RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 C8orf48Q96LL4 319 aa16.96■□□□□ 0.31
GPC1-207ENST00000466624 PRKD2Q9BZL6 878 aa16.96■□□□□ 0.31
GPC1-207ENST00000466624 UBE2ZQ9H832 354 aaPredicted RBP16.96■□□□□ 0.31
GPC1-207ENST00000466624 PNPLA8Q9NP80 782 aa16.96■□□□□ 0.31
GPC1-207ENST00000466624 DMAP1Q9NPF5 467 aaPredicted RBP16.96■□□□□ 0.31
GPC1-207ENST00000466624 KRT82Q9NSB4 513 aa16.96■□□□□ 0.31
GPC1-207ENST00000466624 TSPAN16Q9UKR8 245 aa16.96■□□□□ 0.31
GPC1-207ENST00000466624 CAPN11Q9UMQ6 739 aa16.96■□□□□ 0.31
GPC1-207ENST00000466624 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.96■□□□□ 0.31
GPC1-207ENST00000466624 COG5Q9UP83 839 aa16.96■□□□□ 0.31
GPC1-207ENST00000466624 ASB3Q9Y575 518 aa16.96■□□□□ 0.31
GPC1-207ENST00000466624 ZNF638Q14966 1978 aaKnown RBP16.95■□□□□ 0.3
GPC1-207ENST00000466624 GOLGA6L3A6NEY3 463 aa16.95■□□□□ 0.3
GPC1-207ENST00000466624 SPDYE4A6NLX3 237 aa16.95■□□□□ 0.3
GPC1-207ENST00000466624 CLDN5O00501 218 aa16.95■□□□□ 0.3
GPC1-207ENST00000466624 XYLBO75191 536 aa16.95■□□□□ 0.3
GPC1-207ENST00000466624 AP1G2O75843 785 aa16.95■□□□□ 0.3
GPC1-207ENST00000466624 GYPCP04921 128 aa16.95■□□□□ 0.3
GPC1-207ENST00000466624 PNMA6AP0CW24 399 aaPredicted RBP16.95■□□□□ 0.3
GPC1-207ENST00000466624 FERP16591 822 aa16.95■□□□□ 0.3
GPC1-207ENST00000466624 NPR3P17342 541 aa16.95■□□□□ 0.3
GPC1-207ENST00000466624 ATF6P18850 670 aa16.95■□□□□ 0.3
GPC1-207ENST00000466624 ADORA2BP29275 332 aa16.95■□□□□ 0.3
GPC1-207ENST00000466624 EPHB3P54753 998 aa16.95■□□□□ 0.3
GPC1-207ENST00000466624 ZBED6P86452 979 aa16.95■□□□□ 0.3
GPC1-207ENST00000466624 ITIH3Q06033 890 aa16.95■□□□□ 0.3
GPC1-207ENST00000466624 TWF1Q12792 350 aa16.95■□□□□ 0.3
GPC1-207ENST00000466624 SYCE2Q6PIF2 218 aa16.95■□□□□ 0.3
GPC1-207ENST00000466624 ZNF677Q86XU0 584 aa16.95■□□□□ 0.3
GPC1-207ENST00000466624 ZNF397Q8NF99 534 aaPredicted RBP16.95■□□□□ 0.3
GPC1-207ENST00000466624 ZNF606Q8WXB4 792 aa16.95■□□□□ 0.3
GPC1-207ENST00000466624 ZSWIM1Q9BR11 485 aa16.95■□□□□ 0.3
GPC1-207ENST00000466624 DUSP16Q9BY84 665 aa16.95■□□□□ 0.3
GPC1-207ENST00000466624 HESX1Q9UBX0 185 aa16.95■□□□□ 0.3
GPC1-207ENST00000466624 PCDHGC3Q9UN70 934 aa16.95■□□□□ 0.3
GPC1-207ENST00000466624 CCDC195A0A1B0GUA6 201 aa16.94■□□□□ 0.3
GPC1-207ENST00000466624 LRRC53A6NM62 1247 aa16.94■□□□□ 0.3
GPC1-207ENST00000466624 THAP12O43422 761 aa16.94■□□□□ 0.3
GPC1-207ENST00000466624 RFPL2O75678 378 aa16.94■□□□□ 0.3
GPC1-207ENST00000466624 GFPT2O94808 682 aa16.94■□□□□ 0.3
GPC1-207ENST00000466624 CYP11B1P15538 503 aa16.94■□□□□ 0.3
GPC1-207ENST00000466624 BRD2P25440 801 aaKnown RBP16.94■□□□□ 0.3
GPC1-207ENST00000466624 ANXA13P27216 316 aa16.94■□□□□ 0.3
GPC1-207ENST00000466624 GRIK1P39086 918 aa16.94■□□□□ 0.3
GPC1-207ENST00000466624 PDE6CP51160 858 aa16.94■□□□□ 0.3
GPC1-207ENST00000466624 BCAT1P54687 386 aa16.94■□□□□ 0.3
GPC1-207ENST00000466624 SLC8A3P57103 927 aa16.94■□□□□ 0.3
GPC1-207ENST00000466624 DLX2Q07687 328 aaPredicted RBP16.94■□□□□ 0.3
GPC1-207ENST00000466624 VEPH1Q14D04 833 aa16.94■□□□□ 0.3
GPC1-207ENST00000466624 SKIV2LQ15477 1246 aaKnown RBP16.94■□□□□ 0.3
GPC1-207ENST00000466624 GOLGA7BQ2TAP0 167 aa16.94■□□□□ 0.3
GPC1-207ENST00000466624 PKDCCQ504Y2 493 aa16.94■□□□□ 0.3
GPC1-207ENST00000466624 CLEC20AQ6ZU45 233 aa16.94■□□□□ 0.3
GPC1-207ENST00000466624 ITIH5Q86UX2 942 aa16.94■□□□□ 0.3
GPC1-207ENST00000466624 SLC47A2Q86VL8 602 aa16.94■□□□□ 0.3
GPC1-207ENST00000466624 ELMOD1Q8N336 334 aa16.94■□□□□ 0.3
GPC1-207ENST00000466624 EPS8L1Q8TE68 723 aa16.94■□□□□ 0.3
GPC1-207ENST00000466624 PPM1EQ8WY54 764 aa16.94■□□□□ 0.3
GPC1-207ENST00000466624 SYN2Q92777 582 aaPredicted RBP16.94■□□□□ 0.3
GPC1-207ENST00000466624 HLA-CQ95604 372 aa16.94■□□□□ 0.3
GPC1-207ENST00000466624 PSMG2Q969U7 264 aa16.94■□□□□ 0.3
GPC1-207ENST00000466624 ZNF707Q96C28 371 aaPredicted RBP16.94■□□□□ 0.3
GPC1-207ENST00000466624 SMOQ99835 787 aa16.94■□□□□ 0.3
GPC1-207ENST00000466624 UBXN6Q9BZV1 441 aa16.94■□□□□ 0.3
GPC1-207ENST00000466624 S1PR5Q9H228 398 aa16.94■□□□□ 0.3
GPC1-207ENST00000466624 ADAM7Q9H2U9 754 aa16.94■□□□□ 0.3
GPC1-207ENST00000466624 TMEM30AQ9NV96 361 aa16.94■□□□□ 0.3
GPC1-207ENST00000466624 AIPL1Q9NZN9 384 aa16.94■□□□□ 0.3
GPC1-207ENST00000466624 LUC7L2Q9Y383 392 aaKnown RBP16.94■□□□□ 0.3
GPC1-207ENST00000466624 DENND4AQ7Z401 1863 aa16.94■□□□□ 0.3
GPC1-207ENST00000466624 F8VP50 259 aa16.93■□□□□ 0.3
GPC1-207ENST00000466624 TPM1P09493 284 aa16.93■□□□□ 0.3
GPC1-207ENST00000466624 SETSIPP0DME0 302 aa16.93■□□□□ 0.3
GPC1-207ENST00000466624 CDC25BP30305 580 aa16.93■□□□□ 0.3
GPC1-207ENST00000466624 CACNA2D1P54289 1103 aa16.93■□□□□ 0.3
GPC1-207ENST00000466624 BST2Q10589 180 aaKnown RBP16.93■□□□□ 0.3
GPC1-207ENST00000466624 ARID5BQ14865 1188 aa16.93■□□□□ 0.3
GPC1-207ENST00000466624 DDR2Q16832 855 aa16.93■□□□□ 0.3
GPC1-207ENST00000466624 SFMBT2Q5VUG0 894 aa16.93■□□□□ 0.3
GPC1-207ENST00000466624 GPR149Q86SP6 731 aa16.93■□□□□ 0.3
GPC1-207ENST00000466624 TTC30AQ86WT1 665 aa16.93■□□□□ 0.3
GPC1-207ENST00000466624 SCN4BQ8IWT1 228 aa16.93■□□□□ 0.3
GPC1-207ENST00000466624 SMRP1Q8NCR6 262 aa16.93■□□□□ 0.3
GPC1-207ENST00000466624 ZMIZ2Q8NF64 920 aa16.93■□□□□ 0.3
GPC1-207ENST00000466624 GRPEL1Q9HAV7 217 aa16.93■□□□□ 0.3
GPC1-207ENST00000466624 ACP6Q9NPH0 428 aa16.93■□□□□ 0.3
GPC1-207ENST00000466624 CD207Q9UJ71 328 aa16.93■□□□□ 0.3
GPC1-207ENST00000466624 DENND4CQ5VZ89 1909 aa16.93■□□□□ 0.3
GPC1-207ENST00000466624 OBSL1O75147 1896 aa16.93■□□□□ 0.3
GPC1-207ENST00000466624 NOTCH4Q99466 2003 aa16.92■□□□□ 0.3
GPC1-207ENST00000466624 XPO1O14980 1071 aaKnown RBP16.92■□□□□ 0.3
GPC1-207ENST00000466624 CCL16O15467 120 aa16.92■□□□□ 0.3
GPC1-207ENST00000466624 SOAT2O75908 522 aa16.92■□□□□ 0.3
GPC1-207ENST00000466624 MICAL2O94851 1124 aa16.92■□□□□ 0.3
GPC1-207ENST00000466624 CSH1P0DML2 217 aa16.92■□□□□ 0.3
GPC1-207ENST00000466624 CSH2P0DML3 217 aa16.92■□□□□ 0.3
GPC1-207ENST00000466624 CASP14P31944 242 aa16.92■□□□□ 0.3
GPC1-207ENST00000466624 PRKCIP41743 596 aa16.92■□□□□ 0.3
GPC1-207ENST00000466624 GPR15P49685 360 aa16.92■□□□□ 0.3
GPC1-207ENST00000466624 CDR1P51861 262 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms