RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 ZNF287Q9HBT7 754 aa3.78□□□□□ -1.81
COL8A1-205ENST00000463753 ECHDC1Q9NTX5 307 aa3.78□□□□□ -1.81
COL8A1-205ENST00000463753 ZNF358Q9NW07 568 aa3.78□□□□□ -1.81
COL8A1-205ENST00000463753 DDX43Q9NXZ2 648 aaKnown RBP3.78□□□□□ -1.81
COL8A1-205ENST00000463753 HMG20BQ9P0W2 317 aa3.78□□□□□ -1.81
COL8A1-205ENST00000463753 GMIPQ9P107 970 aa3.78□□□□□ -1.81
COL8A1-205ENST00000463753 GMPR2Q9P2T1 348 aaKnown RBP3.78□□□□□ -1.81
COL8A1-205ENST00000463753 UVRAGQ9P2Y5 699 aa3.78□□□□□ -1.81
COL8A1-205ENST00000463753 KLHL3Q9UH77 587 aa3.78□□□□□ -1.81
COL8A1-205ENST00000463753 ZFP69BQ9UJL9 534 aa3.78□□□□□ -1.81
COL8A1-205ENST00000463753 KIAA1024Q9UPX6 916 aa3.78□□□□□ -1.81
COL8A1-205ENST00000463753 SCINQ9Y6U3 715 aa3.78□□□□□ -1.81
COL8A1-205ENST00000463753 PDE4DIPQ5VU43 2346 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 A0A0G2JLW4 131 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 RSPH10B2B2RC85 870 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 J3QRK9 145 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 TAF4O00268 1085 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 AQP9O43315 295 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 KLHL41O60662 606 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 ZC3H11AO75152 810 aaKnown RBP eCLIP3.77□□□□□ -1.81
COL8A1-205ENST00000463753 GAS8O95995 478 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 NTRK1P04629 796 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 CYP21A2P08686 494 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 RSPH10BP0C881 870 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 T-ENOLP0DO92 83 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 KRT10P13645 584 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 PDIA3P30101 505 aaKnown RBP3.77□□□□□ -1.81
COL8A1-205ENST00000463753 PPARGP37231 505 aaPredicted RBP3.77□□□□□ -1.81
COL8A1-205ENST00000463753 CPA2P48052 419 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 CASP5P51878 434 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 PLTPP55058 493 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 AQP4P55087 323 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 EIF6P56537 245 aaKnown RBP3.77□□□□□ -1.81
COL8A1-205ENST00000463753 C21orf59P57076 290 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 DSTNP60981 165 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 PLCB3Q01970 1234 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 DPYDQ12882 1025 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 DNAJC3Q13217 504 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 TUBA3CQ13748 450 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 GRIK5Q16478 980 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 CARTPTQ16568 116 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 EXOC3L4Q17RC7 722 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 CDONQ4KMG0 1287 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 GJC2Q5T442 439 aaPredicted RBP3.77□□□□□ -1.81
COL8A1-205ENST00000463753 IL23RQ5VWK5 629 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 RNF43Q68DV7 783 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 AAGABQ6PD74 315 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 TUBA3EQ6PEY2 450 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 ZNF662Q6ZS27 426 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 MCM10Q7L590 875 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 OTOP1Q7RTM1 612 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 VPS37DQ86XT2 251 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 DNAAF5Q86Y56 855 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 HACE1Q8IYU2 909 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 FAM9CQ8IZT9 166 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 CLIP4Q8N3C7 705 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 CSGALNACT2Q8N6G5 542 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 MB21D1Q8N884 522 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 FBXL8Q96CD0 374 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 PURBQ96QR8 312 aaKnown RBP3.77□□□□□ -1.81
COL8A1-205ENST00000463753 SPOCK3Q9BQ16 436 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 GOLPH3Q9H4A6 298 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 NEK6Q9HC98 313 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 C8orf4Q9NR00 106 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 GIMAP4Q9NUV9 329 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 SLC38A7Q9NVC3 462 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 THAP1Q9NVV9 213 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 AGO2Q9UKV8 859 aaKnown RBP3.77□□□□□ -1.81
COL8A1-205ENST00000463753 TBC1D30Q9Y2I9 924 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 RWDD3Q9Y3V2 267 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 ZNF804BA4D1E1 1349 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 A0A0B4J203 849 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 SLC35F4A4IF30 521 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 TRIM49BA6NDI0 452 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 KRIT1O00522 736 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 RASGRF2O14827 1237 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 XPO1O14980 1071 aaKnown RBP3.77□□□□□ -1.81
COL8A1-205ENST00000463753 PRPF3O43395 683 aaKnown RBP3.77□□□□□ -1.81
COL8A1-205ENST00000463753 AGTP01019 485 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 TFAP2AP05549 437 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 PCP11498 1178 aaKnown RBP3.77□□□□□ -1.81
COL8A1-205ENST00000463753 PTGS2P35354 604 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 EIF4A3P38919 411 aaKnown RBP3.77□□□□□ -1.81
COL8A1-205ENST00000463753 BTDP43251 543 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 POLD2P49005 469 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 CENPAP49450 140 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 THOP1P52888 689 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 PPP2R2BQ00005 443 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 DR1Q01658 176 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 CENPCQ03188 943 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 ASPHQ12797 758 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 IFIT5Q13325 482 aaKnown RBP3.77□□□□□ -1.81
COL8A1-205ENST00000463753 GNA13Q14344 377 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 KRT81Q14533 505 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 KCTD2Q14681 263 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 LONRF1Q17RB8 773 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.77□□□□□ -1.81
COL8A1-205ENST00000463753 SFT2D3Q587I9 215 aa3.77□□□□□ -1.81
COL8A1-205ENST00000463753 TDRD12Q587J7 1177 aaKnown RBP3.77□□□□□ -1.81
COL8A1-205ENST00000463753 NIPAL1Q6NVV3 410 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms