG20B-209ENST00000470356 K7ESF4 209 aa33.42■■■□□ 2.94
HMG20B-209ENST00000470356 TRDMT1O14717 391 aaKnown RBP33.42■■■□□ 2.94
HMG20B-209ENST00000470356 CKMP06732 381 aa33.42■■■□□ 2.94
HMG20B-209ENST00000470356 ARSAP15289 507 aa33.42■■■□□ 2.94
HMG20B-209ENST00000470356 PFKFB1P16118 471 aa33.42■■■□□ 2.94
HMG20B-209ENST00000470356 ANXA13P27216 316 aa33.42■■■□□ 2.94
HMG20B-209ENST00000470356 AMPD2Q01433 879 aa33.42■■■□□ 2.94
HMG20B-209ENST00000470356 KMT5BQ4FZB7 885 aa33.42■■■□□ 2.94
HMG20B-209ENST00000470356 TMEM196Q5HYL7 178 aa33.42■■■□□ 2.94
HMG20B-209ENST00000470356 MDH1BQ5I0G3 518 aa33.42■■■□□ 2.94
HMG20B-209ENST00000470356 DENND5BQ6ZUT9 1274 aa33.42■■■□□ 2.94
HMG20B-209ENST00000470356 GPR161Q8N6U8 529 aaKnown RBP33.42■■■□□ 2.94
HMG20B-209ENST00000470356 KIAA0895Q8NCT3 520 aa33.42■■■□□ 2.94
HMG20B-209ENST00000470356 PLEKHO2Q8TD55 490 aa33.42■■■□□ 2.94
HMG20B-209ENST00000470356 RMDN1Q96DB5 314 aa33.42■■■□□ 2.94
HMG20B-209ENST00000470356 CHFRQ96EP1 664 aa33.42■■■□□ 2.94
HMG20B-209ENST00000470356 DMAC2Q9NW81 257 aa33.42■■■□□ 2.94
HMG20B-209ENST00000470356 EHD2Q9NZN4 543 aa33.42■■■□□ 2.94
HMG20B-209ENST00000470356 TRIM66O15016 1216 aa33.41■■■□□ 2.94
HMG20B-209ENST00000470356 PHACTR2O75167 634 aa33.41■■■□□ 2.94
HMG20B-209ENST00000470356 MYL1P05976 194 aa33.41■■■□□ 2.94
HMG20B-209ENST00000470356 PTPN1P18031 435 aaKnown RBP33.41■■■□□ 2.94
HMG20B-209ENST00000470356 CASP4P49662 377 aa33.41■■■□□ 2.94
HMG20B-209ENST00000470356 AP3M2P53677 418 aa33.41■■■□□ 2.94
HMG20B-209ENST00000470356 CLDN10P78369 228 aa33.41■■■□□ 2.94
HMG20B-209ENST00000470356 MTF1Q14872 753 aa33.41■■■□□ 2.94
HMG20B-209ENST00000470356 ZNF77Q15935 545 aa33.41■■■□□ 2.94
HMG20B-209ENST00000470356 SLC9A9Q8IVB4 645 aa33.41■■■□□ 2.94
HMG20B-209ENST00000470356 ARL14EPQ8N8R7 260 aaPredicted RBP33.41■■■□□ 2.94
HMG20B-209ENST00000470356 PARD3BQ8TEW8 1205 aa33.41■■■□□ 2.94
HMG20B-209ENST00000470356 C8orf48Q96LL4 319 aa33.41■■■□□ 2.94
HMG20B-209ENST00000470356 NXF1Q9UBU9 619 aaKnown RBP33.41■■■□□ 2.94
HMG20B-209ENST00000470356 C2orf78A6NCI8 922 aa33.4■■■□□ 2.94
HMG20B-209ENST00000470356 HDCP19113 662 aa33.4■■■□□ 2.94
HMG20B-209ENST00000470356 HOXA6P31267 233 aa33.4■■■□□ 2.94
HMG20B-209ENST00000470356 GRSF1Q12849 480 aaKnown RBP eCLIP33.4■■■□□ 2.94
HMG20B-209ENST00000470356 SPATA32Q96LK8 384 aa33.4■■■□□ 2.94
HMG20B-209ENST00000470356 TTLL2Q9BWV7 592 aa33.4■■■□□ 2.94
HMG20B-209ENST00000470356 KCTD10Q9H3F6 313 aa33.4■■■□□ 2.94
HMG20B-209ENST00000470356 VRTNQ9H8Y1 702 aa33.4■■■□□ 2.94
HMG20B-209ENST00000470356 C2orf42Q9NWW7 574 aa33.4■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms