RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 ZNF396Q96N95 335 aaPredicted RBP22.55■■□□□ 1.2
COL9A3-207ENST00000467819 CUEDC2Q9H467 287 aa22.55■■□□□ 1.2
COL9A3-207ENST00000467819 MAGEC2Q9UBF1 373 aaPredicted RBP22.55■■□□□ 1.2
COL9A3-207ENST00000467819 CDH9Q9ULB4 789 aa22.55■■□□□ 1.2
COL9A3-207ENST00000467819 DCDC2BA2VCK2 349 aa22.54■■□□□ 1.2
COL9A3-207ENST00000467819 EIF3DO15371 548 aaKnown RBP eCLIP22.54■■□□□ 1.2
COL9A3-207ENST00000467819 LRP3O75074 770 aa22.54■■□□□ 1.2
COL9A3-207ENST00000467819 RNF40O75150 1001 aa22.54■■□□□ 1.2
COL9A3-207ENST00000467819 PDGFRBP09619 1106 aa22.54■■□□□ 1.2
COL9A3-207ENST00000467819 HOXA6P31267 233 aa22.54■■□□□ 1.2
COL9A3-207ENST00000467819 MAGEA11P43364 429 aa22.54■■□□□ 1.2
COL9A3-207ENST00000467819 AMPD3Q01432 767 aa22.54■■□□□ 1.2
COL9A3-207ENST00000467819 AMPD2Q01433 879 aa22.54■■□□□ 1.2
COL9A3-207ENST00000467819 ZNF77Q15935 545 aa22.54■■□□□ 1.2
COL9A3-207ENST00000467819 FAM26FQ5R3K3 315 aa22.54■■□□□ 1.2
COL9A3-207ENST00000467819 WDR49Q8IV35 697 aa22.54■■□□□ 1.2
COL9A3-207ENST00000467819 CPA6Q8N4T0 437 aa22.54■■□□□ 1.2
COL9A3-207ENST00000467819 FAM160A2Q8N612 972 aaPredicted RBP22.54■■□□□ 1.2
COL9A3-207ENST00000467819 ARL14EPQ8N8R7 260 aaPredicted RBP22.54■■□□□ 1.2
COL9A3-207ENST00000467819 MMS19Q96T76 1030 aa22.54■■□□□ 1.2
COL9A3-207ENST00000467819 RTKNQ9BST9 563 aa22.54■■□□□ 1.2
COL9A3-207ENST00000467819 KIAA1586Q9HCI6 787 aa22.54■■□□□ 1.2
COL9A3-207ENST00000467819 FBRSL1Q9HCM7 1045 aaKnown RBP22.54■■□□□ 1.2
COL9A3-207ENST00000467819 CRTAC1Q9NQ79 661 aa22.54■■□□□ 1.2
COL9A3-207ENST00000467819 SEMA4GQ9NTN9 838 aa22.54■■□□□ 1.2
COL9A3-207ENST00000467819 DUS2Q9NX74 493 aaKnown RBP22.54■■□□□ 1.2
COL9A3-207ENST00000467819 WNT6Q9Y6F9 365 aa22.54■■□□□ 1.2
COL9A3-207ENST00000467819 C2orf78A6NCI8 922 aa22.53■■□□□ 1.2
COL9A3-207ENST00000467819 DLATP10515 647 aaKnown RBP22.53■■□□□ 1.2
COL9A3-207ENST00000467819 BDNFP23560 247 aa22.53■■□□□ 1.2
COL9A3-207ENST00000467819 GJA4P35212 333 aa22.53■■□□□ 1.2
COL9A3-207ENST00000467819 IFNAR2P48551 515 aa22.53■■□□□ 1.2
COL9A3-207ENST00000467819 CYP2J2P51589 502 aa22.53■■□□□ 1.2
COL9A3-207ENST00000467819 CYP27A1Q02318 531 aa22.53■■□□□ 1.2
COL9A3-207ENST00000467819 USP4Q13107 963 aa22.53■■□□□ 1.2
COL9A3-207ENST00000467819 SHC4Q6S5L8 630 aa22.53■■□□□ 1.2
COL9A3-207ENST00000467819 EPM2AIP1Q7L775 607 aaPredicted RBP22.53■■□□□ 1.2
COL9A3-207ENST00000467819 TRAPPC11Q7Z392 1133 aa22.53■■□□□ 1.2
COL9A3-207ENST00000467819 LIMS2Q7Z4I7 341 aa22.53■■□□□ 1.2
COL9A3-207ENST00000467819 NELFCDQ8IXH7 590 aa22.53■■□□□ 1.2
COL9A3-207ENST00000467819 FSIP1Q8NA03 581 aa22.53■■□□□ 1.2
COL9A3-207ENST00000467819 ZNF507Q8TCN5 953 aa22.53■■□□□ 1.2
COL9A3-207ENST00000467819 BACH2Q9BYV9 841 aa22.53■■□□□ 1.2
COL9A3-207ENST00000467819 ECT2Q9H8V3 914 aa22.53■■□□□ 1.2
COL9A3-207ENST00000467819 AGPAT3Q9NRZ7 376 aa22.53■■□□□ 1.2
COL9A3-207ENST00000467819 POLR3BQ9NW08 1133 aaPredicted RBP22.53■■□□□ 1.2
COL9A3-207ENST00000467819 SLC8A2Q9UPR5 921 aa22.53■■□□□ 1.2
COL9A3-207ENST00000467819 CLIC2O15247 247 aa22.52■■□□□ 1.2
COL9A3-207ENST00000467819 TGFB1I1O43294 461 aa22.52■■□□□ 1.2
COL9A3-207ENST00000467819 CUTAO60888 179 aa22.52■■□□□ 1.2
COL9A3-207ENST00000467819 ATG13O75143 517 aa22.52■■□□□ 1.2
COL9A3-207ENST00000467819 YEATS4O95619 227 aa22.52■■□□□ 1.2
COL9A3-207ENST00000467819 TNNI1P19237 187 aa22.52■■□□□ 1.2
COL9A3-207ENST00000467819 WARSP23381 471 aaKnown RBP22.52■■□□□ 1.2
COL9A3-207ENST00000467819 GRIK1P39086 918 aa22.52■■□□□ 1.2
COL9A3-207ENST00000467819 GALK1P51570 392 aa22.52■■□□□ 1.2
COL9A3-207ENST00000467819 KCNB1Q14721 858 aa22.52■■□□□ 1.2
COL9A3-207ENST00000467819 SNRNP35Q16560 246 aaKnown RBP22.52■■□□□ 1.2
COL9A3-207ENST00000467819 FOXD4L6Q3SYB3 417 aaPredicted RBP22.52■■□□□ 1.2
COL9A3-207ENST00000467819 FOXD4L3Q6VB84 417 aaPredicted RBP22.52■■□□□ 1.2
COL9A3-207ENST00000467819 PRR23CQ6ZRP0 262 aa22.52■■□□□ 1.2
COL9A3-207ENST00000467819 IQUBQ8NA54 791 aa22.52■■□□□ 1.2
COL9A3-207ENST00000467819 OSCP1Q8WVF1 389 aa22.52■■□□□ 1.2
COL9A3-207ENST00000467819 P2RY13Q9BPV8 354 aa22.52■■□□□ 1.2
COL9A3-207ENST00000467819 GCNT4Q9P109 453 aa22.52■■□□□ 1.2
COL9A3-207ENST00000467819 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.51■■□□□ 1.19
COL9A3-207ENST00000467819 DRD1P21728 446 aa22.51■■□□□ 1.19
COL9A3-207ENST00000467819 CASP1P29466 404 aa22.51■■□□□ 1.19
COL9A3-207ENST00000467819 MAPRE1Q15691 268 aaKnown RBP22.51■■□□□ 1.19
COL9A3-207ENST00000467819 CSRP2Q16527 193 aa22.51■■□□□ 1.19
COL9A3-207ENST00000467819 VSTM1Q6UX27 236 aa22.51■■□□□ 1.19
COL9A3-207ENST00000467819 SH3RF2Q8TEC5 729 aa22.51■■□□□ 1.19
COL9A3-207ENST00000467819 ATP2A3Q93084 1043 aa22.51■■□□□ 1.19
COL9A3-207ENST00000467819 CCDC127Q96BQ5 260 aa22.51■■□□□ 1.19
COL9A3-207ENST00000467819 FNBP1Q96RU3 617 aa22.51■■□□□ 1.19
COL9A3-207ENST00000467819 CGRRF1Q99675 332 aa22.51■■□□□ 1.19
COL9A3-207ENST00000467819 MRPL45Q9BRJ2 306 aaKnown RBP22.51■■□□□ 1.19
COL9A3-207ENST00000467819 TPRP12270 2363 aaKnown RBP22.51■■□□□ 1.19
COL9A3-207ENST00000467819 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.5■■□□□ 1.19
COL9A3-207ENST00000467819 CST3P01034 146 aaPredicted RBP22.5■■□□□ 1.19
COL9A3-207ENST00000467819 CCDC192P0DO97 292 aa22.5■■□□□ 1.19
COL9A3-207ENST00000467819 HDCP19113 662 aa22.5■■□□□ 1.19
COL9A3-207ENST00000467819 ANXA13P27216 316 aa22.5■■□□□ 1.19
COL9A3-207ENST00000467819 USP46P62068 366 aa22.5■■□□□ 1.19
COL9A3-207ENST00000467819 PSMD6Q15008 389 aa22.5■■□□□ 1.19
COL9A3-207ENST00000467819 EML3Q32P44 896 aa22.5■■□□□ 1.19
COL9A3-207ENST00000467819 MDH1BQ5I0G3 518 aa22.5■■□□□ 1.19
COL9A3-207ENST00000467819 CNNM4Q6P4Q7 775 aa22.5■■□□□ 1.19
COL9A3-207ENST00000467819 NETO1Q8TDF5 533 aa22.5■■□□□ 1.19
COL9A3-207ENST00000467819 GAB3Q8WWW8 586 aa22.5■■□□□ 1.19
COL9A3-207ENST00000467819 EXOC4Q96A65 974 aa22.5■■□□□ 1.19
COL9A3-207ENST00000467819 PCED1BQ96HM7 432 aa22.5■■□□□ 1.19
COL9A3-207ENST00000467819 SPATA17Q96L03 361 aa22.5■■□□□ 1.19
COL9A3-207ENST00000467819 HHIPQ96QV1 700 aa22.5■■□□□ 1.19
COL9A3-207ENST00000467819 C7orf25Q9BPX7 421 aa22.5■■□□□ 1.19
COL9A3-207ENST00000467819 BLZF1Q9H2G9 400 aa22.5■■□□□ 1.19
COL9A3-207ENST00000467819 SNX25Q9H3E2 840 aa22.5■■□□□ 1.19
COL9A3-207ENST00000467819 UBE4BO95155 1302 aa22.5■■□□□ 1.19
COL9A3-207ENST00000467819 MYOFQ9NZM1 2061 aa22.5■■□□□ 1.19
COL9A3-207ENST00000467819 MYH10P35580 1976 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms