RNA–Protein interactions for RNA: ENST00000468963.1

SDCCAG3-209, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-209ENST00000468963 PKP1Q13835 747 aa15.83■□□□□ 0.12
SDCCAG3-209ENST00000468963 PUM1Q14671 1186 aaKnown RBP eCLIP15.83■□□□□ 0.12
SDCCAG3-209ENST00000468963 TMEM196Q5HYL7 178 aa15.83■□□□□ 0.12
SDCCAG3-209ENST00000468963 VSTM1Q6UX27 236 aa15.83■□□□□ 0.12
SDCCAG3-209ENST00000468963 C4orf50Q6ZRC1 276 aa15.83■□□□□ 0.12
SDCCAG3-209ENST00000468963 SCN4BQ8IWT1 228 aa15.83■□□□□ 0.12
SDCCAG3-209ENST00000468963 MYLPFQ96A32 169 aa15.83■□□□□ 0.12
SDCCAG3-209ENST00000468963 CCDC127Q96BQ5 260 aa15.83■□□□□ 0.12
SDCCAG3-209ENST00000468963 SPATA17Q96L03 361 aa15.83■□□□□ 0.12
SDCCAG3-209ENST00000468963 CEP295NLQ96MC4 621 aa15.83■□□□□ 0.12
SDCCAG3-209ENST00000468963 CGRRF1Q99675 332 aa15.83■□□□□ 0.12
SDCCAG3-209ENST00000468963 MRPL45Q9BRJ2 306 aaKnown RBP15.83■□□□□ 0.12
SDCCAG3-209ENST00000468963 FBRSL1Q9HCM7 1045 aaKnown RBP15.83■□□□□ 0.12
SDCCAG3-209ENST00000468963 SLC39A2Q9NP94 309 aa15.83■□□□□ 0.12
SDCCAG3-209ENST00000468963 FAM13BQ9NYF5 915 aa15.83■□□□□ 0.12
SDCCAG3-209ENST00000468963 GCNT4Q9P109 453 aa15.83■□□□□ 0.12
SDCCAG3-209ENST00000468963 CGNQ9P2M7 1197 aaKnown RBP15.83■□□□□ 0.12
SDCCAG3-209ENST00000468963 UBE4BO95155 1302 aa15.83■□□□□ 0.12
SDCCAG3-209ENST00000468963 NCOR2Q9Y618 2525 aa15.83■□□□□ 0.12
SDCCAG3-209ENST00000468963 OBSL1O75147 1896 aa15.82■□□□□ 0.12
SDCCAG3-209ENST00000468963 KLRC4O43908 158 aa15.82■□□□□ 0.12
SDCCAG3-209ENST00000468963 TACC1O75410 805 aa15.82■□□□□ 0.12
SDCCAG3-209ENST00000468963 DLATP10515 647 aaKnown RBP15.82■□□□□ 0.12
SDCCAG3-209ENST00000468963 ARSAP15289 507 aa15.82■□□□□ 0.12
SDCCAG3-209ENST00000468963 TNNI1P19237 187 aa15.82■□□□□ 0.12
SDCCAG3-209ENST00000468963 BDNFP23560 247 aa15.82■□□□□ 0.12
SDCCAG3-209ENST00000468963 AFMP43652 599 aa15.82■□□□□ 0.12
SDCCAG3-209ENST00000468963 ME1P48163 572 aa15.82■□□□□ 0.12
SDCCAG3-209ENST00000468963 CYP2J2P51589 502 aa15.82■□□□□ 0.12
SDCCAG3-209ENST00000468963 PSMC1P62191 440 aaKnown RBP15.82■□□□□ 0.12
SDCCAG3-209ENST00000468963 FAM160A1Q05DH4 1040 aa15.82■□□□□ 0.12
SDCCAG3-209ENST00000468963 MAPRE1Q15691 268 aaKnown RBP15.82■□□□□ 0.12
SDCCAG3-209ENST00000468963 FSTL4Q6MZW2 842 aa15.82■□□□□ 0.12
SDCCAG3-209ENST00000468963 HS2ST1Q7LGA3 356 aa15.82■□□□□ 0.12
SDCCAG3-209ENST00000468963 HSCBQ8IWL3 235 aa15.82■□□□□ 0.12
SDCCAG3-209ENST00000468963 MYCBPAPQ8TBZ2 947 aa15.82■□□□□ 0.12
SDCCAG3-209ENST00000468963 FNBP1Q96RU3 617 aa15.82■□□□□ 0.12
SDCCAG3-209ENST00000468963 MMS19Q96T76 1030 aa15.82■□□□□ 0.12
SDCCAG3-209ENST00000468963 CFAP45Q9UL16 551 aa15.82■□□□□ 0.12
SDCCAG3-209ENST00000468963 GREB1Q4ZG55 1949 aa15.82■□□□□ 0.12
SDCCAG3-209ENST00000468963 STAU1O95793 577 aaKnown RBP15.81■□□□□ 0.12
SDCCAG3-209ENST00000468963 USP17L7P0C7H9 530 aa15.81■□□□□ 0.12
SDCCAG3-209ENST00000468963 SLFN14P0C7P3 912 aa15.81■□□□□ 0.12
SDCCAG3-209ENST00000468963 CNR2P34972 360 aa15.81■□□□□ 0.12
SDCCAG3-209ENST00000468963 GALK1P51570 392 aa15.81■□□□□ 0.12
SDCCAG3-209ENST00000468963 DNM1Q05193 864 aaKnown RBP15.81■□□□□ 0.12
SDCCAG3-209ENST00000468963 PDGFRLQ15198 375 aa15.81■□□□□ 0.12
SDCCAG3-209ENST00000468963 ZNF77Q15935 545 aa15.81■□□□□ 0.12
SDCCAG3-209ENST00000468963 KNOP1Q1ED39 458 aaKnown RBP15.81■□□□□ 0.12
SDCCAG3-209ENST00000468963 RSPO4Q2I0M5 234 aaPredicted RBP15.81■□□□□ 0.12
SDCCAG3-209ENST00000468963 CC2D1AQ6P1N0 951 aaPredicted RBP15.81■□□□□ 0.12
SDCCAG3-209ENST00000468963 PKN3Q6P5Z2 889 aa15.81■□□□□ 0.12
SDCCAG3-209ENST00000468963 LONP2Q86WA8 852 aa15.81■□□□□ 0.12
SDCCAG3-209ENST00000468963 GRAMD1CQ8IYS0 662 aa15.81■□□□□ 0.12
SDCCAG3-209ENST00000468963 PLEKHO2Q8TD55 490 aa15.81■□□□□ 0.12
SDCCAG3-209ENST00000468963 SECISBP2LQ93073 1101 aaKnown RBP15.81■□□□□ 0.12
SDCCAG3-209ENST00000468963 PCED1BQ96HM7 432 aa15.81■□□□□ 0.12
SDCCAG3-209ENST00000468963 ANAPC1Q9H1A4 1944 aa15.81■□□□□ 0.12
SDCCAG3-209ENST00000468963 XYLT2Q9H1B5 865 aa15.81■□□□□ 0.12
SDCCAG3-209ENST00000468963 PARD6AQ9NPB6 346 aa15.81■□□□□ 0.12
SDCCAG3-209ENST00000468963 DMAC2Q9NW81 257 aa15.81■□□□□ 0.12
SDCCAG3-209ENST00000468963 SERTAD1Q9UHV2 236 aa15.81■□□□□ 0.12
SDCCAG3-209ENST00000468963 TRAV19A0A0A6YYK7 116 aa15.8■□□□□ 0.12
SDCCAG3-209ENST00000468963 C2orf78A6NCI8 922 aa15.8■□□□□ 0.12
SDCCAG3-209ENST00000468963 TCF3P15923 654 aa15.8■□□□□ 0.12
SDCCAG3-209ENST00000468963 PTPN1P18031 435 aaKnown RBP15.8■□□□□ 0.12
SDCCAG3-209ENST00000468963 HDCP19113 662 aa15.8■□□□□ 0.12
SDCCAG3-209ENST00000468963 GJA4P35212 333 aa15.8■□□□□ 0.12
SDCCAG3-209ENST00000468963 GRIK1P39086 918 aa15.8■□□□□ 0.12
SDCCAG3-209ENST00000468963 MYL6P60660 151 aa15.8■□□□□ 0.12
SDCCAG3-209ENST00000468963 USP46P62068 366 aa15.8■□□□□ 0.12
SDCCAG3-209ENST00000468963 AMPD2Q01433 879 aa15.8■□□□□ 0.12
SDCCAG3-209ENST00000468963 GRSF1Q12849 480 aaKnown RBP eCLIP15.8■□□□□ 0.12
SDCCAG3-209ENST00000468963 STK4Q13043 487 aa15.8■□□□□ 0.12
SDCCAG3-209ENST00000468963 SRSF5Q13243 272 aaKnown RBP15.8■□□□□ 0.12
SDCCAG3-209ENST00000468963 SIM2Q14190 667 aaPredicted RBP15.8■□□□□ 0.12
SDCCAG3-209ENST00000468963 MTF1Q14872 753 aa15.8■□□□□ 0.12
SDCCAG3-209ENST00000468963 LPAL2Q16609 132 aa15.8■□□□□ 0.12
SDCCAG3-209ENST00000468963 WDR72Q3MJ13 1102 aa15.8■□□□□ 0.12
SDCCAG3-209ENST00000468963 LAIR1Q6GTX8 287 aa15.8■□□□□ 0.12
SDCCAG3-209ENST00000468963 DENND5BQ6ZUT9 1274 aa15.8■□□□□ 0.12
SDCCAG3-209ENST00000468963 DGLUCYQ7Z3D6 616 aa15.8■□□□□ 0.12
SDCCAG3-209ENST00000468963 WDR5BQ86VZ2 330 aa15.8■□□□□ 0.12
SDCCAG3-209ENST00000468963 ARL14EPQ8N8R7 260 aaPredicted RBP15.8■□□□□ 0.12
SDCCAG3-209ENST00000468963 TMEM174Q8WUU8 243 aa15.8■□□□□ 0.12
SDCCAG3-209ENST00000468963 OSCP1Q8WVF1 389 aa15.8■□□□□ 0.12
SDCCAG3-209ENST00000468963 PAGE5Q96GU1 130 aa15.8■□□□□ 0.12
SDCCAG3-209ENST00000468963 TTLL2Q9BWV7 592 aa15.8■□□□□ 0.12
SDCCAG3-209ENST00000468963 SNX25Q9H3E2 840 aa15.8■□□□□ 0.12
SDCCAG3-209ENST00000468963 ECT2Q9H8V3 914 aa15.8■□□□□ 0.12
SDCCAG3-209ENST00000468963 TRPC7Q9HCX4 862 aa15.8■□□□□ 0.12
SDCCAG3-209ENST00000468963 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.79■□□□□ 0.12
SDCCAG3-209ENST00000468963 ACTN4O43707 911 aaKnown RBP15.79■□□□□ 0.12
SDCCAG3-209ENST00000468963 EGFP01133 1207 aa15.79■□□□□ 0.12
SDCCAG3-209ENST00000468963 RETP07949 1114 aa15.79■□□□□ 0.12
SDCCAG3-209ENST00000468963 ATICP31939 592 aa15.79■□□□□ 0.12
SDCCAG3-209ENST00000468963 CLDN10P78369 228 aa15.79■□□□□ 0.12
SDCCAG3-209ENST00000468963 ZXDBP98169 803 aa15.79■□□□□ 0.12
SDCCAG3-209ENST00000468963 CYP27A1Q02318 531 aa15.79■□□□□ 0.12
SDCCAG3-209ENST00000468963 USP4Q13107 963 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms