RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-205ENST00000467663 NOTCH4Q99466 2003 aa12.85□□□□□ -0.35
CTNS-205ENST00000467663 SSU72P8A0A1W2PR75 194 aa12.85□□□□□ -0.35
CTNS-205ENST00000467663 ZNF197O14709 1029 aa12.85□□□□□ -0.35
CTNS-205ENST00000467663 PHACTR2O75167 634 aa12.85□□□□□ -0.35
CTNS-205ENST00000467663 NOL4O94818 638 aa12.85□□□□□ -0.35
CTNS-205ENST00000467663 OR4Q2P0C623 313 aa12.85□□□□□ -0.35
CTNS-205ENST00000467663 AOC1P19801 751 aa12.85□□□□□ -0.35
CTNS-205ENST00000467663 TBXAS1P24557 533 aaPredicted RBP12.85□□□□□ -0.35
CTNS-205ENST00000467663 MSNP26038 577 aaKnown RBP12.85□□□□□ -0.35
CTNS-205ENST00000467663 STAT1P42224 750 aa12.85□□□□□ -0.35
CTNS-205ENST00000467663 TAF6P49848 677 aa12.85□□□□□ -0.35
CTNS-205ENST00000467663 EPHA5P54756 1037 aa12.85□□□□□ -0.35
CTNS-205ENST00000467663 ADKP55263 362 aaKnown RBP12.85□□□□□ -0.35
CTNS-205ENST00000467663 WNT7BP56706 349 aa12.85□□□□□ -0.35
CTNS-205ENST00000467663 POLR2FP61218 127 aaKnown RBP12.85□□□□□ -0.35
CTNS-205ENST00000467663 GCNT1Q02742 428 aa12.85□□□□□ -0.35
CTNS-205ENST00000467663 TWF1Q12792 350 aa12.85□□□□□ -0.35
CTNS-205ENST00000467663 BIRC3Q13489 604 aa12.85□□□□□ -0.35
CTNS-205ENST00000467663 SGSM1Q2NKQ1 1148 aa12.85□□□□□ -0.35
CTNS-205ENST00000467663 SFMBT2Q5VUG0 894 aa12.85□□□□□ -0.35
CTNS-205ENST00000467663 IQCEQ6IPM2 695 aa12.85□□□□□ -0.35
CTNS-205ENST00000467663 DPY19L2P1Q6NXN4 242 aa12.85□□□□□ -0.35
CTNS-205ENST00000467663 CCDC170Q8IYT3 715 aa12.85□□□□□ -0.35
CTNS-205ENST00000467663 PIAS4Q8N2W9 510 aaPredicted RBP12.85□□□□□ -0.35
CTNS-205ENST00000467663 ELMOD1Q8N336 334 aa12.85□□□□□ -0.35
CTNS-205ENST00000467663 LEMD2Q8NC56 503 aa12.85□□□□□ -0.35
CTNS-205ENST00000467663 ING5Q8WYH8 240 aa12.85□□□□□ -0.35
CTNS-205ENST00000467663 BAP1Q92560 729 aa12.85□□□□□ -0.35
CTNS-205ENST00000467663 ZNF512Q96ME7 567 aaPredicted RBP12.85□□□□□ -0.35
CTNS-205ENST00000467663 RTP3Q9BQQ7 232 aa12.85□□□□□ -0.35
CTNS-205ENST00000467663 CORO1BQ9BR76 489 aa12.85□□□□□ -0.35
CTNS-205ENST00000467663 IRF2BPLQ9H1B7 796 aa12.85□□□□□ -0.35
CTNS-205ENST00000467663 SIX2Q9NPC8 291 aa12.85□□□□□ -0.35
CTNS-205ENST00000467663 HSFX1Q9UBD0 423 aa12.85□□□□□ -0.35
CTNS-205ENST00000467663 DSEQ9UL01 958 aa12.85□□□□□ -0.35
CTNS-205ENST00000467663 YIPF1Q9Y548 306 aa12.85□□□□□ -0.35
CTNS-205ENST00000467663 CYB561D2O14569 222 aa12.84□□□□□ -0.35
CTNS-205ENST00000467663 PI15O43692 258 aa12.84□□□□□ -0.35
CTNS-205ENST00000467663 ECI2O75521 394 aa12.84□□□□□ -0.35
CTNS-205ENST00000467663 GFPT2O94808 682 aa12.84□□□□□ -0.35
CTNS-205ENST00000467663 STAU1O95793 577 aaKnown RBP12.84□□□□□ -0.35
CTNS-205ENST00000467663 FERP16591 822 aa12.84□□□□□ -0.35
CTNS-205ENST00000467663 CEBPBP17676 345 aa12.84□□□□□ -0.35
CTNS-205ENST00000467663 PNPLA4P41247 253 aa12.84□□□□□ -0.35
CTNS-205ENST00000467663 CCR2P41597 374 aa12.84□□□□□ -0.35
CTNS-205ENST00000467663 PIK3CAP42336 1068 aa12.84□□□□□ -0.35
CTNS-205ENST00000467663 YWHAEP62258 255 aaKnown RBP12.84□□□□□ -0.35
CTNS-205ENST00000467663 GPC5P78333 572 aa12.84□□□□□ -0.35
CTNS-205ENST00000467663 CCZ1BP86790 482 aa12.84□□□□□ -0.35
CTNS-205ENST00000467663 CCZ1P86791 482 aaPredicted RBP12.84□□□□□ -0.35
CTNS-205ENST00000467663 DUSP4Q13115 394 aa12.84□□□□□ -0.35
CTNS-205ENST00000467663 PLD1Q13393 1074 aa12.84□□□□□ -0.35
CTNS-205ENST00000467663 TRPC3Q13507 836 aa12.84□□□□□ -0.35
CTNS-205ENST00000467663 CYP4A22Q5TCH4 519 aa12.84□□□□□ -0.35
CTNS-205ENST00000467663 PHLDB3Q6NSJ2 640 aa12.84□□□□□ -0.35
CTNS-205ENST00000467663 PDZD4Q76G19 769 aaPredicted RBP12.84□□□□□ -0.35
CTNS-205ENST00000467663 RRAGAQ7L523 313 aa12.84□□□□□ -0.35
CTNS-205ENST00000467663 TRAPPC11Q7Z392 1133 aa12.84□□□□□ -0.35
CTNS-205ENST00000467663 HS6ST3Q8IZP7 471 aa12.84□□□□□ -0.35
CTNS-205ENST00000467663 TXLNBQ8N3L3 684 aa12.84□□□□□ -0.35
CTNS-205ENST00000467663 TTC39CQ8N584 583 aa12.84□□□□□ -0.35
CTNS-205ENST00000467663 OR10T2Q8NGX3 314 aa12.84□□□□□ -0.35
CTNS-205ENST00000467663 CXorf38Q8TB03 319 aa12.84□□□□□ -0.35
CTNS-205ENST00000467663 ZNF516Q92618 1163 aa12.84□□□□□ -0.35
CTNS-205ENST00000467663 TCEAL4Q96EI5 215 aa12.84□□□□□ -0.35
CTNS-205ENST00000467663 MCRS1Q96EZ8 462 aa12.84□□□□□ -0.35
CTNS-205ENST00000467663 PGLYRP2Q96PD5 576 aa12.84□□□□□ -0.35
CTNS-205ENST00000467663 TMEM209Q96SK2 561 aa12.84□□□□□ -0.35
CTNS-205ENST00000467663 CRISPLD1Q9H336 500 aa12.84□□□□□ -0.35
CTNS-205ENST00000467663 VRTNQ9H8Y1 702 aa12.84□□□□□ -0.35
CTNS-205ENST00000467663 KCND1Q9NSA2 647 aa12.84□□□□□ -0.35
CTNS-205ENST00000467663 ITGA11Q9UKX5 1188 aa12.84□□□□□ -0.35
CTNS-205ENST00000467663 CA14Q9ULX7 337 aa12.84□□□□□ -0.35
CTNS-205ENST00000467663 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.84□□□□□ -0.35
CTNS-205ENST00000467663 MTMR11A4FU01 709 aa12.83□□□□□ -0.36
CTNS-205ENST00000467663 KPNA7A9QM74 516 aa12.83□□□□□ -0.36
CTNS-205ENST00000467663 MOSPD3O75425 235 aa12.83□□□□□ -0.36
CTNS-205ENST00000467663 HLA-DRAP01903 254 aa12.83□□□□□ -0.36
CTNS-205ENST00000467663 SERPING1P05155 500 aa12.83□□□□□ -0.36
CTNS-205ENST00000467663 P4HA1P13674 534 aa12.83□□□□□ -0.36
CTNS-205ENST00000467663 CYLC1P35663 651 aaPredicted RBP12.83□□□□□ -0.36
CTNS-205ENST00000467663 PRKCIP41743 596 aa12.83□□□□□ -0.36
CTNS-205ENST00000467663 KLK7P49862 253 aa12.83□□□□□ -0.36
CTNS-205ENST00000467663 JAM2P57087 298 aa12.83□□□□□ -0.36
CTNS-205ENST00000467663 TFAMQ00059 246 aaKnown RBP12.83□□□□□ -0.36
CTNS-205ENST00000467663 NCOA4Q13772 614 aa12.83□□□□□ -0.36
CTNS-205ENST00000467663 SV2CQ496J9 727 aa12.83□□□□□ -0.36
CTNS-205ENST00000467663 TDRD10Q5VZ19 366 aaKnown RBP12.83□□□□□ -0.36
CTNS-205ENST00000467663 ALYREFQ86V81 257 aaKnown RBP12.83□□□□□ -0.36
CTNS-205ENST00000467663 VPS36Q86VN1 386 aa12.83□□□□□ -0.36
CTNS-205ENST00000467663 METTL23Q86XA0 190 aa12.83□□□□□ -0.36
CTNS-205ENST00000467663 C1orf127Q8N9H9 656 aa12.83□□□□□ -0.36
CTNS-205ENST00000467663 TAS1R2Q8TE23 839 aa12.83□□□□□ -0.36
CTNS-205ENST00000467663 ELSPBP1Q96BH3 223 aa12.83□□□□□ -0.36
CTNS-205ENST00000467663 ZNF560Q96MR9 790 aa12.83□□□□□ -0.36
CTNS-205ENST00000467663 KXD1Q9BQD3 176 aa12.83□□□□□ -0.36
CTNS-205ENST00000467663 LRRC3Q9BY71 257 aa12.83□□□□□ -0.36
CTNS-205ENST00000467663 ZCWPW1Q9H0M4 648 aa12.83□□□□□ -0.36
CTNS-205ENST00000467663 ASAH2Q9NR71 780 aa12.83□□□□□ -0.36
CTNS-205ENST00000467663 ARHGEF3Q9NR81 526 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms