RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 TTYH3Q9C0H2 523 aa2.91□□□□□ -1.94
CCDC93-205ENST00000466171 MRPS18AQ9NVS2 196 aaKnown RBP2.91□□□□□ -1.94
CCDC93-205ENST00000466171 KLHL13Q9P2N7 655 aa2.91□□□□□ -1.94
CCDC93-205ENST00000466171 HESX1Q9UBX0 185 aa2.91□□□□□ -1.94
CCDC93-205ENST00000466171 ABCF2Q9UG63 623 aa2.91□□□□□ -1.94
CCDC93-205ENST00000466171 ZNF112Q9UJU3 913 aa2.91□□□□□ -1.94
CCDC93-205ENST00000466171 PCDHA3Q9Y5H8 950 aa2.91□□□□□ -1.94
CCDC93-205ENST00000466171 CCDC187A0A096LP49 1063 aa2.9□□□□□ -1.95
CCDC93-205ENST00000466171 A1L4Q6 167 aa2.9□□□□□ -1.95
CCDC93-205ENST00000466171 PRSS29PA6NIE9 313 aa2.9□□□□□ -1.95
CCDC93-205ENST00000466171 PRR23D1E9PI22 279 aaPredicted RBP2.9□□□□□ -1.95
CCDC93-205ENST00000466171 RNF8O76064 485 aa2.9□□□□□ -1.95
CCDC93-205ENST00000466171 TJP3O95049 919 aa2.9□□□□□ -1.95
CCDC93-205ENST00000466171 PRR23D2P0DMB1 279 aaPredicted RBP2.9□□□□□ -1.95
CCDC93-205ENST00000466171 CYP2A6P11509 494 aaPredicted RBP2.9□□□□□ -1.95
CCDC93-205ENST00000466171 ATP5F1P24539 256 aaPredicted RBP2.9□□□□□ -1.95
CCDC93-205ENST00000466171 DSC2Q02487 901 aa2.9□□□□□ -1.95
CCDC93-205ENST00000466171 RBMS2Q15434 407 aaKnown RBP2.9□□□□□ -1.95
CCDC93-205ENST00000466171 C4orf46Q504U0 113 aa2.9□□□□□ -1.95
CCDC93-205ENST00000466171 FCRL6Q6DN72 434 aa2.9□□□□□ -1.95
CCDC93-205ENST00000466171 KIRREL2Q6UWL6 708 aa2.9□□□□□ -1.95
CCDC93-205ENST00000466171 ZNF813Q6ZN06 617 aa2.9□□□□□ -1.95
CCDC93-205ENST00000466171 IRF2BP2Q7Z5L9 587 aa2.9□□□□□ -1.95
CCDC93-205ENST00000466171 FAM177A1Q8N128 213 aaPredicted RBP2.9□□□□□ -1.95
CCDC93-205ENST00000466171 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP2.9□□□□□ -1.95
CCDC93-205ENST00000466171 NRACQ8N912 160 aa2.9□□□□□ -1.95
CCDC93-205ENST00000466171 ATG4AQ8WYN0 398 aa2.9□□□□□ -1.95
CCDC93-205ENST00000466171 R3HDM4Q96D70 268 aa2.9□□□□□ -1.95
CCDC93-205ENST00000466171 FAM167AQ96KS9 214 aa2.9□□□□□ -1.95
CCDC93-205ENST00000466171 MARK4Q96L34 752 aa2.9□□□□□ -1.95
CCDC93-205ENST00000466171 FYTTD1Q96QD9 318 aaKnown RBP2.9□□□□□ -1.95
CCDC93-205ENST00000466171 MACROD1Q9BQ69 325 aa2.9□□□□□ -1.95
CCDC93-205ENST00000466171 SCAF8Q9UPN6 1271 aaKnown RBP2.9□□□□□ -1.95
CCDC93-205ENST00000466171 TMEM232C9JQI7 657 aa2.89□□□□□ -1.95
CCDC93-205ENST00000466171 GCATO75600 419 aa2.89□□□□□ -1.95
CCDC93-205ENST00000466171 PIM1P11309 404 aaPredicted RBP2.89□□□□□ -1.95
CCDC93-205ENST00000466171 LILRA4P59901 499 aa2.89□□□□□ -1.95
CCDC93-205ENST00000466171 NOGQ13253 232 aa2.89□□□□□ -1.95
CCDC93-205ENST00000466171 BOP1Q14137 746 aaKnown RBP2.89□□□□□ -1.95
CCDC93-205ENST00000466171 CCDC157Q569K6 752 aa2.89□□□□□ -1.95
CCDC93-205ENST00000466171 L1TD1Q5T7N2 865 aaKnown RBP2.89□□□□□ -1.95
CCDC93-205ENST00000466171 SYDE2Q5VT97 1194 aa2.89□□□□□ -1.95
CCDC93-205ENST00000466171 RGS7BPQ6MZT1 257 aaPredicted RBP2.89□□□□□ -1.95
CCDC93-205ENST00000466171 HEATR3Q7Z4Q2 680 aa2.89□□□□□ -1.95
CCDC93-205ENST00000466171 CBARPQ8N350 705 aaPredicted RBP2.89□□□□□ -1.95
CCDC93-205ENST00000466171 BRIX1Q8TDN6 353 aaKnown RBP2.89□□□□□ -1.95
CCDC93-205ENST00000466171 ADAMTS18Q8TE60 1221 aa2.89□□□□□ -1.95
CCDC93-205ENST00000466171 COQ8BQ96D53 544 aa2.89□□□□□ -1.95
CCDC93-205ENST00000466171 LYZL4Q96KX0 146 aa2.89□□□□□ -1.95
CCDC93-205ENST00000466171 CIPCQ9C0C6 399 aa2.89□□□□□ -1.95
CCDC93-205ENST00000466171 MRPL46Q9H2W6 279 aaKnown RBP2.89□□□□□ -1.95
CCDC93-205ENST00000466171 LMBRD1Q9NUN5 540 aa2.89□□□□□ -1.95
CCDC93-205ENST00000466171 POT1Q9NUX5 634 aa2.89□□□□□ -1.95
CCDC93-205ENST00000466171 MTMR4Q9NYA4 1195 aa2.89□□□□□ -1.95
CCDC93-205ENST00000466171 SHOC2Q9UQ13 582 aa2.89□□□□□ -1.95
CCDC93-205ENST00000466171 LRP12Q9Y561 859 aa2.89□□□□□ -1.95
CCDC93-205ENST00000466171 LRRC14BA6NHZ5 514 aa2.88□□□□□ -1.95
CCDC93-205ENST00000466171 FAM90A8PA6NJQ4 464 aa2.88□□□□□ -1.95
CCDC93-205ENST00000466171 BTBD19C9JJ37 291 aa2.88□□□□□ -1.95
CCDC93-205ENST00000466171 FCHO1O14526 889 aa2.88□□□□□ -1.95
CCDC93-205ENST00000466171 PCDHGA12O60330 932 aa2.88□□□□□ -1.95
CCDC93-205ENST00000466171 PDE8BO95263 885 aa2.88□□□□□ -1.95
CCDC93-205ENST00000466171 FTLP02792 175 aaPredicted RBP2.88□□□□□ -1.95
CCDC93-205ENST00000466171 A1BGP04217 495 aa2.88□□□□□ -1.95
CCDC93-205ENST00000466171 FAM90A13PP0C7W8 464 aa2.88□□□□□ -1.95
CCDC93-205ENST00000466171 FAM90A24PP0C7X0 464 aa2.88□□□□□ -1.95
CCDC93-205ENST00000466171 MYCLP12524 364 aaPredicted RBP2.88□□□□□ -1.95
CCDC93-205ENST00000466171 PHKG2P15735 406 aa2.88□□□□□ -1.95
CCDC93-205ENST00000466171 CCND1P24385 295 aa2.88□□□□□ -1.95
CCDC93-205ENST00000466171 LRPAP1P30533 357 aa2.88□□□□□ -1.95
CCDC93-205ENST00000466171 PDE6CP51160 858 aa2.88□□□□□ -1.95
CCDC93-205ENST00000466171 RENBPP51606 427 aa2.88□□□□□ -1.95
CCDC93-205ENST00000466171 HK3P52790 923 aa2.88□□□□□ -1.95
CCDC93-205ENST00000466171 LINC00205P59089 165 aa2.88□□□□□ -1.95
CCDC93-205ENST00000466171 HTRA4P83105 476 aaPredicted RBP2.88□□□□□ -1.95
CCDC93-205ENST00000466171 SEMA3AQ14563 771 aa2.88□□□□□ -1.95
CCDC93-205ENST00000466171 FAM187BQ17R55 369 aa2.88□□□□□ -1.95
CCDC93-205ENST00000466171 ABCB5Q2M3G0 1257 aa2.88□□□□□ -1.95
CCDC93-205ENST00000466171 TMEM63BQ5T3F8 832 aa2.88□□□□□ -1.95
CCDC93-205ENST00000466171 C10orf25Q5T742 122 aa2.88□□□□□ -1.95
CCDC93-205ENST00000466171 MEX3CQ5U5Q3 659 aaKnown RBP2.88□□□□□ -1.95
CCDC93-205ENST00000466171 PIM3Q86V86 326 aa2.88□□□□□ -1.95
CCDC93-205ENST00000466171 DDX42Q86XP3 938 aaKnown RBP eCLIP2.88□□□□□ -1.95
CCDC93-205ENST00000466171 SLC15A3Q8IY34 581 aa2.88□□□□□ -1.95
CCDC93-205ENST00000466171 OSCP1Q8WVF1 389 aa2.88□□□□□ -1.95
CCDC93-205ENST00000466171 SOCS4Q8WXH5 440 aa2.88□□□□□ -1.95
CCDC93-205ENST00000466171 VCPIP1Q96JH7 1222 aa2.88□□□□□ -1.95
CCDC93-205ENST00000466171 CCDC17Q96LX7 622 aa2.88□□□□□ -1.95
CCDC93-205ENST00000466171 FOXP1Q9H334 677 aaPredicted RBP2.88□□□□□ -1.95
CCDC93-205ENST00000466171 TRMT13Q9NUP7 481 aaKnown RBP2.88□□□□□ -1.95
CCDC93-205ENST00000466171 NDRG4Q9ULP0 352 aaKnown RBP2.88□□□□□ -1.95
CCDC93-205ENST00000466171 SSX2IPQ9Y2D8 614 aa2.88□□□□□ -1.95
CCDC93-205ENST00000466171 PLEKHM1Q9Y4G2 1056 aa2.88□□□□□ -1.95
CCDC93-205ENST00000466171 PCDHGA9Q9Y5G4 932 aaKnown RBP2.88□□□□□ -1.95
CCDC93-205ENST00000466171 PCDHGA8Q9Y5G5 932 aa2.88□□□□□ -1.95
CCDC93-205ENST00000466171 PCDHGA7Q9Y5G6 932 aa2.88□□□□□ -1.95
CCDC93-205ENST00000466171 PCDHGA6Q9Y5G7 932 aa2.88□□□□□ -1.95
CCDC93-205ENST00000466171 PCDHGA3Q9Y5H0 932 aa2.88□□□□□ -1.95
CCDC93-205ENST00000466171 CD8B2A6NJW9 211 aa2.87□□□□□ -1.95
CCDC93-205ENST00000466171 H3BNX3 289 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms