RNA–Protein interactions for RNA: ENST00000469896.1

COMMD2-202, Transcript of COMM domain containing 2, humanhuman

TSL 1 (best)

Gene COMMD2, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-202ENST00000469896 TRMT11Q7Z4G4 463 aaKnown RBP12.21□□□□□ -0.45
COMMD2-202ENST00000469896 MON1AQ86VX9 555 aa12.21□□□□□ -0.45
COMMD2-202ENST00000469896 SPACA3Q8IXA5 215 aa12.21□□□□□ -0.45
COMMD2-202ENST00000469896 TTC9BQ8N6N2 239 aa12.21□□□□□ -0.45
COMMD2-202ENST00000469896 KRI1Q8N9T8 703 aaKnown RBP12.21□□□□□ -0.45
COMMD2-202ENST00000469896 MCPH1Q8NEM0 835 aa12.21□□□□□ -0.45
COMMD2-202ENST00000469896 DEPTORQ8TB45 409 aa12.21□□□□□ -0.45
COMMD2-202ENST00000469896 SPATA18Q8TC71 538 aa12.21□□□□□ -0.45
COMMD2-202ENST00000469896 TMEM176AQ96HP8 235 aa12.21□□□□□ -0.45
COMMD2-202ENST00000469896 SEMA4CQ9C0C4 833 aa12.21□□□□□ -0.45
COMMD2-202ENST00000469896 NRSN2Q9GZP1 204 aa12.21□□□□□ -0.45
COMMD2-202ENST00000469896 CALCOCO1Q9P1Z2 691 aa12.21□□□□□ -0.45
COMMD2-202ENST00000469896 BRPF3Q9ULD4 1205 aa12.21□□□□□ -0.45
COMMD2-202ENST00000469896 DOPEY1Q5JWR5 2465 aa12.21□□□□□ -0.45
COMMD2-202ENST00000469896 IGHV1OR15-9A0A0B4J2B8 117 aa12.2□□□□□ -0.46
COMMD2-202ENST00000469896 KLF18A0A0U1RQI7 1052 aa12.2□□□□□ -0.46
COMMD2-202ENST00000469896 M0QZQ0 153 aa12.2□□□□□ -0.46
COMMD2-202ENST00000469896 SGSM2O43147 1006 aa12.2□□□□□ -0.46
COMMD2-202ENST00000469896 SLC37A4O43826 429 aa12.2□□□□□ -0.46
COMMD2-202ENST00000469896 LYPLA2O95372 231 aa12.2□□□□□ -0.46
COMMD2-202ENST00000469896 LARGE1O95461 756 aa12.2□□□□□ -0.46
COMMD2-202ENST00000469896 NMT1P30419 496 aaKnown RBP12.2□□□□□ -0.46
COMMD2-202ENST00000469896 HSPA4P34932 840 aa12.2□□□□□ -0.46
COMMD2-202ENST00000469896 ACTN2P35609 894 aa12.2□□□□□ -0.46
COMMD2-202ENST00000469896 OPRD1P41143 372 aa12.2□□□□□ -0.46
COMMD2-202ENST00000469896 GRM5P41594 1212 aa12.2□□□□□ -0.46
COMMD2-202ENST00000469896 NLRP12P59046 1061 aa12.2□□□□□ -0.46
COMMD2-202ENST00000469896 CCDC173Q0VFZ6 552 aa12.2□□□□□ -0.46
COMMD2-202ENST00000469896 KCNH2Q12809 1159 aa12.2□□□□□ -0.46
COMMD2-202ENST00000469896 OVOS1Q6IE37 1185 aa12.2□□□□□ -0.46
COMMD2-202ENST00000469896 ALKAL1Q6UXT8 129 aa12.2□□□□□ -0.46
COMMD2-202ENST00000469896 MAEAQ7L5Y9 396 aa12.2□□□□□ -0.46
COMMD2-202ENST00000469896 RIN3Q8TB24 985 aa12.2□□□□□ -0.46
COMMD2-202ENST00000469896 ZNF419Q96HQ0 510 aaPredicted RBP12.2□□□□□ -0.46
COMMD2-202ENST00000469896 LGMNQ99538 433 aa12.2□□□□□ -0.46
COMMD2-202ENST00000469896 FAM117AQ9C073 453 aa12.2□□□□□ -0.46
COMMD2-202ENST00000469896 KCNMB3Q9NPA1 279 aa12.2□□□□□ -0.46
COMMD2-202ENST00000469896 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.2□□□□□ -0.46
COMMD2-202ENST00000469896 VPS54Q9P1Q0 977 aa12.2□□□□□ -0.46
COMMD2-202ENST00000469896 ANKMY1Q9P2S6 941 aa12.2□□□□□ -0.46
COMMD2-202ENST00000469896 FNDC3AQ9Y2H6 1198 aaKnown RBP12.2□□□□□ -0.46
COMMD2-202ENST00000469896 USP20Q9Y2K6 914 aa12.2□□□□□ -0.46
COMMD2-202ENST00000469896 TIMM13Q9Y5L4 95 aaPredicted RBP12.2□□□□□ -0.46
COMMD2-202ENST00000469896 TSC2P49815 1807 aa12.2□□□□□ -0.46
COMMD2-202ENST00000469896 KIAA1549LQ6ZVL6 1849 aa12.2□□□□□ -0.46
COMMD2-202ENST00000469896 NID2Q14112 1375 aa12.19□□□□□ -0.46
COMMD2-202ENST00000469896 PLXND1Q9Y4D7 1925 aa12.19□□□□□ -0.46
COMMD2-202ENST00000469896 MEI4A8MW99 385 aa12.19□□□□□ -0.46
COMMD2-202ENST00000469896 APODP05090 189 aa12.19□□□□□ -0.46
COMMD2-202ENST00000469896 CKMP06732 381 aa12.19□□□□□ -0.46
COMMD2-202ENST00000469896 USP17L7P0C7H9 530 aa12.19□□□□□ -0.46
COMMD2-202ENST00000469896 CDK4P11802 303 aa12.19□□□□□ -0.46
COMMD2-202ENST00000469896 ATF6P18850 670 aa12.19□□□□□ -0.46
COMMD2-202ENST00000469896 CHMLP26374 656 aa12.19□□□□□ -0.46
COMMD2-202ENST00000469896 ADD1P35611 737 aaKnown RBP12.19□□□□□ -0.46
COMMD2-202ENST00000469896 GRK6P43250 576 aa12.19□□□□□ -0.46
COMMD2-202ENST00000469896 RARRES1P49788 294 aa12.19□□□□□ -0.46
COMMD2-202ENST00000469896 EFNA5P52803 228 aa12.19□□□□□ -0.46
COMMD2-202ENST00000469896 OSTNP61366 133 aa12.19□□□□□ -0.46
COMMD2-202ENST00000469896 ZNF77Q15935 545 aa12.19□□□□□ -0.46
COMMD2-202ENST00000469896 PTPRNQ16849 979 aa12.19□□□□□ -0.46
COMMD2-202ENST00000469896 INAVAQ3KP66 663 aa12.19□□□□□ -0.46
COMMD2-202ENST00000469896 DBX2Q6ZNG2 339 aa12.19□□□□□ -0.46
COMMD2-202ENST00000469896 C18orf25Q96B23 403 aaPredicted RBP12.19□□□□□ -0.46
COMMD2-202ENST00000469896 YTHDC1Q96MU7 727 aaKnown RBP12.19□□□□□ -0.46
COMMD2-202ENST00000469896 ZMAT2Q96NC0 199 aaKnown RBP12.19□□□□□ -0.46
COMMD2-202ENST00000469896 ACAP3Q96P50 834 aa12.19□□□□□ -0.46
COMMD2-202ENST00000469896 PNKPQ96T60 521 aa12.19□□□□□ -0.46
COMMD2-202ENST00000469896 CCDC113Q9H0I3 377 aa12.19□□□□□ -0.46
COMMD2-202ENST00000469896 TMEM206Q9H813 350 aa12.19□□□□□ -0.46
COMMD2-202ENST00000469896 TTC12Q9H892 705 aaPredicted RBP12.19□□□□□ -0.46
COMMD2-202ENST00000469896 IL21RQ9HBE5 538 aa12.19□□□□□ -0.46
COMMD2-202ENST00000469896 GPRC5CQ9NQ84 441 aa12.19□□□□□ -0.46
COMMD2-202ENST00000469896 SH3GLB2Q9NR46 395 aa12.19□□□□□ -0.46
COMMD2-202ENST00000469896 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.19□□□□□ -0.46
COMMD2-202ENST00000469896 NFE2L3Q9Y4A8 694 aa12.19□□□□□ -0.46
COMMD2-202ENST00000469896 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.19□□□□□ -0.46
COMMD2-202ENST00000469896 FLNCQ14315 2725 aa12.19□□□□□ -0.46
COMMD2-202ENST00000469896 PTPRDP23468 1912 aa12.19□□□□□ -0.46
COMMD2-202ENST00000469896 TRAV19A0A0A6YYK7 116 aa12.18□□□□□ -0.46
COMMD2-202ENST00000469896 ADAM23O75077 832 aa12.18□□□□□ -0.46
COMMD2-202ENST00000469896 SLITRK3O94933 977 aa12.18□□□□□ -0.46
COMMD2-202ENST00000469896 KAT7O95251 611 aa12.18□□□□□ -0.46
COMMD2-202ENST00000469896 GCFC2P16383 781 aaKnown RBP12.18□□□□□ -0.46
COMMD2-202ENST00000469896 NAMPTP43490 491 aa12.18□□□□□ -0.46
COMMD2-202ENST00000469896 NUCB1Q02818 461 aa12.18□□□□□ -0.46
COMMD2-202ENST00000469896 USP4Q13107 963 aa12.18□□□□□ -0.46
COMMD2-202ENST00000469896 RTP5Q14D33 572 aa12.18□□□□□ -0.46
COMMD2-202ENST00000469896 PPP2R5AQ15172 486 aa12.18□□□□□ -0.46
COMMD2-202ENST00000469896 HLA-BQ31612 363 aa12.18□□□□□ -0.46
COMMD2-202ENST00000469896 DSTYKQ6XUX3 929 aa12.18□□□□□ -0.46
COMMD2-202ENST00000469896 TMEM150AQ86TG1 271 aa12.18□□□□□ -0.46
COMMD2-202ENST00000469896 SMC5Q8IY18 1101 aa12.18□□□□□ -0.46
COMMD2-202ENST00000469896 GIPC2Q8TF65 315 aa12.18□□□□□ -0.46
COMMD2-202ENST00000469896 DRC1Q96MC2 740 aa12.18□□□□□ -0.46
COMMD2-202ENST00000469896 TRIM4Q9C037 500 aa12.18□□□□□ -0.46
COMMD2-202ENST00000469896 TRPC7Q9HCX4 862 aa12.18□□□□□ -0.46
COMMD2-202ENST00000469896 KCNK4Q9NYG8 393 aa12.18□□□□□ -0.46
COMMD2-202ENST00000469896 CNTN3Q9P232 1028 aa12.18□□□□□ -0.46
COMMD2-202ENST00000469896 PCDHA4Q9UN74 947 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms