RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 PRR16Q569H4 304 aa4.8□□□□□ -1.64
VPS13A-209ENST00000467124 UBXN11Q5T124 520 aa4.8□□□□□ -1.64
VPS13A-209ENST00000467124 FAM102AQ5T9C2 384 aaPredicted RBP4.8□□□□□ -1.64
VPS13A-209ENST00000467124 ARHGAP40Q5TG30 622 aa4.8□□□□□ -1.64
VPS13A-209ENST00000467124 FAXCQ5TGI0 409 aa4.8□□□□□ -1.64
VPS13A-209ENST00000467124 JAKMIP3Q5VZ66 844 aa4.8□□□□□ -1.64
VPS13A-209ENST00000467124 RGS7BPQ6MZT1 257 aaPredicted RBP4.8□□□□□ -1.64
VPS13A-209ENST00000467124 KLHL17Q6TDP4 642 aa4.8□□□□□ -1.64
VPS13A-209ENST00000467124 CYP26C1Q6V0L0 522 aa4.8□□□□□ -1.64
VPS13A-209ENST00000467124 KRT28Q7Z3Y7 464 aa4.8□□□□□ -1.64
VPS13A-209ENST00000467124 GSPT2Q8IYD1 628 aaKnown RBP4.8□□□□□ -1.64
VPS13A-209ENST00000467124 STT3BQ8TCJ2 826 aa4.8□□□□□ -1.64
VPS13A-209ENST00000467124 CSGALNACT1Q8TDX6 532 aa4.8□□□□□ -1.64
VPS13A-209ENST00000467124 TMEM125Q96AQ2 219 aa4.8□□□□□ -1.64
VPS13A-209ENST00000467124 PNKPQ96T60 521 aa4.8□□□□□ -1.64
VPS13A-209ENST00000467124 SLC46A2Q9BY10 475 aa4.8□□□□□ -1.64
VPS13A-209ENST00000467124 GPR87Q9BY21 358 aa4.8□□□□□ -1.64
VPS13A-209ENST00000467124 KRTAP4-9Q9BYQ8 210 aa4.8□□□□□ -1.64
VPS13A-209ENST00000467124 XYLT2Q9H1B5 865 aa4.8□□□□□ -1.64
VPS13A-209ENST00000467124 ZCCHC4Q9H5U6 513 aa4.8□□□□□ -1.64
VPS13A-209ENST00000467124 GBA2Q9HCG7 927 aaPredicted RBP4.8□□□□□ -1.64
VPS13A-209ENST00000467124 PARD6AQ9NPB6 346 aa4.8□□□□□ -1.64
VPS13A-209ENST00000467124 CTTNBP2NLQ9P2B4 639 aa4.8□□□□□ -1.64
VPS13A-209ENST00000467124 DNMT3BQ9UBC3 853 aaKnown RBP4.8□□□□□ -1.64
VPS13A-209ENST00000467124 LPAR3Q9UBY5 353 aa4.8□□□□□ -1.64
VPS13A-209ENST00000467124 EIF2B4Q9UI10 523 aaKnown RBP4.8□□□□□ -1.64
VPS13A-209ENST00000467124 SHOC2Q9UQ13 582 aa4.8□□□□□ -1.64
VPS13A-209ENST00000467124 A0A1B0GTW7 788 aa4.79□□□□□ -1.64
VPS13A-209ENST00000467124 TISP43B9A030 160 aa4.79□□□□□ -1.64
VPS13A-209ENST00000467124 PCDH17O14917 1159 aa4.79□□□□□ -1.64
VPS13A-209ENST00000467124 NCAM2O15394 837 aa4.79□□□□□ -1.64
VPS13A-209ENST00000467124 IRAK2O43187 625 aa4.79□□□□□ -1.64
VPS13A-209ENST00000467124 COQ9O75208 318 aa4.79□□□□□ -1.64
VPS13A-209ENST00000467124 SUN1O94901 812 aa4.79□□□□□ -1.64
VPS13A-209ENST00000467124 ZFPL1O95159 310 aa4.79□□□□□ -1.64
VPS13A-209ENST00000467124 GPANK1O95872 356 aa4.79□□□□□ -1.64
VPS13A-209ENST00000467124 ATXN1LP0C7T5 689 aaKnown RBP4.79□□□□□ -1.64
VPS13A-209ENST00000467124 CKMT1AP12532 417 aa4.79□□□□□ -1.64
VPS13A-209ENST00000467124 EGR1P18146 543 aa4.79□□□□□ -1.64
VPS13A-209ENST00000467124 TNFAIP3P21580 790 aa4.79□□□□□ -1.64
VPS13A-209ENST00000467124 SCNN1GP51170 649 aa4.79□□□□□ -1.64
VPS13A-209ENST00000467124 RABGGTBP53611 331 aa4.79□□□□□ -1.64
VPS13A-209ENST00000467124 PNLIPRP1P54315 467 aa4.79□□□□□ -1.64
VPS13A-209ENST00000467124 WNT3P56703 355 aa4.79□□□□□ -1.64
VPS13A-209ENST00000467124 SP2Q02086 613 aa4.79□□□□□ -1.64
VPS13A-209ENST00000467124 OCA2Q04671 838 aa4.79□□□□□ -1.64
VPS13A-209ENST00000467124 CUL4BQ13620 913 aa4.79□□□□□ -1.64
VPS13A-209ENST00000467124 MAPKAPK3Q16644 382 aa4.79□□□□□ -1.64
VPS13A-209ENST00000467124 BTBD16Q32M84 506 aa4.79□□□□□ -1.64
VPS13A-209ENST00000467124 ZNF750Q32MQ0 723 aa4.79□□□□□ -1.64
VPS13A-209ENST00000467124 HS1BP3Q53T59 392 aa4.79□□□□□ -1.64
VPS13A-209ENST00000467124 VPS53Q5VIR6 699 aa4.79□□□□□ -1.64
VPS13A-209ENST00000467124 MANEALQ5VSG8 457 aa4.79□□□□□ -1.64
VPS13A-209ENST00000467124 WDR78Q5VTH9 848 aa4.79□□□□□ -1.64
VPS13A-209ENST00000467124 AGAP9Q5VTM2 703 aa4.79□□□□□ -1.64
VPS13A-209ENST00000467124 GAS2L3Q86XJ1 694 aa4.79□□□□□ -1.64
VPS13A-209ENST00000467124 GATAD2AQ86YP4 633 aa4.79□□□□□ -1.64
VPS13A-209ENST00000467124 CCDC117Q8IWD4 279 aaPredicted RBP4.79□□□□□ -1.64
VPS13A-209ENST00000467124 TEX19Q8NA77 164 aa4.79□□□□□ -1.64
VPS13A-209ENST00000467124 SCAMP5Q8TAC9 235 aa4.79□□□□□ -1.64
VPS13A-209ENST00000467124 SMCR8Q8TEV9 937 aaPredicted RBP4.79□□□□□ -1.64
VPS13A-209ENST00000467124 AFG1LQ8WV93 481 aa4.79□□□□□ -1.64
VPS13A-209ENST00000467124 RNF31Q96EP0 1072 aa4.79□□□□□ -1.64
VPS13A-209ENST00000467124 MOGAT1Q96PD6 335 aa4.79□□□□□ -1.64
VPS13A-209ENST00000467124 MNTQ99583 582 aa4.79□□□□□ -1.64
VPS13A-209ENST00000467124 KATNAL1Q9BW62 490 aa4.79□□□□□ -1.64
VPS13A-209ENST00000467124 EIF2AQ9BY44 585 aaKnown RBP4.79□□□□□ -1.64
VPS13A-209ENST00000467124 SLC25A32Q9H2D1 315 aa4.79□□□□□ -1.64
VPS13A-209ENST00000467124 NECTIN3Q9NQS3 549 aa4.79□□□□□ -1.64
VPS13A-209ENST00000467124 AURKAIP1Q9NWT8 199 aaPredicted RBP4.79□□□□□ -1.64
VPS13A-209ENST00000467124 TRPM5Q9NZQ8 1165 aa4.79□□□□□ -1.64
VPS13A-209ENST00000467124 DKK4Q9UBT3 224 aa4.79□□□□□ -1.64
VPS13A-209ENST00000467124 SRP68Q9UHB9 627 aaKnown RBP4.79□□□□□ -1.64
VPS13A-209ENST00000467124 SERTAD3Q9UJW9 196 aa4.79□□□□□ -1.64
VPS13A-209ENST00000467124 ANAPC4Q9UJX5 808 aa4.79□□□□□ -1.64
VPS13A-209ENST00000467124 CRYL1Q9Y2S2 319 aa4.79□□□□□ -1.64
VPS13A-209ENST00000467124 NEU2Q9Y3R4 380 aa4.79□□□□□ -1.64
VPS13A-209ENST00000467124 LRRFIP2Q9Y608 721 aaKnown RBP4.79□□□□□ -1.64
VPS13A-209ENST00000467124 F5H697 171 aa4.78□□□□□ -1.64
VPS13A-209ENST00000467124 J3KTA2 159 aa4.78□□□□□ -1.64
VPS13A-209ENST00000467124 AGPSO00116 658 aa4.78□□□□□ -1.64
VPS13A-209ENST00000467124 EYA2O00167 538 aa4.78□□□□□ -1.64
VPS13A-209ENST00000467124 GPR42O15529 346 aa4.78□□□□□ -1.64
VPS13A-209ENST00000467124 RPS6KA4O75676 772 aa4.78□□□□□ -1.64
VPS13A-209ENST00000467124 KRT38O76015 456 aa4.78□□□□□ -1.64
VPS13A-209ENST00000467124 ACTL6BO94805 426 aa4.78□□□□□ -1.64
VPS13A-209ENST00000467124 VNN1O95497 513 aa4.78□□□□□ -1.64
VPS13A-209ENST00000467124 ERBB2P04626 1255 aa4.78□□□□□ -1.64
VPS13A-209ENST00000467124 ELANEP08246 267 aa4.78□□□□□ -1.64
VPS13A-209ENST00000467124 PDHA1P08559 390 aa4.78□□□□□ -1.64
VPS13A-209ENST00000467124 ITGA5P08648 1049 aa4.78□□□□□ -1.64
VPS13A-209ENST00000467124 ARP10275 920 aa4.78□□□□□ -1.64
VPS13A-209ENST00000467124 CYP2C9P11712 490 aa4.78□□□□□ -1.64
VPS13A-209ENST00000467124 XRCC6P12956 609 aaKnown RBP eCLIP4.78□□□□□ -1.64
VPS13A-209ENST00000467124 NPPBP16860 134 aa4.78□□□□□ -1.64
VPS13A-209ENST00000467124 RXRAP19793 462 aa4.78□□□□□ -1.64
VPS13A-209ENST00000467124 ITGALP20701 1170 aa4.78□□□□□ -1.64
VPS13A-209ENST00000467124 KCNA3P22001 575 aa4.78□□□□□ -1.64
VPS13A-209ENST00000467124 MST1P26927 711 aa4.78□□□□□ -1.64
VPS13A-209ENST00000467124 DGKEP52429 567 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms