RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 NPTXRO95502 500 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 HLA-DOAP06340 250 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 GDF5P43026 501 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 ST3GAL1Q11201 340 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 GRM7Q14831 915 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 SEPT2Q15019 361 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 CCDC144BQ3MJ40 725 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 FNDC3BQ53EP0 1204 aaKnown RBP4.19□□□□□ -1.74
SCFD1-204ENST00000463622 ZSCAN25Q6NSZ9 544 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 CYB5R4Q7L1T6 521 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 CHST3Q7LGC8 479 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 POLNQ7Z5Q5 900 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 RPUSD2Q8IZ73 545 aaKnown RBP4.19□□□□□ -1.74
SCFD1-204ENST00000463622 PCSK9Q8NBP7 692 aaKnown RBP4.19□□□□□ -1.74
SCFD1-204ENST00000463622 RPL10LQ96L21 214 aaKnown RBP4.19□□□□□ -1.74
SCFD1-204ENST00000463622 GLT1D1Q96MS3 346 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 NOL10Q9BSC4 688 aaKnown RBP4.19□□□□□ -1.74
SCFD1-204ENST00000463622 LRRC2Q9BYS8 371 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 C22orf23Q9BZE7 217 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 UPF3BQ9BZI7 483 aaKnown RBP4.19□□□□□ -1.74
SCFD1-204ENST00000463622 PIF1Q9H611 641 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 HECAQ9UBI9 543 aaPredicted RBP4.19□□□□□ -1.74
SCFD1-204ENST00000463622 ING1Q9UK53 422 aaPredicted RBP4.19□□□□□ -1.74
SCFD1-204ENST00000463622 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.19□□□□□ -1.74
SCFD1-204ENST00000463622 SLC30A1Q9Y6M5 507 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 LAMA4Q16363 1823 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 GRIN2DO15399 1336 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 SYNRGQ9UMZ2 1314 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 A0A0U1RQG5 324 aaPredicted RBP4.19□□□□□ -1.74
SCFD1-204ENST00000463622 E7EWF7 191 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 HIP1O00291 1037 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 NMT2O60551 498 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 FZD7O75084 574 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 LARGE1O95461 756 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 PRLP01236 227 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 ASLP04424 464 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 PGK2P07205 417 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 ASGR1P07306 291 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 ALADP13716 330 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 ACVRL1P37023 503 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 TDO2P48775 406 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 TAP1Q03518 808 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 PPARAQ07869 468 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 KLF10Q13118 480 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 FOXE3Q13461 319 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 ALX1Q15699 326 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 ARHGAP44Q17R89 818 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 C12orf60Q5U649 245 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 KRT40Q6A162 431 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 RNF207Q6ZRF8 634 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 CERS3Q8IU89 383 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 C1orf210Q8IVY1 113 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 MB21D2Q8IYB1 491 aaPredicted RBP4.19□□□□□ -1.74
SCFD1-204ENST00000463622 KIAA1958Q8N8K9 716 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 REPS2Q8NFH8 660 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 PHOSPHO2Q8TCD6 241 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 RUFY2Q8WXA3 655 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 EDAQ92838 391 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 SORCS2Q96PQ0 1159 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 SEZ6LQ9BYH1 1024 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 CRNKL1Q9BZJ0 848 aaKnown RBP4.19□□□□□ -1.74
SCFD1-204ENST00000463622 CSRNP2Q9H175 543 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 PCIF1Q9H4Z3 704 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 CABP5Q9NP86 173 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 TLR9Q9NR96 1032 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 MCM9Q9NXL9 1143 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 H2AFY2Q9P0M6 372 aaPredicted RBP4.19□□□□□ -1.74
SCFD1-204ENST00000463622 CNPY2Q9Y2B0 182 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 TMX2Q9Y320 296 aa4.19□□□□□ -1.74
SCFD1-204ENST00000463622 TRANK1O15050 2925 aa4.18□□□□□ -1.74
SCFD1-204ENST00000463622 C2orf78A6NCI8 922 aa4.18□□□□□ -1.74
SCFD1-204ENST00000463622 B4E1Z4 1266 aa4.18□□□□□ -1.74
SCFD1-204ENST00000463622 VWA5AO00534 786 aa4.18□□□□□ -1.74
SCFD1-204ENST00000463622 ADCY6O43306 1168 aa4.18□□□□□ -1.74
SCFD1-204ENST00000463622 SLC26A4O43511 780 aa4.18□□□□□ -1.74
SCFD1-204ENST00000463622 ATP2A2P16615 1042 aaKnown RBP4.18□□□□□ -1.74
SCFD1-204ENST00000463622 RPS19P39019 145 aaKnown RBP4.18□□□□□ -1.74
SCFD1-204ENST00000463622 RIN1Q13671 783 aa4.18□□□□□ -1.74
SCFD1-204ENST00000463622 ACVR2BQ13705 512 aa4.18□□□□□ -1.74
SCFD1-204ENST00000463622 KCTD2Q14681 263 aa4.18□□□□□ -1.74
SCFD1-204ENST00000463622 LEXMQ3ZCV2 418 aa4.18□□□□□ -1.74
SCFD1-204ENST00000463622 PRAMEF9Q5VWM5 478 aa4.18□□□□□ -1.74
SCFD1-204ENST00000463622 CDCA2Q69YH5 1023 aaPredicted RBP4.18□□□□□ -1.74
SCFD1-204ENST00000463622 SLFN12LQ6IEE8 588 aa4.18□□□□□ -1.74
SCFD1-204ENST00000463622 TMED8Q6PL24 325 aaPredicted RBP4.18□□□□□ -1.74
SCFD1-204ENST00000463622 NOL8Q76FK4 1167 aaKnown RBP4.18□□□□□ -1.74
SCFD1-204ENST00000463622 SGMS1Q86VZ5 419 aa4.18□□□□□ -1.74
SCFD1-204ENST00000463622 RAB11FIP4Q86YS3 637 aa4.18□□□□□ -1.74
SCFD1-204ENST00000463622 IL17RAQ96F46 866 aa4.18□□□□□ -1.74
SCFD1-204ENST00000463622 TUBGCP5Q96RT8 1024 aa4.18□□□□□ -1.74
SCFD1-204ENST00000463622 FOXB1Q99853 325 aa4.18□□□□□ -1.74
SCFD1-204ENST00000463622 NAPBQ9H115 298 aa4.18□□□□□ -1.74
SCFD1-204ENST00000463622 WNT8AQ9H1J5 351 aa4.18□□□□□ -1.74
SCFD1-204ENST00000463622 HIPK3Q9H422 1215 aa4.18□□□□□ -1.74
SCFD1-204ENST00000463622 PRRC2BQ5JSZ5 2229 aaKnown RBP4.17□□□□□ -1.74
SCFD1-204ENST00000463622 ZMYM6O95789 1325 aa4.17□□□□□ -1.74
SCFD1-204ENST00000463622 UMODL1Q5DID0 1318 aa4.17□□□□□ -1.74
SCFD1-204ENST00000463622 UBA6A0AVT1 1052 aaPredicted RBP4.17□□□□□ -1.74
SCFD1-204ENST00000463622 CABYRO75952 493 aa4.17□□□□□ -1.74
SCFD1-204ENST00000463622 FLOT1O75955 427 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms