RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 SENP8Q96LD8 212 aa18.61■□□□□ 0.57
CPSF4-209ENST00000465132 MMS19Q96T76 1030 aa18.61■□□□□ 0.57
CPSF4-209ENST00000465132 CORO1BQ9BR76 489 aa18.61■□□□□ 0.57
CPSF4-209ENST00000465132 CYP3A43Q9HB55 503 aa18.61■□□□□ 0.57
CPSF4-209ENST00000465132 CYP4F11Q9HBI6 524 aa18.61■□□□□ 0.57
CPSF4-209ENST00000465132 FBXO4Q9UKT5 387 aa18.61■□□□□ 0.57
CPSF4-209ENST00000465132 SNX9Q9Y5X1 595 aa18.61■□□□□ 0.57
CPSF4-209ENST00000465132 LAMTOR5O43504 91 aa18.6■□□□□ 0.57
CPSF4-209ENST00000465132 VNN1O95497 513 aa18.6■□□□□ 0.57
CPSF4-209ENST00000465132 LHX1P48742 406 aa18.6■□□□□ 0.57
CPSF4-209ENST00000465132 NOP14P78316 857 aaKnown RBP18.6■□□□□ 0.57
CPSF4-209ENST00000465132 FANCCQ00597 558 aa18.6■□□□□ 0.57
CPSF4-209ENST00000465132 CTXN3Q4LDR2 81 aa18.6■□□□□ 0.57
CPSF4-209ENST00000465132 TPGS2Q68CL5 300 aa18.6■□□□□ 0.57
CPSF4-209ENST00000465132 TPRG1Q6ZUI0 275 aa18.6■□□□□ 0.57
CPSF4-209ENST00000465132 FMNL3Q8IVF7 1028 aa18.6■□□□□ 0.57
CPSF4-209ENST00000465132 KIAA2013Q8IYS2 634 aa18.6■□□□□ 0.57
CPSF4-209ENST00000465132 CXorf38Q8TB03 319 aa18.6■□□□□ 0.57
CPSF4-209ENST00000465132 RUBCNQ92622 972 aa18.6■□□□□ 0.57
CPSF4-209ENST00000465132 CLDN23Q96B33 292 aa18.6■□□□□ 0.57
CPSF4-209ENST00000465132 ELSPBP1Q96BH3 223 aa18.6■□□□□ 0.57
CPSF4-209ENST00000465132 PCMTD1Q96MG8 357 aaPredicted RBP18.6■□□□□ 0.57
CPSF4-209ENST00000465132 NELL2Q99435 816 aa18.6■□□□□ 0.57
CPSF4-209ENST00000465132 NIF3L1Q9GZT8 377 aa18.6■□□□□ 0.57
CPSF4-209ENST00000465132 HSD3B7Q9H2F3 369 aa18.6■□□□□ 0.57
CPSF4-209ENST00000465132 INSL5Q9Y5Q6 135 aa18.6■□□□□ 0.57
CPSF4-209ENST00000465132 SCN1AP35498 2009 aa18.6■□□□□ 0.57
CPSF4-209ENST00000465132 CACNA1IQ9P0X4 2223 aa18.59■□□□□ 0.57
CPSF4-209ENST00000465132 MICAL2O94851 1124 aa18.59■□□□□ 0.57
CPSF4-209ENST00000465132 CYP11A1P05108 521 aa18.59■□□□□ 0.57
CPSF4-209ENST00000465132 ATP1A3P13637 1013 aa18.59■□□□□ 0.57
CPSF4-209ENST00000465132 FCARP24071 287 aa18.59■□□□□ 0.57
CPSF4-209ENST00000465132 MFAP3P55082 362 aa18.59■□□□□ 0.57
CPSF4-209ENST00000465132 YWHAHQ04917 246 aaPredicted RBP18.59■□□□□ 0.57
CPSF4-209ENST00000465132 SUMF1Q8NBK3 374 aa18.59■□□□□ 0.57
CPSF4-209ENST00000465132 TCEAL4Q96EI5 215 aa18.59■□□□□ 0.57
CPSF4-209ENST00000465132 HINFPQ9BQA5 517 aa18.59■□□□□ 0.57
CPSF4-209ENST00000465132 XYLT2Q9H1B5 865 aa18.59■□□□□ 0.57
CPSF4-209ENST00000465132 SNX25Q9H3E2 840 aa18.59■□□□□ 0.57
CPSF4-209ENST00000465132 NXF1Q9UBU9 619 aaKnown RBP18.59■□□□□ 0.57
CPSF4-209ENST00000465132 A0A1B0GTH6 734 aa18.58■□□□□ 0.56
CPSF4-209ENST00000465132 A0A1W2PQC6 194 aa18.58■□□□□ 0.56
CPSF4-209ENST00000465132 ZNF197O14709 1029 aa18.58■□□□□ 0.56
CPSF4-209ENST00000465132 TACC1O75410 805 aa18.58■□□□□ 0.56
CPSF4-209ENST00000465132 TARSP26639 723 aaKnown RBP18.58■□□□□ 0.56
CPSF4-209ENST00000465132 PCSK1P29120 753 aa18.58■□□□□ 0.56
CPSF4-209ENST00000465132 CCR2P41597 374 aa18.58■□□□□ 0.56
CPSF4-209ENST00000465132 GCNT1Q02742 428 aa18.58■□□□□ 0.56
CPSF4-209ENST00000465132 CSTF1Q05048 431 aaKnown RBP18.58■□□□□ 0.56
CPSF4-209ENST00000465132 FAM78AQ5JUQ0 283 aa18.58■□□□□ 0.56
CPSF4-209ENST00000465132 ZNF280DQ6N043 979 aa18.58■□□□□ 0.56
CPSF4-209ENST00000465132 ZNF852Q6ZMS4 543 aa18.58■□□□□ 0.56
CPSF4-209ENST00000465132 PDZD4Q76G19 769 aaPredicted RBP18.58■□□□□ 0.56
CPSF4-209ENST00000465132 DNASE1L2Q92874 299 aa18.58■□□□□ 0.56
CPSF4-209ENST00000465132 RMDN1Q96DB5 314 aa18.58■□□□□ 0.56
CPSF4-209ENST00000465132 ERGIC2Q96RQ1 377 aa18.58■□□□□ 0.56
CPSF4-209ENST00000465132 INTS2Q9H0H0 1204 aaKnown RBP18.58■□□□□ 0.56
CPSF4-209ENST00000465132 RTN4Q9NQC3 1192 aaKnown RBP18.58■□□□□ 0.56
CPSF4-209ENST00000465132 HEBP1Q9NRV9 189 aa18.58■□□□□ 0.56
CPSF4-209ENST00000465132 AFF4Q9UHB7 1163 aaKnown RBP18.58■□□□□ 0.56
CPSF4-209ENST00000465132 MIA3Q5JRA6 1907 aa18.58■□□□□ 0.56
CPSF4-209ENST00000465132 ZNF292O60281 2723 aa18.58■□□□□ 0.56
CPSF4-209ENST00000465132 FANCMQ8IYD8 2048 aa18.57■□□□□ 0.56
CPSF4-209ENST00000465132 SHISA7A6NL88 538 aa18.57■□□□□ 0.56
CPSF4-209ENST00000465132 NRG2O14511 850 aaPredicted RBP18.57■□□□□ 0.56
CPSF4-209ENST00000465132 PPEF2O14830 753 aa18.57■□□□□ 0.56
CPSF4-209ENST00000465132 NCAM2O15394 837 aa18.57■□□□□ 0.56
CPSF4-209ENST00000465132 RPS9P46781 194 aaKnown RBP18.57■□□□□ 0.56
CPSF4-209ENST00000465132 PLCB2Q00722 1185 aa18.57■□□□□ 0.56
CPSF4-209ENST00000465132 ADCY1Q08828 1119 aa18.57■□□□□ 0.56
CPSF4-209ENST00000465132 CYP4A22Q5TCH4 519 aa18.57■□□□□ 0.56
CPSF4-209ENST00000465132 OVOS1Q6IE37 1185 aa18.57■□□□□ 0.56
CPSF4-209ENST00000465132 TRIM65Q6PJ69 517 aa18.57■□□□□ 0.56
CPSF4-209ENST00000465132 ELMOD1Q8N336 334 aa18.57■□□□□ 0.56
CPSF4-209ENST00000465132 DCLK2Q8N568 766 aa18.57■□□□□ 0.56
CPSF4-209ENST00000465132 NEK11Q8NG66 645 aa18.57■□□□□ 0.56
CPSF4-209ENST00000465132 ZFP14Q9HCL3 533 aa18.57■□□□□ 0.56
CPSF4-209ENST00000465132 PLCB1Q9NQ66 1216 aa18.57■□□□□ 0.56
CPSF4-209ENST00000465132 APEX2Q9UBZ4 518 aa18.57■□□□□ 0.56
CPSF4-209ENST00000465132 MAFFQ9ULX9 164 aa18.57■□□□□ 0.56
CPSF4-209ENST00000465132 MRPS17Q9Y2R5 130 aaKnown RBP18.57■□□□□ 0.56
CPSF4-209ENST00000465132 PCDHGA2Q9Y5H1 932 aa18.57■□□□□ 0.56
CPSF4-209ENST00000465132 DCHS1Q96JQ0 3298 aa18.56■□□□□ 0.56
CPSF4-209ENST00000465132 OR6C75A6NL08 312 aa18.56■□□□□ 0.56
CPSF4-209ENST00000465132 SPTLC1O15269 473 aa18.56■□□□□ 0.56
CPSF4-209ENST00000465132 OAZ2O95190 189 aa18.56■□□□□ 0.56
CPSF4-209ENST00000465132 SMARCB1Q12824 385 aa18.56■□□□□ 0.56
CPSF4-209ENST00000465132 FZD5Q13467 585 aa18.56■□□□□ 0.56
CPSF4-209ENST00000465132 GRM2Q14416 872 aa18.56■□□□□ 0.56
CPSF4-209ENST00000465132 MAPRE1Q15691 268 aaKnown RBP18.56■□□□□ 0.56
CPSF4-209ENST00000465132 IQCEQ6IPM2 695 aa18.56■□□□□ 0.56
CPSF4-209ENST00000465132 SARM1Q6SZW1 724 aa18.56■□□□□ 0.56
CPSF4-209ENST00000465132 UNC93AQ86WB7 457 aa18.56■□□□□ 0.56
CPSF4-209ENST00000465132 ADGRF2Q8IZF7 708 aa18.56■□□□□ 0.56
CPSF4-209ENST00000465132 HS6ST3Q8IZP7 471 aa18.56■□□□□ 0.56
CPSF4-209ENST00000465132 PPM1KQ8N3J5 372 aa18.56■□□□□ 0.56
CPSF4-209ENST00000465132 TNIP3Q96KP6 325 aa18.56■□□□□ 0.56
CPSF4-209ENST00000465132 ZNF512Q96ME7 567 aaPredicted RBP18.56■□□□□ 0.56
CPSF4-209ENST00000465132 ASB16Q96NS5 453 aa18.56■□□□□ 0.56
CPSF4-209ENST00000465132 CRACR2AQ9BSW2 395 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms