RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 STRA6Q9BX79 667 aa16.85■□□□□ 0.29
SND1-203ENST00000463020 ZDHHC4Q9NPG8 344 aa16.85■□□□□ 0.29
SND1-203ENST00000463020 SIX4Q9UIU6 781 aa16.85■□□□□ 0.29
SND1-203ENST00000463020 AGAP1Q9UPQ3 857 aa16.85■□□□□ 0.29
SND1-203ENST00000463020 ANAPC1Q9H1A4 1944 aa16.85■□□□□ 0.29
SND1-203ENST00000463020 LOC400499M0QZD8 3231 aa16.85■□□□□ 0.29
SND1-203ENST00000463020 PTPRDP23468 1912 aa16.84■□□□□ 0.29
SND1-203ENST00000463020 NUP205Q92621 2012 aa16.84■□□□□ 0.29
SND1-203ENST00000463020 TULP1O00294 542 aaPredicted RBP16.84■□□□□ 0.29
SND1-203ENST00000463020 TBCAO75347 108 aaKnown RBP16.84■□□□□ 0.29
SND1-203ENST00000463020 RHOBTB1O94844 696 aa16.84■□□□□ 0.29
SND1-203ENST00000463020 KRT18P05783 430 aaKnown RBP16.84■□□□□ 0.29
SND1-203ENST00000463020 CKMP06732 381 aa16.84■□□□□ 0.29
SND1-203ENST00000463020 CASP5P51878 434 aa16.84■□□□□ 0.29
SND1-203ENST00000463020 IRX4P78413 519 aa16.84■□□□□ 0.29
SND1-203ENST00000463020 TFAMQ00059 246 aaKnown RBP16.84■□□□□ 0.29
SND1-203ENST00000463020 TSPY1Q01534 308 aa16.84■□□□□ 0.29
SND1-203ENST00000463020 COL9A2Q14055 689 aaPredicted RBP16.84■□□□□ 0.29
SND1-203ENST00000463020 NFKBIBQ15653 356 aa16.84■□□□□ 0.29
SND1-203ENST00000463020 FBXO43Q4G163 708 aa16.84■□□□□ 0.29
SND1-203ENST00000463020 TMEM92Q6UXU6 159 aa16.84■□□□□ 0.29
SND1-203ENST00000463020 ZNF720Q7Z2F6 126 aa16.84■□□□□ 0.29
SND1-203ENST00000463020 RASSF3Q86WH2 238 aa16.84■□□□□ 0.29
SND1-203ENST00000463020 TSTD1Q8NFU3 115 aa16.84■□□□□ 0.29
SND1-203ENST00000463020 RLN3Q8WXF3 142 aa16.84■□□□□ 0.29
SND1-203ENST00000463020 POMGNT1Q8WZA1 660 aa16.84■□□□□ 0.29
SND1-203ENST00000463020 SNX21Q969T3 373 aa16.84■□□□□ 0.29
SND1-203ENST00000463020 ST6GALNAC4Q9H4F1 302 aa16.84■□□□□ 0.29
SND1-203ENST00000463020 ZMYM5Q9UJ78 669 aa16.84■□□□□ 0.29
SND1-203ENST00000463020 PTPRJQ12913 1337 aa16.84■□□□□ 0.29
SND1-203ENST00000463020 GOLGA8IPA6NC78 632 aa16.83■□□□□ 0.28
SND1-203ENST00000463020 GOLGA8JA6NMD2 632 aa16.83■□□□□ 0.28
SND1-203ENST00000463020 UBA7P41226 1012 aa16.83■□□□□ 0.28
SND1-203ENST00000463020 SLC6A11P48066 632 aa16.83■□□□□ 0.28
SND1-203ENST00000463020 IFNAR2P48551 515 aa16.83■□□□□ 0.28
SND1-203ENST00000463020 LMBRD2Q68DH5 695 aaPredicted RBP16.83■□□□□ 0.28
SND1-203ENST00000463020 KIAA1211LQ6NV74 962 aa16.83■□□□□ 0.28
SND1-203ENST00000463020 DYMQ7RTS9 669 aa16.83■□□□□ 0.28
SND1-203ENST00000463020 C12orf40Q86WS4 652 aa16.83■□□□□ 0.28
SND1-203ENST00000463020 SCN4BQ8IWT1 228 aa16.83■□□□□ 0.28
SND1-203ENST00000463020 KDF1Q8NAX2 398 aaPredicted RBP16.83■□□□□ 0.28
SND1-203ENST00000463020 GATA6Q92908 595 aa16.83■□□□□ 0.28
SND1-203ENST00000463020 ATP2A3Q93084 1043 aa16.83■□□□□ 0.28
SND1-203ENST00000463020 CALML4Q96GE6 196 aa16.83■□□□□ 0.28
SND1-203ENST00000463020 AK8Q96MA6 479 aa16.83■□□□□ 0.28
SND1-203ENST00000463020 ACBD6Q9BR61 282 aa16.83■□□□□ 0.28
SND1-203ENST00000463020 FSCN3Q9NQT6 498 aa16.83■□□□□ 0.28
SND1-203ENST00000463020 TBC1D7Q9P0N9 293 aa16.83■□□□□ 0.28
SND1-203ENST00000463020 NME7Q9Y5B8 376 aa16.83■□□□□ 0.28
SND1-203ENST00000463020 HELZP42694 1942 aaKnown RBP16.82■□□□□ 0.28
SND1-203ENST00000463020 SMG1Q96Q15 3661 aaKnown RBP16.82■□□□□ 0.28
SND1-203ENST00000463020 TRAV19A0A0A6YYK7 116 aa16.82■□□□□ 0.28
SND1-203ENST00000463020 SOBPA7XYQ1 873 aa16.82■□□□□ 0.28
SND1-203ENST00000463020 USP17L7P0C7H9 530 aa16.82■□□□□ 0.28
SND1-203ENST00000463020 LMO2P25791 158 aa16.82■□□□□ 0.28
SND1-203ENST00000463020 GJB2P29033 226 aa16.82■□□□□ 0.28
SND1-203ENST00000463020 PSMC1P62191 440 aaKnown RBP16.82■□□□□ 0.28
SND1-203ENST00000463020 NFE2Q16621 373 aaPredicted RBP16.82■□□□□ 0.28
SND1-203ENST00000463020 SOWAHAQ2M3V2 549 aa16.82■□□□□ 0.28
SND1-203ENST00000463020 ARMCX6Q7L4S7 300 aa16.82■□□□□ 0.28
SND1-203ENST00000463020 BRSK2Q8IWQ3 736 aa16.82■□□□□ 0.28
SND1-203ENST00000463020 DEFB124Q8NES8 71 aa16.82■□□□□ 0.28
SND1-203ENST00000463020 KBTBD7Q8WVZ9 684 aa16.82■□□□□ 0.28
SND1-203ENST00000463020 LARP4BQ92615 738 aaKnown RBP16.82■□□□□ 0.28
SND1-203ENST00000463020 ACDQ96AP0 544 aa16.82■□□□□ 0.28
SND1-203ENST00000463020 EPSTI1Q96J88 318 aa16.82■□□□□ 0.28
SND1-203ENST00000463020 ZNF560Q96MR9 790 aa16.82■□□□□ 0.28
SND1-203ENST00000463020 FNBP1Q96RU3 617 aa16.82■□□□□ 0.28
SND1-203ENST00000463020 ADAM33Q9BZ11 813 aa16.82■□□□□ 0.28
SND1-203ENST00000463020 TMEM206Q9H813 350 aa16.82■□□□□ 0.28
SND1-203ENST00000463020 ABCB6Q9NP58 842 aa16.82■□□□□ 0.28
SND1-203ENST00000463020 CRTAC1Q9NQ79 661 aa16.82■□□□□ 0.28
SND1-203ENST00000463020 TMEM74BQ9NUR3 256 aa16.82■□□□□ 0.28
SND1-203ENST00000463020 MBD1Q9UIS9 605 aaPredicted RBP16.82■□□□□ 0.28
SND1-203ENST00000463020 CELSR3Q9NYQ7 3312 aa16.82■□□□□ 0.28
SND1-203ENST00000463020 ATXN2Q99700 1313 aaKnown RBP16.81■□□□□ 0.28
SND1-203ENST00000463020 THADAQ6YHU6 1953 aa16.81■□□□□ 0.28
SND1-203ENST00000463020 GABRDO14764 452 aa16.81■□□□□ 0.28
SND1-203ENST00000463020 IL18RAPO95256 599 aa16.81■□□□□ 0.28
SND1-203ENST00000463020 CYP17A1P05093 508 aa16.81■□□□□ 0.28
SND1-203ENST00000463020 SCP2P22307 547 aa16.81■□□□□ 0.28
SND1-203ENST00000463020 PTGER3P43115 390 aa16.81■□□□□ 0.28
SND1-203ENST00000463020 RPL10AP62906 217 aaKnown RBP16.81■□□□□ 0.28
SND1-203ENST00000463020 AMPD2Q01433 879 aa16.81■□□□□ 0.28
SND1-203ENST00000463020 UAP1L1Q3KQV9 507 aa16.81■□□□□ 0.28
SND1-203ENST00000463020 EMC10Q5UCC4 262 aa16.81■□□□□ 0.28
SND1-203ENST00000463020 SLFN12LQ6IEE8 588 aa16.81■□□□□ 0.28
SND1-203ENST00000463020 CYP2U1Q7Z449 544 aa16.81■□□□□ 0.28
SND1-203ENST00000463020 TTC30AQ86WT1 665 aa16.81■□□□□ 0.28
SND1-203ENST00000463020 ADGRF2Q8IZF7 708 aa16.81■□□□□ 0.28
SND1-203ENST00000463020 OLIG1Q8TAK6 271 aa16.81■□□□□ 0.28
SND1-203ENST00000463020 CNOT6LQ96LI5 555 aaKnown RBP16.81■□□□□ 0.28
SND1-203ENST00000463020 CBWD1Q9BRT8 395 aa16.81■□□□□ 0.28
SND1-203ENST00000463020 SCNM1Q9BWG6 230 aa16.81■□□□□ 0.28
SND1-203ENST00000463020 MTMR12Q9C0I1 747 aa16.81■□□□□ 0.28
SND1-203ENST00000463020 RNF38Q9H0F5 515 aa16.81■□□□□ 0.28
SND1-203ENST00000463020 PDE11AQ9HCR9 933 aa16.81■□□□□ 0.28
SND1-203ENST00000463020 TMEM9BQ9NQ34 198 aa16.81■□□□□ 0.28
SND1-203ENST00000463020 TMEM30AQ9NV96 361 aa16.81■□□□□ 0.28
SND1-203ENST00000463020 ARHGAP26Q9UNA1 814 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms