RNA–Protein interactions for RNA: ENST00000469762.5

SMC4-210, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 3,998 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-210ENST00000469762 CHSY1Q86X52 802 aa10.79□□□□□ -0.68
SMC4-210ENST00000469762 RMDN3Q96TC7 470 aa10.79□□□□□ -0.68
SMC4-210ENST00000469762 TSSK1BQ9BXA7 367 aa10.79□□□□□ -0.68
SMC4-210ENST00000469762 POLR3FQ9H1D9 316 aaPredicted RBP10.79□□□□□ -0.68
SMC4-210ENST00000469762 AGO2Q9UKV8 859 aaKnown RBP10.79□□□□□ -0.68
SMC4-210ENST00000469762 LCTP09848 1927 aa10.79□□□□□ -0.68
SMC4-210ENST00000469762 ANKRD33BA6NCL7 494 aa10.78□□□□□ -0.68
SMC4-210ENST00000469762 FAM189A1O60320 539 aa10.78□□□□□ -0.68
SMC4-210ENST00000469762 FAM155BO75949 473 aa10.78□□□□□ -0.68
SMC4-210ENST00000469762 SWSAP1Q6NVH7 229 aa10.78□□□□□ -0.68
SMC4-210ENST00000469762 LRRC74BQ6ZQY2 392 aa10.78□□□□□ -0.68
SMC4-210ENST00000469762 USP37Q86T82 979 aa10.78□□□□□ -0.68
SMC4-210ENST00000469762 CFAP61Q8NHU2 1237 aa10.78□□□□□ -0.68
SMC4-210ENST00000469762 JOSD2Q8TAC2 188 aa10.78□□□□□ -0.68
SMC4-210ENST00000469762 DTX3LQ8TDB6 740 aa10.78□□□□□ -0.68
SMC4-210ENST00000469762 ZNF341Q9BYN7 854 aa10.78□□□□□ -0.68
SMC4-210ENST00000469762 PHACTR1Q9C0D0 580 aa10.78□□□□□ -0.68
SMC4-210ENST00000469762 C20orf27Q9GZN8 174 aa10.78□□□□□ -0.68
SMC4-210ENST00000469762 PLA2G4CQ9UP65 541 aa10.78□□□□□ -0.68
SMC4-210ENST00000469762 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.78□□□□□ -0.68
SMC4-210ENST00000469762 UTRNP46939 3433 aa10.78□□□□□ -0.68
SMC4-210ENST00000469762 TBC1D12O60347 775 aa10.78□□□□□ -0.68
SMC4-210ENST00000469762 LRCH4O75427 683 aa10.78□□□□□ -0.68
SMC4-210ENST00000469762 TGDSO95455 350 aa10.78□□□□□ -0.68
SMC4-210ENST00000469762 RFC1P35251 1148 aaPredicted RBP10.78□□□□□ -0.68
SMC4-210ENST00000469762 FAAP100Q0VG06 881 aa10.78□□□□□ -0.68
SMC4-210ENST00000469762 GNPTABQ3T906 1256 aa10.78□□□□□ -0.68
SMC4-210ENST00000469762 CIAPIN1Q6FI81 312 aa10.78□□□□□ -0.68
SMC4-210ENST00000469762 IRGCQ6NXR0 463 aa10.78□□□□□ -0.68
SMC4-210ENST00000469762 ATP11CQ8NB49 1132 aa10.78□□□□□ -0.68
SMC4-210ENST00000469762 BICD1Q96G01 975 aa10.78□□□□□ -0.68
SMC4-210ENST00000469762 FAM111AQ96PZ2 611 aa10.78□□□□□ -0.68
SMC4-210ENST00000469762 CYP26B1Q9NR63 512 aa10.78□□□□□ -0.68
SMC4-210ENST00000469762 SPATS2LQ9NUQ6 558 aaKnown RBP10.78□□□□□ -0.68
SMC4-210ENST00000469762 STX18Q9P2W9 335 aaKnown RBP10.78□□□□□ -0.68
SMC4-210ENST00000469762 KAT6AQ92794 2004 aa10.78□□□□□ -0.68
SMC4-210ENST00000469762 TCRBV9S1A1TA0A576 114 aa10.78□□□□□ -0.68
SMC4-210ENST00000469762 GNAT1P11488 350 aa10.78□□□□□ -0.68
SMC4-210ENST00000469762 MAP3K10Q02779 954 aa10.78□□□□□ -0.68
SMC4-210ENST00000469762 SLC34A1Q06495 639 aa10.78□□□□□ -0.68
SMC4-210ENST00000469762 KRT72Q14CN4 511 aa10.78□□□□□ -0.68
SMC4-210ENST00000469762 FAM91A1Q658Y4 838 aa10.78□□□□□ -0.68
SMC4-210ENST00000469762 TEKT4Q8WW24 435 aa10.78□□□□□ -0.68
SMC4-210ENST00000469762 FNBP1Q96RU3 617 aa10.78□□□□□ -0.68
SMC4-210ENST00000469762 RBAKQ9NYW8 714 aaPredicted RBP10.78□□□□□ -0.68
SMC4-210ENST00000469762 STOML1Q9UBI4 398 aa10.78□□□□□ -0.68
SMC4-210ENST00000469762 STRIP2Q9ULQ0 834 aa10.78□□□□□ -0.68
SMC4-210ENST00000469762 A0A0B4J269 797 aa10.77□□□□□ -0.68
SMC4-210ENST00000469762 HNRNPCL1O60812 293 aaKnown RBP10.77□□□□□ -0.68
SMC4-210ENST00000469762 TROVE2P10155 538 aaKnown RBP eCLIP10.77□□□□□ -0.681e-12■■■■■ 61.2
SMC4-210ENST00000469762 CHRNA5P30532 468 aa10.77□□□□□ -0.68
SMC4-210ENST00000469762 ARFIP2P53365 341 aa10.77□□□□□ -0.68
SMC4-210ENST00000469762 MUM1Q2TAK8 710 aa10.77□□□□□ -0.68
SMC4-210ENST00000469762 KBTBD12Q3ZCT8 623 aa10.77□□□□□ -0.68
SMC4-210ENST00000469762 FYB2Q5VWT5 728 aa10.77□□□□□ -0.68
SMC4-210ENST00000469762 VSIG10LQ86VR7 867 aa10.77□□□□□ -0.68
SMC4-210ENST00000469762 MCF2L2Q86YR7 1114 aa10.77□□□□□ -0.68
SMC4-210ENST00000469762 LMNTD2Q8IXW0 634 aa10.77□□□□□ -0.68
SMC4-210ENST00000469762 NLGN1Q8N2Q7 840 aa10.77□□□□□ -0.68
SMC4-210ENST00000469762 MECRQ9BV79 373 aa10.77□□□□□ -0.68
SMC4-210ENST00000469762 TRIM55Q9BYV6 548 aa10.77□□□□□ -0.68
SMC4-210ENST00000469762 LRCH1Q9Y2L9 728 aa10.77□□□□□ -0.68
SMC4-210ENST00000469762 C2CD2Q9Y426 696 aa10.77□□□□□ -0.68
SMC4-210ENST00000469762 TEX264Q9Y6I9 313 aa10.77□□□□□ -0.68
SMC4-210ENST00000469762 FCHO1O14526 889 aa10.77□□□□□ -0.69
SMC4-210ENST00000469762 GYG2O15488 501 aa10.77□□□□□ -0.69
SMC4-210ENST00000469762 CST8O60676 142 aa10.77□□□□□ -0.69
SMC4-210ENST00000469762 AVILO75366 819 aa10.77□□□□□ -0.69
SMC4-210ENST00000469762 DGAT1O75907 488 aa10.77□□□□□ -0.69
SMC4-210ENST00000469762 IL1BP01584 269 aa10.77□□□□□ -0.69
SMC4-210ENST00000469762 PIGRP01833 764 aa10.77□□□□□ -0.69
SMC4-210ENST00000469762 LMNAP02545 664 aaKnown RBP10.77□□□□□ -0.69
SMC4-210ENST00000469762 MYL2P10916 166 aa10.77□□□□□ -0.69
SMC4-210ENST00000469762 CDH5P33151 784 aaPredicted RBP10.77□□□□□ -0.69
SMC4-210ENST00000469762 CETN2P41208 172 aa10.77□□□□□ -0.69
SMC4-210ENST00000469762 TNFSF9P41273 254 aa10.77□□□□□ -0.69
SMC4-210ENST00000469762 CPA2P48052 419 aa10.77□□□□□ -0.69
SMC4-210ENST00000469762 LIG4P49917 911 aa10.77□□□□□ -0.69
SMC4-210ENST00000469762 PLCB3Q01970 1234 aa10.77□□□□□ -0.69
SMC4-210ENST00000469762 ZNF394Q53GI3 561 aa10.77□□□□□ -0.69
SMC4-210ENST00000469762 SYCP2LQ5T4T6 812 aa10.77□□□□□ -0.69
SMC4-210ENST00000469762 TMEM130Q8N3G9 435 aa10.77□□□□□ -0.69
SMC4-210ENST00000469762 SLC44A1Q8WWI5 657 aa10.77□□□□□ -0.69
SMC4-210ENST00000469762 TMEM143Q96AN5 459 aa10.77□□□□□ -0.69
SMC4-210ENST00000469762 CGRRF1Q99675 332 aa10.77□□□□□ -0.69
SMC4-210ENST00000469762 TARS2Q9BW92 718 aaKnown RBP10.77□□□□□ -0.69
SMC4-210ENST00000469762 CHMP2BQ9UQN3 213 aa10.77□□□□□ -0.69
SMC4-210ENST00000469762 TNS1Q9HBL0 1735 aaKnown RBP10.77□□□□□ -0.69
SMC4-210ENST00000469762 PYGBP11216 843 aa10.77□□□□□ -0.69
SMC4-210ENST00000469762 ELK3P41970 407 aa10.77□□□□□ -0.69
SMC4-210ENST00000469762 RAB27AP51159 221 aa10.77□□□□□ -0.69
SMC4-210ENST00000469762 MRPS5P82675 430 aaKnown RBP10.77□□□□□ -0.69
SMC4-210ENST00000469762 PRKCEQ02156 737 aa10.77□□□□□ -0.69
SMC4-210ENST00000469762 AP1B1Q10567 949 aa10.77□□□□□ -0.69
SMC4-210ENST00000469762 NCOA4Q13772 614 aa10.77□□□□□ -0.69
SMC4-210ENST00000469762 RCN2Q14257 317 aa10.77□□□□□ -0.69
SMC4-210ENST00000469762 RAB6CQ53S08 254 aa10.77□□□□□ -0.69
SMC4-210ENST00000469762 RFX8Q6ZV50 586 aa10.77□□□□□ -0.69
SMC4-210ENST00000469762 BBS12Q6ZW61 710 aa10.77□□□□□ -0.69
SMC4-210ENST00000469762 KCNN1Q92952 543 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms