RNA–Protein interactions for RNA: ENST00000468777.5

PCCB-208, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene PCCB, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-208ENST00000468777 PPP1R26Q5T8A7 1209 aaPredicted RBP20.24■□□□□ 0.83
PCCB-208ENST00000468777 SDHAF4Q5VUM1 108 aa20.24■□□□□ 0.83
PCCB-208ENST00000468777 C4orf50Q6ZRC1 276 aa20.24■□□□□ 0.83
PCCB-208ENST00000468777 CCDC149Q6ZUS6 474 aa20.24■□□□□ 0.83
PCCB-208ENST00000468777 PAQR9Q6ZVX9 377 aa20.24■□□□□ 0.83
PCCB-208ENST00000468777 GPR152Q8TDT2 470 aa20.24■□□□□ 0.83
PCCB-208ENST00000468777 C2orf15Q8WU43 125 aaKnown RBP20.24■□□□□ 0.83
PCCB-208ENST00000468777 MSLNLQ96KJ4 702 aa20.24■□□□□ 0.83
PCCB-208ENST00000468777 MED10Q9BTT4 135 aa20.24■□□□□ 0.83
PCCB-208ENST00000468777 SFXN1Q9H9B4 322 aa20.24■□□□□ 0.83
PCCB-208ENST00000468777 TMEM30AQ9NV96 361 aa20.24■□□□□ 0.83
PCCB-208ENST00000468777 DZANK1Q9NVP4 752 aa20.24■□□□□ 0.83
PCCB-208ENST00000468777 DPP7Q9UHL4 492 aa20.24■□□□□ 0.83
PCCB-208ENST00000468777 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.24■□□□□ 0.83
PCCB-208ENST00000468777 GYPCP04921 128 aa20.24■□□□□ 0.83
PCCB-208ENST00000468777 ZNF132P52740 706 aa20.24■□□□□ 0.83
PCCB-208ENST00000468777 TFF2Q03403 129 aa20.24■□□□□ 0.83
PCCB-208ENST00000468777 CPLX3Q8WVH0 158 aa20.24■□□□□ 0.83
PCCB-208ENST00000468777 JAKMIP2Q96AA8 810 aa20.24■□□□□ 0.83
PCCB-208ENST00000468777 CYFIP2Q96F07 1278 aa20.24■□□□□ 0.83
PCCB-208ENST00000468777 FAM81BQ96LP2 452 aa20.24■□□□□ 0.83
PCCB-208ENST00000468777 HAPLN1P10915 354 aaPredicted RBP20.23■□□□□ 0.83
PCCB-208ENST00000468777 ATF6P18850 670 aa20.23■□□□□ 0.83
PCCB-208ENST00000468777 CASP14P31944 242 aa20.23■□□□□ 0.83
PCCB-208ENST00000468777 DDR2Q16832 855 aa20.23■□□□□ 0.83
PCCB-208ENST00000468777 FAM35AQ86V20 835 aa20.23■□□□□ 0.83
PCCB-208ENST00000468777 CNGA4Q8IV77 575 aa20.23■□□□□ 0.83
PCCB-208ENST00000468777 SCN4BQ8IWT1 228 aa20.23■□□□□ 0.83
PCCB-208ENST00000468777 HDAC7Q8WUI4 952 aa20.23■□□□□ 0.83
PCCB-208ENST00000468777 FUBP3Q96I24 572 aaKnown RBP eCLIP20.23■□□□□ 0.83
PCCB-208ENST00000468777 CNTN6Q9UQ52 1028 aa20.23■□□□□ 0.83
PCCB-208ENST00000468777 CYP26A1O43174 497 aa20.22■□□□□ 0.83
PCCB-208ENST00000468777 LRG1P02750 347 aa20.22■□□□□ 0.83
PCCB-208ENST00000468777 TRIM21P19474 475 aaKnown RBP20.22■□□□□ 0.83
PCCB-208ENST00000468777 RFX1P22670 979 aa20.22■□□□□ 0.83
PCCB-208ENST00000468777 SSTR3P32745 418 aaPredicted RBP20.22■□□□□ 0.83
PCCB-208ENST00000468777 ELMSAN1Q6PJG2 1045 aa20.22■□□□□ 0.83
PCCB-208ENST00000468777 TFAP2BQ92481 460 aa20.22■□□□□ 0.83
PCCB-208ENST00000468777 ZNF707Q96C28 371 aaPredicted RBP20.22■□□□□ 0.83
PCCB-208ENST00000468777 ZSWIM1Q9BR11 485 aa20.22■□□□□ 0.83
PCCB-208ENST00000468777 ABCB6Q9NP58 842 aa20.22■□□□□ 0.83
PCCB-208ENST00000468777 KRT82Q9NSB4 513 aa20.22■□□□□ 0.83
PCCB-208ENST00000468777 SPTLC3Q9NUV7 552 aa20.22■□□□□ 0.83
PCCB-208ENST00000468777 F8VZ95 297 aa20.22■□□□□ 0.83
PCCB-208ENST00000468777 MFAP3LO75121 409 aa20.22■□□□□ 0.83
PCCB-208ENST00000468777 BRD2P25440 801 aaKnown RBP20.22■□□□□ 0.83
PCCB-208ENST00000468777 GIPC2Q8TF65 315 aa20.22■□□□□ 0.83
PCCB-208ENST00000468777 PANX2Q96RD6 677 aa20.22■□□□□ 0.83
PCCB-208ENST00000468777 KCNK16Q96T55 309 aa20.22■□□□□ 0.83
PCCB-208ENST00000468777 BAG1Q99933 345 aaPredicted RBP20.22■□□□□ 0.83
PCCB-208ENST00000468777 STK33Q9BYT3 514 aa20.22■□□□□ 0.83
PCCB-208ENST00000468777 ZDHHC7Q9NXF8 308 aa20.22■□□□□ 0.83
PCCB-208ENST00000468777 MAFFQ9ULX9 164 aa20.22■□□□□ 0.83
PCCB-208ENST00000468777 F8VP50 259 aa20.21■□□□□ 0.83
PCCB-208ENST00000468777 BEST1O76090 585 aa20.21■□□□□ 0.83
PCCB-208ENST00000468777 PAEPP09466 180 aa20.21■□□□□ 0.83
PCCB-208ENST00000468777 HOXB8P17481 243 aaPredicted RBP20.21■□□□□ 0.83
PCCB-208ENST00000468777 GRIK1P39086 918 aa20.21■□□□□ 0.83
PCCB-208ENST00000468777 ALDH1A3P47895 512 aa20.21■□□□□ 0.83
PCCB-208ENST00000468777 TUFMP49411 452 aaKnown RBP20.21■□□□□ 0.83
PCCB-208ENST00000468777 SGO2Q562F6 1265 aa20.21■□□□□ 0.83
PCCB-208ENST00000468777 SMRP1Q8NCR6 262 aa20.21■□□□□ 0.83
PCCB-208ENST00000468777 SPAG5Q96R06 1193 aa20.21■□□□□ 0.83
PCCB-208ENST00000468777 PRKD2Q9BZL6 878 aa20.21■□□□□ 0.83
PCCB-208ENST00000468777 S1PR5Q9H228 398 aa20.21■□□□□ 0.83
PCCB-208ENST00000468777 HCFC1R1Q9NWW0 138 aa20.21■□□□□ 0.83
PCCB-208ENST00000468777 CEP72Q9P209 647 aa20.21■□□□□ 0.83
PCCB-208ENST00000468777 CD207Q9UJ71 328 aa20.21■□□□□ 0.83
PCCB-208ENST00000468777 AP1G2O75843 785 aa20.2■□□□□ 0.82
PCCB-208ENST00000468777 JAM2P57087 298 aa20.2■□□□□ 0.82
PCCB-208ENST00000468777 FAM71AQ8IYT1 594 aa20.2■□□□□ 0.82
PCCB-208ENST00000468777 SMG7Q92540 1137 aaKnown RBP20.2■□□□□ 0.82
PCCB-208ENST00000468777 SMARCD1Q96GM5 515 aa20.2■□□□□ 0.82
PCCB-208ENST00000468777 HNRNPABQ99729 332 aaKnown RBP20.2■□□□□ 0.82
PCCB-208ENST00000468777 NUP58Q9BVL2 599 aa20.2■□□□□ 0.82
PCCB-208ENST00000468777 DNAI2Q9GZS0 605 aa20.2■□□□□ 0.82
PCCB-208ENST00000468777 HSFX1Q9UBD0 423 aa20.2■□□□□ 0.82
PCCB-208ENST00000468777 TSPAN16Q9UKR8 245 aa20.2■□□□□ 0.82
PCCB-208ENST00000468777 VDRP11473 427 aa20.2■□□□□ 0.82
PCCB-208ENST00000468777 GNA15P30679 374 aa20.2■□□□□ 0.82
PCCB-208ENST00000468777 CACNA2D4Q7Z3S7 1137 aa20.2■□□□□ 0.82
PCCB-208ENST00000468777 SLC47A2Q86VL8 602 aa20.2■□□□□ 0.82
PCCB-208ENST00000468777 TMEM139Q8IV31 216 aa20.2■□□□□ 0.82
PCCB-208ENST00000468777 ADAM7Q9H2U9 754 aa20.2■□□□□ 0.82
PCCB-208ENST00000468777 COG5Q9UP83 839 aa20.2■□□□□ 0.82
PCCB-208ENST00000468777 O00370 1275 aa20.19■□□□□ 0.82
PCCB-208ENST00000468777 GFPT2O94808 682 aa20.19■□□□□ 0.82
PCCB-208ENST00000468777 HNRNPA1P09651 372 aaKnown RBP eCLIP20.19■□□□□ 0.82
PCCB-208ENST00000468777 HOXA9P31269 272 aa20.19■□□□□ 0.82
PCCB-208ENST00000468777 MAGEA11P43364 429 aa20.19■□□□□ 0.82
PCCB-208ENST00000468777 MAP3K7CLP57077 242 aa20.19■□□□□ 0.82
PCCB-208ENST00000468777 NTHL1P78549 312 aa20.19■□□□□ 0.82
PCCB-208ENST00000468777 MTMR3Q13615 1198 aa20.19■□□□□ 0.82
PCCB-208ENST00000468777 GOLGA7BQ2TAP0 167 aa20.19■□□□□ 0.82
PCCB-208ENST00000468777 VSTM1Q6UX27 236 aa20.19■□□□□ 0.82
PCCB-208ENST00000468777 SMOQ99835 787 aa20.19■□□□□ 0.82
PCCB-208ENST00000468777 TTYH3Q9C0H2 523 aa20.19■□□□□ 0.82
PCCB-208ENST00000468777 PIDD1Q9HB75 910 aa20.19■□□□□ 0.82
PCCB-208ENST00000468777 ARHGAP6O43182 974 aa20.18■□□□□ 0.82
PCCB-208ENST00000468777 FAM200BP0CF97 657 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms