RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 CSRP2Q16527 193 aa3.59□□□□□ -1.83
HDAC6-212ENST00000461608 MAPKAPK3Q16644 382 aa3.59□□□□□ -1.83
HDAC6-212ENST00000461608 SLC5A9Q2M3M2 681 aa3.59□□□□□ -1.83
HDAC6-212ENST00000461608 SPDYE7PQ495Y7 208 aa3.59□□□□□ -1.83
HDAC6-212ENST00000461608 PLA1AQ53H76 456 aa3.59□□□□□ -1.83
HDAC6-212ENST00000461608 TEDDM1Q5T9Z0 273 aa3.59□□□□□ -1.83
HDAC6-212ENST00000461608 KLHDC7AQ5VTJ3 777 aa3.59□□□□□ -1.83
HDAC6-212ENST00000461608 ZNF354CQ86Y25 554 aa3.59□□□□□ -1.83
HDAC6-212ENST00000461608 SYT12Q8IV01 421 aa3.59□□□□□ -1.83
HDAC6-212ENST00000461608 MAPKAPK5Q8IW41 473 aa3.59□□□□□ -1.83
HDAC6-212ENST00000461608 COLGALT2Q8IYK4 626 aa3.59□□□□□ -1.83
HDAC6-212ENST00000461608 CACNA2D3Q8IZS8 1091 aa3.59□□□□□ -1.83
HDAC6-212ENST00000461608 GCC1Q96CN9 775 aa3.59□□□□□ -1.83
HDAC6-212ENST00000461608 ZG16BQ96DA0 208 aa3.59□□□□□ -1.83
HDAC6-212ENST00000461608 LRRC46Q96FV0 321 aa3.59□□□□□ -1.83
HDAC6-212ENST00000461608 PHACTR3Q96KR7 559 aa3.59□□□□□ -1.83
HDAC6-212ENST00000461608 NAP1L4Q99733 375 aaKnown RBP3.59□□□□□ -1.83
HDAC6-212ENST00000461608 PAGR1Q9BTK6 254 aa3.59□□□□□ -1.83
HDAC6-212ENST00000461608 ZBTB26Q9HCK0 441 aa3.59□□□□□ -1.83
HDAC6-212ENST00000461608 RGL1Q9NZL6 768 aa3.59□□□□□ -1.83
HDAC6-212ENST00000461608 LUZP4Q9P127 313 aa3.59□□□□□ -1.83
HDAC6-212ENST00000461608 CTTNBP2NLQ9P2B4 639 aa3.59□□□□□ -1.83
HDAC6-212ENST00000461608 MTO1Q9Y2Z2 717 aaKnown RBP3.59□□□□□ -1.83
HDAC6-212ENST00000461608 CHST2Q9Y4C5 530 aa3.59□□□□□ -1.83
HDAC6-212ENST00000461608 USP15Q9Y4E8 981 aaPredicted RBP3.59□□□□□ -1.83
HDAC6-212ENST00000461608 CDY1Q9Y6F8 540 aa3.59□□□□□ -1.83
HDAC6-212ENST00000461608 FPGT-TNNI3KV9GXZ4 949 aa3.59□□□□□ -1.83
HDAC6-212ENST00000461608 HMGB1P1B2RPK0 211 aaPredicted RBP3.58□□□□□ -1.84
HDAC6-212ENST00000461608 RAB27BO00194 218 aa3.58□□□□□ -1.84
HDAC6-212ENST00000461608 NPC1O15118 1278 aa3.58□□□□□ -1.84
HDAC6-212ENST00000461608 RRP9O43818 475 aaKnown RBP3.58□□□□□ -1.84
HDAC6-212ENST00000461608 ZNF623O75123 536 aa3.58□□□□□ -1.84
HDAC6-212ENST00000461608 RPS6KA4O75676 772 aa3.58□□□□□ -1.84
HDAC6-212ENST00000461608 PIAS2O75928 621 aa3.58□□□□□ -1.84
HDAC6-212ENST00000461608 FGAP02671 866 aa3.58□□□□□ -1.84
HDAC6-212ENST00000461608 CFIP05156 583 aa3.58□□□□□ -1.84
HDAC6-212ENST00000461608 ITGA5P08648 1049 aa3.58□□□□□ -1.84
HDAC6-212ENST00000461608 BTF3P20290 206 aaKnown RBP3.58□□□□□ -1.84
HDAC6-212ENST00000461608 ACO1P21399 889 aaKnown RBP3.58□□□□□ -1.84
HDAC6-212ENST00000461608 GABRB3P28472 473 aa3.58□□□□□ -1.84
HDAC6-212ENST00000461608 APOBEC3AP31941 199 aaPredicted RBP3.58□□□□□ -1.84
HDAC6-212ENST00000461608 PTDSS1P48651 473 aaKnown RBP3.58□□□□□ -1.84
HDAC6-212ENST00000461608 NDUFV1P49821 464 aa3.58□□□□□ -1.84
HDAC6-212ENST00000461608 DGKEP52429 567 aa3.58□□□□□ -1.84
HDAC6-212ENST00000461608 NANOS3P60323 173 aaKnown RBP3.58□□□□□ -1.84
HDAC6-212ENST00000461608 OCA2Q04671 838 aa3.58□□□□□ -1.84
HDAC6-212ENST00000461608 E2F2Q14209 437 aa3.58□□□□□ -1.84
HDAC6-212ENST00000461608 SPARCL1Q14515 664 aa3.58□□□□□ -1.84
HDAC6-212ENST00000461608 PRKD1Q15139 912 aaPredicted RBP3.58□□□□□ -1.84
HDAC6-212ENST00000461608 RAB30Q15771 203 aa3.58□□□□□ -1.84
HDAC6-212ENST00000461608 PFKFB4Q16877 469 aa3.58□□□□□ -1.84
HDAC6-212ENST00000461608 TRIM71Q2Q1W2 868 aaKnown RBP3.58□□□□□ -1.84
HDAC6-212ENST00000461608 ALFQ53S48 1182 aa3.58□□□□□ -1.84
HDAC6-212ENST00000461608 CERCAMQ5T4B2 595 aa3.58□□□□□ -1.84
HDAC6-212ENST00000461608 FAXCQ5TGI0 409 aa3.58□□□□□ -1.84
HDAC6-212ENST00000461608 TSHZ3Q63HK5 1081 aa3.58□□□□□ -1.84
HDAC6-212ENST00000461608 METRNLQ641Q3 311 aa3.58□□□□□ -1.84
HDAC6-212ENST00000461608 SPTY2D1Q68D10 685 aaPredicted RBP3.58□□□□□ -1.84
HDAC6-212ENST00000461608 PLAG1Q6DJT9 500 aa3.58□□□□□ -1.84
HDAC6-212ENST00000461608 MICALCLQ6ZW33 695 aa3.58□□□□□ -1.84
HDAC6-212ENST00000461608 TMPRSS9Q7Z410 1059 aa3.58□□□□□ -1.84
HDAC6-212ENST00000461608 ANKRD18AQ8IVF6 992 aa3.58□□□□□ -1.84
HDAC6-212ENST00000461608 SPARTQ8N0X7 666 aa3.58□□□□□ -1.84
HDAC6-212ENST00000461608 ZNF808Q8N4W9 903 aaPredicted RBP3.58□□□□□ -1.84
HDAC6-212ENST00000461608 MYCT1Q8N699 235 aa3.58□□□□□ -1.84
HDAC6-212ENST00000461608 Q8TCH9 128 aa3.58□□□□□ -1.84
HDAC6-212ENST00000461608 RAPGEF4Q8WZA2 1011 aa3.58□□□□□ -1.84
HDAC6-212ENST00000461608 SNX19Q92543 992 aa3.58□□□□□ -1.84
HDAC6-212ENST00000461608 RSC1A1Q92681 617 aa3.58□□□□□ -1.84
HDAC6-212ENST00000461608 EID2BQ96D98 161 aa3.58□□□□□ -1.84
HDAC6-212ENST00000461608 ZDHHC12Q96GR4 267 aa3.58□□□□□ -1.84
HDAC6-212ENST00000461608 MARS2Q96GW9 593 aaKnown RBP3.58□□□□□ -1.84
HDAC6-212ENST00000461608 BOD1Q96IK1 185 aa3.58□□□□□ -1.84
HDAC6-212ENST00000461608 FAM227BQ96M60 508 aa3.58□□□□□ -1.84
HDAC6-212ENST00000461608 GDF15Q99988 308 aa3.58□□□□□ -1.84
HDAC6-212ENST00000461608 PTDSS2Q9BVG9 487 aa3.58□□□□□ -1.84
HDAC6-212ENST00000461608 TTYH3Q9C0H2 523 aa3.58□□□□□ -1.84
HDAC6-212ENST00000461608 HELLSQ9NRZ9 838 aa3.58□□□□□ -1.84
HDAC6-212ENST00000461608 TMOD4Q9NZQ9 345 aa3.58□□□□□ -1.84
HDAC6-212ENST00000461608 DNMT3BQ9UBC3 853 aaKnown RBP3.58□□□□□ -1.84
HDAC6-212ENST00000461608 PGAP2Q9UHJ9 254 aa3.58□□□□□ -1.84
HDAC6-212ENST00000461608 NFU1Q9UMS0 254 aa3.58□□□□□ -1.84
HDAC6-212ENST00000461608 NOX1Q9Y5S8 564 aa3.58□□□□□ -1.84
HDAC6-212ENST00000461608 OR2W5A6NFC9 320 aa3.57□□□□□ -1.84
HDAC6-212ENST00000461608 MARCH11A6NNE9 402 aa3.57□□□□□ -1.84
HDAC6-212ENST00000461608 LGALS16A8MUM7 142 aa3.57□□□□□ -1.84
HDAC6-212ENST00000461608 TMEM233B4DJY2 109 aa3.57□□□□□ -1.84
HDAC6-212ENST00000461608 NPIPB8E9PQR5 432 aa3.57□□□□□ -1.84
HDAC6-212ENST00000461608 LEFTY2O00292 366 aa3.57□□□□□ -1.84
HDAC6-212ENST00000461608 RNASET2O00584 256 aaKnown RBP3.57□□□□□ -1.84
HDAC6-212ENST00000461608 ACKR2O00590 384 aa3.57□□□□□ -1.84
HDAC6-212ENST00000461608 DCLK1O15075 740 aa3.57□□□□□ -1.84
HDAC6-212ENST00000461608 PIP5K1CO60331 668 aa3.57□□□□□ -1.84
HDAC6-212ENST00000461608 CCNT2O60583 730 aaKnown RBP3.57□□□□□ -1.84
HDAC6-212ENST00000461608 COQ9O75208 318 aa3.57□□□□□ -1.84
HDAC6-212ENST00000461608 SUN1O94901 812 aa3.57□□□□□ -1.84
HDAC6-212ENST00000461608 PRSS23O95084 383 aa3.57□□□□□ -1.84
HDAC6-212ENST00000461608 ITGA2BP08514 1039 aa3.57□□□□□ -1.84
HDAC6-212ENST00000461608 MST1P26927 711 aa3.57□□□□□ -1.84
HDAC6-212ENST00000461608 CD6P30203 668 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms