RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 CACNA1FO60840 1977 aa5.66□□□□□ -1.5
VPS8-219ENST00000469479 ZFP36P26651 326 aaKnown RBP5.66□□□□□ -1.5
VPS8-219ENST00000469479 RFC2P35250 354 aa5.66□□□□□ -1.5
VPS8-219ENST00000469479 KIR2DL3P43628 341 aa5.66□□□□□ -1.5
VPS8-219ENST00000469479 RASGRF1Q13972 1273 aa5.66□□□□□ -1.5
VPS8-219ENST00000469479 TMED8Q6PL24 325 aaPredicted RBP5.66□□□□□ -1.5
VPS8-219ENST00000469479 SLC4A10Q6U841 1118 aa5.66□□□□□ -1.5
VPS8-219ENST00000469479 MICALCLQ6ZW33 695 aa5.66□□□□□ -1.5
VPS8-219ENST00000469479 KLHDC9Q8NEP7 349 aa5.66□□□□□ -1.5
VPS8-219ENST00000469479 KAZALD1Q96I82 304 aa5.66□□□□□ -1.5
VPS8-219ENST00000469479 DYDC2Q96IM9 177 aa5.66□□□□□ -1.5
VPS8-219ENST00000469479 RPAP3Q9H6T3 665 aaPredicted RBP5.66□□□□□ -1.5
VPS8-219ENST00000469479 UBE2ZQ9H832 354 aaPredicted RBP5.66□□□□□ -1.5
VPS8-219ENST00000469479 CABP5Q9NP86 173 aa5.66□□□□□ -1.5
VPS8-219ENST00000469479 POLR3BQ9NW08 1133 aaPredicted RBP5.66□□□□□ -1.5
VPS8-219ENST00000469479 EIF2B4Q9UI10 523 aaKnown RBP5.66□□□□□ -1.5
VPS8-219ENST00000469479 WDR87Q6ZQQ6 2873 aa5.66□□□□□ -1.5
VPS8-219ENST00000469479 SYNRGQ9UMZ2 1314 aa5.66□□□□□ -1.5
VPS8-219ENST00000469479 MYH13Q9UKX3 1938 aa5.66□□□□□ -1.5
VPS8-219ENST00000469479 USP34Q70CQ2 3546 aa5.65□□□□□ -1.5
VPS8-219ENST00000469479 TRIOO75962 3097 aa5.65□□□□□ -1.5
VPS8-219ENST00000469479 MYO9BQ13459 2157 aa5.65□□□□□ -1.5
VPS8-219ENST00000469479 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.65□□□□□ -1.5
VPS8-219ENST00000469479 TMEM200CA6NKL6 621 aa5.65□□□□□ -1.5
VPS8-219ENST00000469479 PROB1E7EW31 1015 aa5.65□□□□□ -1.5
VPS8-219ENST00000469479 MTSS1O43312 755 aa5.65□□□□□ -1.5
VPS8-219ENST00000469479 RASGRP1O95267 797 aa5.65□□□□□ -1.5
VPS8-219ENST00000469479 PRLP01236 227 aa5.65□□□□□ -1.5
VPS8-219ENST00000469479 GH2P01242 217 aa5.65□□□□□ -1.5
VPS8-219ENST00000469479 CD4P01730 458 aa5.65□□□□□ -1.5
VPS8-219ENST00000469479 CA3P07451 260 aa5.65□□□□□ -1.5
VPS8-219ENST00000469479 NBPF7P0C2Y1 421 aaPredicted RBP5.65□□□□□ -1.5
VPS8-219ENST00000469479 SUPT20HL2P0C7V6 817 aa5.65□□□□□ -1.5
VPS8-219ENST00000469479 HK1P19367 917 aa5.65□□□□□ -1.5
VPS8-219ENST00000469479 IL15P40933 162 aaPredicted RBP5.65□□□□□ -1.5
VPS8-219ENST00000469479 PHKA1P46020 1223 aa5.65□□□□□ -1.5
VPS8-219ENST00000469479 FNTBP49356 437 aa5.65□□□□□ -1.5
VPS8-219ENST00000469479 ELLP55199 621 aaPredicted RBP5.65□□□□□ -1.5
VPS8-219ENST00000469479 SLC6A3Q01959 620 aa5.65□□□□□ -1.5
VPS8-219ENST00000469479 RAB33AQ14088 237 aa5.65□□□□□ -1.5
VPS8-219ENST00000469479 KCTD2Q14681 263 aa5.65□□□□□ -1.5
VPS8-219ENST00000469479 CCSAPQ6IQ19 270 aaPredicted RBP5.65□□□□□ -1.5
VPS8-219ENST00000469479 BMP8AQ7Z5Y6 402 aa5.65□□□□□ -1.5
VPS8-219ENST00000469479 SUGP1Q8IWZ8 645 aaKnown RBP5.65□□□□□ -1.5
VPS8-219ENST00000469479 MAGEB6Q8N7X4 407 aa5.65□□□□□ -1.5
VPS8-219ENST00000469479 ANKRD44Q8N8A2 993 aa5.65□□□□□ -1.5
VPS8-219ENST00000469479 COQ10AQ96MF6 247 aa5.65□□□□□ -1.5
VPS8-219ENST00000469479 PDCD2LQ9BRP1 358 aa5.65□□□□□ -1.5
VPS8-219ENST00000469479 TANGO6Q9C0B7 1094 aa5.65□□□□□ -1.5
VPS8-219ENST00000469479 SH2D4AQ9H788 454 aa5.65□□□□□ -1.5
VPS8-219ENST00000469479 CTNNA3Q9UI47 895 aa5.65□□□□□ -1.5
VPS8-219ENST00000469479 CHD8Q9HCK8 2581 aa5.65□□□□□ -1.51
VPS8-219ENST00000469479 TNKSO95271 1327 aa5.65□□□□□ -1.51
VPS8-219ENST00000469479 ATAD5Q96QE3 1844 aa5.64□□□□□ -1.51
VPS8-219ENST00000469479 PLXNA1Q9UIW2 1896 aa5.64□□□□□ -1.51
VPS8-219ENST00000469479 TCF20Q9UGU0 1960 aaKnown RBP5.64□□□□□ -1.51
VPS8-219ENST00000469479 NCK2O43639 380 aa5.64□□□□□ -1.51
VPS8-219ENST00000469479 ZEB2O60315 1214 aa5.64□□□□□ -1.51
VPS8-219ENST00000469479 EFCAB14O75071 495 aa5.64□□□□□ -1.51
VPS8-219ENST00000469479 BAIAP3O94812 1187 aa5.64□□□□□ -1.51
VPS8-219ENST00000469479 NPTXRO95502 500 aa5.64□□□□□ -1.51
VPS8-219ENST00000469479 ASGR1P07306 291 aa5.64□□□□□ -1.51
VPS8-219ENST00000469479 CYP2C18P33260 490 aa5.64□□□□□ -1.51
VPS8-219ENST00000469479 IRF9Q00978 393 aa5.64□□□□□ -1.51
VPS8-219ENST00000469479 ABCB5Q2M3G0 1257 aa5.64□□□□□ -1.51
VPS8-219ENST00000469479 PRR16Q569H4 304 aa5.64□□□□□ -1.51
VPS8-219ENST00000469479 HERC4Q5GLZ8 1057 aaPredicted RBP5.64□□□□□ -1.51
VPS8-219ENST00000469479 PRAMEF19Q5SWL8 479 aa5.64□□□□□ -1.51
VPS8-219ENST00000469479 TATDN1Q6P1N9 297 aa5.64□□□□□ -1.51
VPS8-219ENST00000469479 OVCH1Q7RTY7 1134 aa5.64□□□□□ -1.51
VPS8-219ENST00000469479 ARHGEF19Q8IW93 802 aa5.64□□□□□ -1.51
VPS8-219ENST00000469479 ADHFE1Q8IWW8 467 aa5.64□□□□□ -1.51
VPS8-219ENST00000469479 SLC43A3Q8NBI5 491 aa5.64□□□□□ -1.51
VPS8-219ENST00000469479 ARNTL2Q8WYA1 636 aa5.64□□□□□ -1.51
VPS8-219ENST00000469479 NSUN4Q96CB9 384 aaKnown RBP5.64□□□□□ -1.51
VPS8-219ENST00000469479 WDR11Q9BZH6 1224 aa5.64□□□□□ -1.51
VPS8-219ENST00000469479 UPF3AQ9H1J1 476 aaKnown RBP5.64□□□□□ -1.51
VPS8-219ENST00000469479 PRDM13Q9H4Q3 707 aa5.64□□□□□ -1.51
VPS8-219ENST00000469479 RSAD1Q9HA92 442 aa5.64□□□□□ -1.51
VPS8-219ENST00000469479 SYBUQ9NX95 663 aa5.64□□□□□ -1.51
VPS8-219ENST00000469479 RAI14Q9P0K7 980 aa5.64□□□□□ -1.51
VPS8-219ENST00000469479 SERPINB13Q9UIV8 391 aa5.64□□□□□ -1.51
VPS8-219ENST00000469479 SYNPO2Q9UMS6 1093 aa5.64□□□□□ -1.51
VPS8-219ENST00000469479 COQ6Q9Y2Z9 468 aa5.64□□□□□ -1.51
VPS8-219ENST00000469479 FLT1P17948 1338 aa5.64□□□□□ -1.51
VPS8-219ENST00000469479 PRRC2BQ5JSZ5 2229 aaKnown RBP5.64□□□□□ -1.51
VPS8-219ENST00000469479 CACNA1HO95180 2353 aa5.64□□□□□ -1.51
VPS8-219ENST00000469479 MYH2Q9UKX2 1941 aa5.64□□□□□ -1.51
VPS8-219ENST00000469479 ARHGEF17Q96PE2 2063 aaPredicted RBP5.63□□□□□ -1.51
VPS8-219ENST00000469479 ZNF318Q5VUA4 2279 aa5.63□□□□□ -1.51
VPS8-219ENST00000469479 A0A1B0GUL7 405 aa5.63□□□□□ -1.51
VPS8-219ENST00000469479 AHRRA9YTQ3 701 aa5.63□□□□□ -1.51
VPS8-219ENST00000469479 KCNA5P22460 613 aa5.63□□□□□ -1.51
VPS8-219ENST00000469479 PLS1Q14651 629 aa5.63□□□□□ -1.51
VPS8-219ENST00000469479 PTPROQ16827 1216 aa5.63□□□□□ -1.51
VPS8-219ENST00000469479 CERKLQ49MI3 558 aaPredicted RBP5.63□□□□□ -1.51
VPS8-219ENST00000469479 FOXB2Q5VYV0 432 aa5.63□□□□□ -1.51
VPS8-219ENST00000469479 SLFN12LQ6IEE8 588 aa5.63□□□□□ -1.51
VPS8-219ENST00000469479 CCDC62Q6P9F0 684 aa5.63□□□□□ -1.51
VPS8-219ENST00000469479 SPATC1Q76KD6 591 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms