RNA–Protein interactions for RNA: ENST00000465223.1

NCSTN-210, Transcript of nicastrin, humanhuman

TSL 2

Gene NCSTN, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-210ENST00000465223 YTHDC1Q96MU7 727 aaKnown RBP16.31■□□□□ 0.2
NCSTN-210ENST00000465223 TMEM134Q9H6X4 195 aa16.31■□□□□ 0.2
NCSTN-210ENST00000465223 CALCOCO1Q9P1Z2 691 aa16.31■□□□□ 0.2
NCSTN-210ENST00000465223 DACH1Q9UI36 760 aa16.31■□□□□ 0.2
NCSTN-210ENST00000465223 TRAV19A0A0A6YYK7 116 aa16.3■□□□□ 0.2
NCSTN-210ENST00000465223 TLX3O43711 291 aaPredicted RBP16.3■□□□□ 0.2
NCSTN-210ENST00000465223 USP17L7P0C7H9 530 aa16.3■□□□□ 0.2
NCSTN-210ENST00000465223 EIF2S3P41091 472 aaKnown RBP16.3■□□□□ 0.2
NCSTN-210ENST00000465223 NPTX2P47972 431 aa16.3■□□□□ 0.2
NCSTN-210ENST00000465223 LILRA4P59901 499 aa16.3■□□□□ 0.2
NCSTN-210ENST00000465223 C12orf40Q86WS4 652 aa16.3■□□□□ 0.2
NCSTN-210ENST00000465223 SPPL2BQ8TCT7 592 aa16.3■□□□□ 0.2
NCSTN-210ENST00000465223 LRRC15Q8TF66 581 aa16.3■□□□□ 0.2
NCSTN-210ENST00000465223 KIFAP3Q92845 792 aa16.3■□□□□ 0.2
NCSTN-210ENST00000465223 MTMR9Q96QG7 549 aa16.3■□□□□ 0.2
NCSTN-210ENST00000465223 TMEM206Q9H813 350 aa16.3■□□□□ 0.2
NCSTN-210ENST00000465223 UBQLN1Q9UMX0 589 aaKnown RBP16.3■□□□□ 0.2
NCSTN-210ENST00000465223 SNX14Q9Y5W7 946 aa16.3■□□□□ 0.2
NCSTN-210ENST00000465223 TCHHQ07283 1943 aa16.29■□□□□ 0.2
NCSTN-210ENST00000465223 STK36Q9NRP7 1315 aa16.29■□□□□ 0.2
NCSTN-210ENST00000465223 KAT7O95251 611 aa16.29■□□□□ 0.2
NCSTN-210ENST00000465223 CYP17A1P05093 508 aa16.29■□□□□ 0.2
NCSTN-210ENST00000465223 CSH1P0DML2 217 aa16.29■□□□□ 0.2
NCSTN-210ENST00000465223 CSH2P0DML3 217 aa16.29■□□□□ 0.2
NCSTN-210ENST00000465223 KDSRQ06136 332 aa16.29■□□□□ 0.2
NCSTN-210ENST00000465223 STK3Q13188 491 aa16.29■□□□□ 0.2
NCSTN-210ENST00000465223 NOLC1Q14978 699 aaKnown RBP eCLIP16.29■□□□□ 0.2
NCSTN-210ENST00000465223 HSF5Q4G112 596 aaPredicted RBP16.29■□□□□ 0.2
NCSTN-210ENST00000465223 LRRC69Q6ZNQ3 347 aa16.29■□□□□ 0.2
NCSTN-210ENST00000465223 ERLEC1Q96DZ1 483 aa16.29■□□□□ 0.2
NCSTN-210ENST00000465223 PNKPQ96T60 521 aa16.29■□□□□ 0.2
NCSTN-210ENST00000465223 TMEM60Q9H2L4 133 aa16.29■□□□□ 0.2
NCSTN-210ENST00000465223 CD93Q9NPY3 652 aa16.29■□□□□ 0.2
NCSTN-210ENST00000465223 TMLHEQ9NVH6 421 aa16.29■□□□□ 0.2
NCSTN-210ENST00000465223 DNMT3LQ9UJW3 386 aa16.29■□□□□ 0.2
NCSTN-210ENST00000465223 CYP8B1Q9UNU6 501 aa16.29■□□□□ 0.2
NCSTN-210ENST00000465223 PTPRQQ9UMZ3 2332 aa16.29■□□□□ 0.2
NCSTN-210ENST00000465223 SCN1AP35498 2009 aa16.28■□□□□ 0.2
NCSTN-210ENST00000465223 TTC26A0AVF1 554 aa16.28■□□□□ 0.2
NCSTN-210ENST00000465223 C2orf78A6NCI8 922 aa16.28■□□□□ 0.2
NCSTN-210ENST00000465223 MYMKA6NI61 221 aa16.28■□□□□ 0.2
NCSTN-210ENST00000465223 PLK4O00444 970 aa16.28■□□□□ 0.2
NCSTN-210ENST00000465223 NEMFO60524 1076 aa16.28■□□□□ 0.2
NCSTN-210ENST00000465223 APODP05090 189 aa16.28■□□□□ 0.2
NCSTN-210ENST00000465223 CYP3A5P20815 502 aa16.28■□□□□ 0.2
NCSTN-210ENST00000465223 TNFSF9P41273 254 aa16.28■□□□□ 0.2
NCSTN-210ENST00000465223 ZXDBP98169 803 aa16.28■□□□□ 0.2
NCSTN-210ENST00000465223 KCNC4Q03721 635 aa16.28■□□□□ 0.2
NCSTN-210ENST00000465223 SCRN1Q12765 414 aa16.28■□□□□ 0.2
NCSTN-210ENST00000465223 TOB2Q14106 344 aaPredicted RBP16.28■□□□□ 0.2
NCSTN-210ENST00000465223 CCDC157Q569K6 752 aa16.28■□□□□ 0.2
NCSTN-210ENST00000465223 GPR155Q7Z3F1 870 aa16.28■□□□□ 0.2
NCSTN-210ENST00000465223 SPATA18Q8TC71 538 aa16.28■□□□□ 0.2
NCSTN-210ENST00000465223 C2orf15Q8WU43 125 aaKnown RBP16.28■□□□□ 0.2
NCSTN-210ENST00000465223 KCNB2Q92953 911 aa16.28■□□□□ 0.2
NCSTN-210ENST00000465223 PI4K2AQ9BTU6 479 aa16.28■□□□□ 0.2
NCSTN-210ENST00000465223 HAPLN2Q9GZV7 340 aa16.28■□□□□ 0.2
NCSTN-210ENST00000465223 FAM124BQ9H5Z6 455 aaPredicted RBP16.28■□□□□ 0.2
NCSTN-210ENST00000465223 GCNT4Q9P109 453 aa16.28■□□□□ 0.2
NCSTN-210ENST00000465223 ARHGAP28Q9P2N2 729 aa16.28■□□□□ 0.2
NCSTN-210ENST00000465223 TEX51A0A1B0GUA7 166 aa16.27■□□□□ 0.2
NCSTN-210ENST00000465223 LACTBL1A8MY62 500 aa16.27■□□□□ 0.2
NCSTN-210ENST00000465223 SCAMP3O14828 347 aaKnown RBP16.27■□□□□ 0.2
NCSTN-210ENST00000465223 PRPF40AO75400 957 aaKnown RBP16.27■□□□□ 0.2
NCSTN-210ENST00000465223 CYP11A1P05108 521 aa16.27■□□□□ 0.2
NCSTN-210ENST00000465223 WASP42768 502 aa16.27■□□□□ 0.2
NCSTN-210ENST00000465223 SRSF1Q07955 248 aaKnown RBP eCLIP16.27■□□□□ 0.2
NCSTN-210ENST00000465223 ECM1Q16610 540 aa16.27■□□□□ 0.2
NCSTN-210ENST00000465223 DDR2Q16832 855 aa16.27■□□□□ 0.2
NCSTN-210ENST00000465223 FAM181AQ8N9Y4 354 aa16.27■□□□□ 0.2
NCSTN-210ENST00000465223 RHBDD1Q8TEB9 315 aa16.27■□□□□ 0.2
NCSTN-210ENST00000465223 TNFRSF25Q93038 417 aa16.27■□□□□ 0.2
NCSTN-210ENST00000465223 ZNF419Q96HQ0 510 aaPredicted RBP16.27■□□□□ 0.2
NCSTN-210ENST00000465223 KIF2CQ99661 725 aa16.27■□□□□ 0.2
NCSTN-210ENST00000465223 BHMT2Q9H2M3 363 aa16.27■□□□□ 0.2
NCSTN-210ENST00000465223 GAREM1Q9H706 876 aa16.27■□□□□ 0.2
NCSTN-210ENST00000465223 KMT5AQ9NQR1 393 aa16.27■□□□□ 0.2
NCSTN-210ENST00000465223 TM7SF3Q9NS93 570 aa16.27■□□□□ 0.2
NCSTN-210ENST00000465223 SUSD2Q9UGT4 822 aa16.27■□□□□ 0.2
NCSTN-210ENST00000465223 BTBD3Q9Y2F9 522 aa16.27■□□□□ 0.2
NCSTN-210ENST00000465223 FNDC3AQ9Y2H6 1198 aaKnown RBP16.27■□□□□ 0.2
NCSTN-210ENST00000465223 COL5A1P20908 1838 aaPredicted RBP16.26■□□□□ 0.19
NCSTN-210ENST00000465223 CILPO75339 1184 aa16.26■□□□□ 0.19
NCSTN-210ENST00000465223 HLA-EP13747 358 aa16.26■□□□□ 0.19
NCSTN-210ENST00000465223 GNSP15586 552 aa16.26■□□□□ 0.19
NCSTN-210ENST00000465223 DHCR24Q15392 516 aa16.26■□□□□ 0.19
NCSTN-210ENST00000465223 SMAD1Q15797 465 aaKnown RBP16.26■□□□□ 0.19
NCSTN-210ENST00000465223 FILIP1Q7Z7B0 1213 aa16.26■□□□□ 0.19
NCSTN-210ENST00000465223 DAW1Q8N136 415 aa16.26■□□□□ 0.19
NCSTN-210ENST00000465223 ZDHHC5Q9C0B5 715 aa16.26■□□□□ 0.19
NCSTN-210ENST00000465223 PLEKHA5Q9HAU0 1116 aa16.26■□□□□ 0.19
NCSTN-210ENST00000465223 ARHGEF4Q9NR80 690 aa16.26■□□□□ 0.19
NCSTN-210ENST00000465223 PCDHB5Q9Y5E4 795 aa16.26■□□□□ 0.19
NCSTN-210ENST00000465223 A0A0A0MRY4 1105 aa16.25■□□□□ 0.19
NCSTN-210ENST00000465223 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.25■□□□□ 0.19
NCSTN-210ENST00000465223 BTBD18B2RXH4 712 aa16.25■□□□□ 0.19
NCSTN-210ENST00000465223 SLC16A4O15374 487 aa16.25■□□□□ 0.19
NCSTN-210ENST00000465223 TOM1L1O75674 476 aa16.25■□□□□ 0.19
NCSTN-210ENST00000465223 NOL4O94818 638 aa16.25■□□□□ 0.19
NCSTN-210ENST00000465223 TCF3P15923 654 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms